BLASTX nr result

ID: Panax21_contig00017738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017738
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   103   1e-20
emb|CAN74881.1| hypothetical protein VITISV_001409 [Vitis vinifera]   103   1e-20
gb|ACL52488.1| unknown [Zea mays]                                      74   2e-11
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/125 (52%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -3

Query: 494 RIGGLSVSXXXXXXXXXXXXXXXXXXXATPVQVIVGSFIADGKKPKSGLS--SPAPPPNM 321
           R GGLSVS                   ATPVQV+VGSFIADGKK  +  S  S APP  M
Sbjct: 230 RTGGLSVSLAGSDGRVLGGGVAGMLTAATPVQVVVGSFIADGKKTNTNQSGSSSAPPAQM 289

Query: 320 LSFGASVPEISHPXXXXXXXXXXXXXXSPLNRGPGPYSNASQPIS--PMYANMGWPNSTM 147
           L+FGA V   S P              SPLNRGP PY+N SQPI   PMYA MGWPNSTM
Sbjct: 290 LNFGAPVVPAS-PSQGGSSESSDENGGSPLNRGPLPYNNVSQPIHQMPMYAAMGWPNSTM 348

Query: 146 SMLPN 132
            MLPN
Sbjct: 349 KMLPN 353


>emb|CAN74881.1| hypothetical protein VITISV_001409 [Vitis vinifera]
          Length = 313

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/125 (52%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -3

Query: 494 RIGGLSVSXXXXXXXXXXXXXXXXXXXATPVQVIVGSFIADGKKPKSGLS--SPAPPPNM 321
           R GGLSVS                   ATPVQV+VGSFIADGKK  +  S  S APP  M
Sbjct: 190 RTGGLSVSLAGSDGRVLGGGVAGMLTAATPVQVVVGSFIADGKKTNTNQSGSSSAPPAQM 249

Query: 320 LSFGASVPEISHPXXXXXXXXXXXXXXSPLNRGPGPYSNASQPIS--PMYANMGWPNSTM 147
           L+FGA V   S P              SPLNRGP PY+N SQPI   PMYA MGWPNSTM
Sbjct: 250 LNFGAPVVPAS-PSQGGSSESSDENGGSPLNRGPLPYNNVSQPIHQMPMYAAMGWPNSTM 308

Query: 146 SMLPN 132
            MLPN
Sbjct: 309 KMLPN 313


>gb|ACL52488.1| unknown [Zea mays]
          Length = 414

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = +1

Query: 307 APKLNMLGG---GAGDDSPDLGFLPSAMKLPTITCTGVAATNIPATPPPKTRPSAPAKDT 477
           APK  + GG   G+       GFL SAMKLPT TCTGVAA +IPAT PP  RPS PA  T
Sbjct: 24  APKTAVCGGTDVGSRLGCSSFGFLASAMKLPTTTCTGVAAISIPATQPPTMRPSLPASAT 83

Query: 478 LRPPIRL 498
           L+PP+ L
Sbjct: 84  LKPPVLL 90


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 51/117 (43%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
 Frame = -3

Query: 497 SRIGGLSVSXXXXXXXXXXXXXXXXXXXATPVQVIVGSFIADGKKP-----KSGLSSPAP 333
           SR GGLSVS                   A+ VQVI+GSFIADGKK      KSG SS  P
Sbjct: 165 SRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSS-TP 223

Query: 332 PPNMLSFGASVPEISHPXXXXXXXXXXXXXXSPLNRGPGPYSNASQPISPMYANMGW 162
           PP ML+FGA +   S P              SP+NR PG Y N SQPI  M     W
Sbjct: 224 PPQMLNFGAPLTTASPPSRGGSSESSDENGGSPVNRTPGIYGNPSQPIHNMQMYQLW 280


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/116 (41%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
 Frame = -3

Query: 497 SRIGGLSVSXXXXXXXXXXXXXXXXXXXATPVQVIVGSFIADGKKPKSGLS----SPAPP 330
           SR GGLSVS                   A+PVQVIVGSFIADGKK  S  S    S  PP
Sbjct: 254 SRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTPP 313

Query: 329 PNMLSFGASVPEISHPXXXXXXXXXXXXXXSPLNRGPGPYSNASQPISPMYANMGW 162
           P ML+F A +   S P              SP+NR PG Y N +Q I  M     W
Sbjct: 314 PQMLNFSAPLTTASPPSQGGSSDSSDENGGSPVNRNPGIYGNPNQSIHNMQMYQLW 369


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