BLASTX nr result

ID: Panax21_contig00017734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017734
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523660.1| conserved hypothetical protein [Ricinus comm...    67   3e-09
ref|XP_002303350.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_003594889.1| hypothetical protein MTR_2g035850 [Medicago ...    61   3e-07
ref|XP_002326449.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
gb|AFK40380.1| unknown [Medicago truncatula]                           59   1e-06

>ref|XP_002523660.1| conserved hypothetical protein [Ricinus communis]
           gi|223537112|gb|EEF38746.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
 Frame = -1

Query: 767 MNDT-NPNSTQWLHYYHEPTASVNPVVAVTS----GVXXXXXXXXXXXXXXXXXXXSAIS 603
           M+DT  P+ST+W H +++ T     VV+ +S    G                    S +S
Sbjct: 1   MSDTVTPSSTEWFHPFYDQTIH-GQVVSSSSCFGFGFSSDSTMVTATTTSSSCASDSLLS 59

Query: 602 SPNNSTSMLSGTNHLNPQGGGSVXXXXXXXXXXXXXXXTTLLNASTTNFRSLVQQFTGCD 423
           SP+ ST+   G   L P+G   V                TLLNA+T+NFR+LVQQFTGC 
Sbjct: 60  SPSCSTTANGG--QLTPKG--VVSKPIRRRSRASKKTPITLLNANTSNFRTLVQQFTGCS 115

Query: 422 NTYEGSNSFGTQKGPLNLSFGMPRNQNEH 336
           +      SFG QKGP+NL+F +   QN +
Sbjct: 116 SR---PTSFGNQKGPINLNFRLGSVQNHN 141


>ref|XP_002303350.1| predicted protein [Populus trichocarpa] gi|222840782|gb|EEE78329.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = -1

Query: 608 ISSPNNSTSMLS-GTNHLNPQGGGSVXXXXXXXXXXXXXXXTTLLNASTTNFRSLVQQFT 432
           I +PN+S+   S G   L PQG   V                TL+NAST NFR+LVQQFT
Sbjct: 47  IINPNSSSITSSTGDQRLTPQG--CVSKPVTRRSRASKKTPATLINASTANFRALVQQFT 104

Query: 431 GCDNTYEGSNSFGTQKGPLNLSFGMPRNQNEHHNQQVLGTSSSSRIAPFGCGFYN 267
           GC  +   S SFG+ KGP+NL+FG+   QN         + +++   P G  +Y+
Sbjct: 105 GCPPS--TSISFGSHKGPINLNFGLGSAQNH--------SCATAETEPLGNSYYH 149


>ref|XP_003594889.1| hypothetical protein MTR_2g035850 [Medicago truncatula]
           gi|355483937|gb|AES65140.1| hypothetical protein
           MTR_2g035850 [Medicago truncatula]
          Length = 233

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = -1

Query: 608 ISSPNNSTSMLSGTNHLNPQGGGSVXXXXXXXXXXXXXXXTTLLNASTTNFRSLVQQFTG 429
           I SP NS +  S  + L P+GG ++               TTLLNA+TTNFR LVQQFTG
Sbjct: 47  ILSPTNSYTNTS--DQLTPKGG-NISKPIRRRSRASKRTPTTLLNANTTNFRQLVQQFTG 103

Query: 428 C-DNTYEGSNSFGTQKGPLNLSFGM-PRNQNEHHN 330
           C   T   S+S G  KGP+ L+F      QN  H+
Sbjct: 104 CPSTTLSSSSSLGVHKGPITLNFQQGSSKQNVQHD 138


>ref|XP_002326449.1| predicted protein [Populus trichocarpa] gi|222833771|gb|EEE72248.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 40/116 (34%), Positives = 61/116 (52%)
 Frame = -1

Query: 608 ISSPNNSTSMLSGTNHLNPQGGGSVXXXXXXXXXXXXXXXTTLLNASTTNFRSLVQQFTG 429
           I +P++S +  +G   L P+G GS                +TLL A+T NFR+LVQQFTG
Sbjct: 41  IINPSSSITSSAGDQTLTPKGCGS--KPIKRRSRASKKTPSTLLTATTANFRALVQQFTG 98

Query: 428 CDNTYEGSNSFGTQKGPLNLSFGMPRNQNEHHNQQVLGTSSSSRIAPFGCGFYNPQ 261
           C +      S G QKGP+ L+FG+   Q+  +        +++ +APF   +Y+ Q
Sbjct: 99  CPS---NPISIGNQKGPITLNFGLGSAQDHSY--------ATAEMAPFDNIYYHGQ 143


>gb|AFK40380.1| unknown [Medicago truncatula]
          Length = 237

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = -1

Query: 608 ISSPNNSTSMLSGTNHLNPQGGGSVXXXXXXXXXXXXXXXTTLLNASTTNFRSLVQQFTG 429
           I SP NS +  S  + L P+GG ++               TTLLNA+T NFR LVQQFTG
Sbjct: 51  ILSPTNSYTNTS--DQLTPKGG-NISKPIRRRSRASKRTPTTLLNANTANFRQLVQQFTG 107

Query: 428 C-DNTYEGSNSFGTQKGPLNLSFGM-PRNQNEHHN 330
           C   T   S+S G  KGP+ L+F      QN  H+
Sbjct: 108 CPSTTLSSSSSLGVHKGPITLNFQQGSSKQNVQHD 142


Top