BLASTX nr result

ID: Panax21_contig00017725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017725
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533811.1| methylenetetrahydrofolate dehydrogenase, put...   529   e-148
ref|XP_002302571.1| tetrahydrofolate dehydrogenase/cyclohydrolas...   527   e-147
ref|XP_002269224.1| PREDICTED: bifunctional protein FolD [Vitis ...   525   e-146
ref|XP_003623888.1| Bifunctional protein folD [Medicago truncatu...   520   e-145
ref|XP_002872936.1| hypothetical protein ARALYDRAFT_490506 [Arab...   518   e-144

>ref|XP_002533811.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
            gi|223526248|gb|EEF28564.1| methylenetetrahydrofolate
            dehydrogenase, putative [Ricinus communis]
          Length = 366

 Score =  529 bits (1363), Expect = e-148
 Identities = 279/371 (75%), Positives = 305/371 (82%), Gaps = 3/371 (0%)
 Frame = +1

Query: 127  VSMMIFTDCSSSASTARLLPFN---TLHKFPNTLLHFRRSIPLQFGIKNPNXXXXXXXXX 297
            ++ + FTDCSSSA T RL  FN   T H+  N  + F R +     ++            
Sbjct: 1    MASVTFTDCSSSA-TPRLRLFNRTATFHR--NGSITFARRLAGPLSVRT--ICFGTVSIG 55

Query: 298  XXXXXXXXVYCATLMATEASAKVIDGKSVAKDIRNEIAAEISRMKNAVGVVPGLAVILVG 477
                    V  A+ MA+E  AKVIDGK VA  IR EI  E+SRMK+ +GVVPGLAVILVG
Sbjct: 56   SSSTASSPVINAS-MASETGAKVIDGKLVAMKIREEITVEVSRMKDEIGVVPGLAVILVG 114

Query: 478  DRKDSATYVRNKKKACESVGINSYEVCLPEDATEQEVLKHISSYNDDPAVHGILVQLPLP 657
            DRKDSATYVRNKKKAC+SVGINS+E  LPED+TEQEVLK IS +N DP+VHGILVQLPLP
Sbjct: 115  DRKDSATYVRNKKKACDSVGINSFEANLPEDSTEQEVLKFISGFNSDPSVHGILVQLPLP 174

Query: 658  SHMNEQNILNAVGIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVDIKGK 837
            SHMN+QNILNAV IEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGV+IKGK
Sbjct: 175  SHMNDQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVEIKGK 234

Query: 838  RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIVKQADIIISAVGQPNMVRGTW 1017
            RAVVIGRSNIVGMPAAL+LQREDATVSIVHSRTKNPEEI +QADIIISAVGQPNMVRG W
Sbjct: 235  RAVVIGRSNIVGMPAALMLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGNW 294

Query: 1018 IKTGAVIIDVGINPVEDPQSSRGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSN 1197
            IK GAV+IDVGINPVED +S RGYRLVGD+CYEEACKVASA+TPVPGGVGPMTIAMLLSN
Sbjct: 295  IKPGAVVIDVGINPVEDAKSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSN 354

Query: 1198 TLTSAKRTHNF 1230
            TLTSAKR HNF
Sbjct: 355  TLTSAKRVHNF 365


>ref|XP_002302571.1| tetrahydrofolate dehydrogenase/cyclohydrolase [Populus trichocarpa]
            gi|222844297|gb|EEE81844.1| tetrahydrofolate
            dehydrogenase/cyclohydrolase [Populus trichocarpa]
          Length = 367

 Score =  527 bits (1357), Expect = e-147
 Identities = 273/368 (74%), Positives = 305/368 (82%), Gaps = 1/368 (0%)
 Frame = +1

Query: 130  SMMIFTDCSSSASTARLLPFNTLHKFPNTLLHFRRSI-PLQFGIKNPNXXXXXXXXXXXX 306
            S ++F D SS+++ + LLPF+ +    N  +  RRS+ PL      P             
Sbjct: 3    SSLVFID-SSTSTASHLLPFSRISTPFNGAVSLRRSVGPLNV---RPFVLSPLRTLSVNS 58

Query: 307  XXXXXVYCATLMATEASAKVIDGKSVAKDIRNEIAAEISRMKNAVGVVPGLAVILVGDRK 486
                          EASAKVIDGK VAK IR+EI AE+ +MK A+GVVPGLAVILVGDRK
Sbjct: 59   SNNPSPVINDKSGGEASAKVIDGKMVAKQIRDEITAEVLKMKEAIGVVPGLAVILVGDRK 118

Query: 487  DSATYVRNKKKACESVGINSYEVCLPEDATEQEVLKHISSYNDDPAVHGILVQLPLPSHM 666
            DSATYVRNKKKACESVGINS+EV LPED+TEQEV+K IS +N+DP+VHGILVQLPLPSHM
Sbjct: 119  DSATYVRNKKKACESVGINSFEVRLPEDSTEQEVIKFISEFNNDPSVHGILVQLPLPSHM 178

Query: 667  NEQNILNAVGIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVDIKGKRAV 846
            +EQN+LNAV IEKDVDGFHPLNIGRLAMRGR+PLFVPCTPKGCIELLHRY V+IKGKRAV
Sbjct: 179  DEQNVLNAVDIEKDVDGFHPLNIGRLAMRGRDPLFVPCTPKGCIELLHRYDVEIKGKRAV 238

Query: 847  VIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIVKQADIIISAVGQPNMVRGTWIKT 1026
            VIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI+K ADIIISAVGQPNMVRG+W+K 
Sbjct: 239  VIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIIKHADIIISAVGQPNMVRGSWLKP 298

Query: 1027 GAVIIDVGINPVEDPQSSRGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNTLT 1206
            GAV+IDVGINPVED  S RGY+LVGD+CYEEACKVASA+TPVPGGVGPMTIAMLLSNTL+
Sbjct: 299  GAVVIDVGINPVEDANSPRGYKLVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLS 358

Query: 1207 SAKRTHNF 1230
            SAKRTHNF
Sbjct: 359  SAKRTHNF 366


>ref|XP_002269224.1| PREDICTED: bifunctional protein FolD [Vitis vinifera]
            gi|297745230|emb|CBI40310.3| unnamed protein product
            [Vitis vinifera]
          Length = 389

 Score =  525 bits (1352), Expect = e-146
 Identities = 279/389 (71%), Positives = 303/389 (77%), Gaps = 22/389 (5%)
 Frame = +1

Query: 130  SMMIFTDCSSSAST-----ARLLPFNTLHKFPNTLLHFRRSIPL------QFGIKN---- 264
            S M F DCS+SA T     +RL P   L   P    H  R +P+         I N    
Sbjct: 3    SSMAFADCSTSAPTRTFLFSRLRPRRGLPSIPP---HLLRGLPVAGFRLPSLRITNSPSS 59

Query: 265  -PNXXXXXXXXXXXXXXXXXVYCATLMA------TEASAKVIDGKSVAKDIRNEIAAEIS 423
             P                     A++ A      TEASA VIDGKS+AK+IR+EI  EIS
Sbjct: 60   FPKGNAFLRNKQGFRHFRPFTVLASVSASEAAISTEASAMVIDGKSIAKEIRHEITTEIS 119

Query: 424  RMKNAVGVVPGLAVILVGDRKDSATYVRNKKKACESVGINSYEVCLPEDATEQEVLKHIS 603
            RMK+ +GV+PGLAVILVGDRKDS TYVRNKKKACESVGI SYEVCLPED+TE+EVLK IS
Sbjct: 120  RMKDEIGVIPGLAVILVGDRKDSTTYVRNKKKACESVGIKSYEVCLPEDSTEEEVLKFIS 179

Query: 604  SYNDDPAVHGILVQLPLPSHMNEQNILNAVGIEKDVDGFHPLNIGRLAMRGREPLFVPCT 783
             +NDDP VHGILVQLPLPSHMNEQNILNAV IEKDVDGFHPLNIGRLAMRGREPLFVPCT
Sbjct: 180  GFNDDPEVHGILVQLPLPSHMNEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCT 239

Query: 784  PKGCIELLHRYGVDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIVKQ 963
            PKGCIELLHR  +DIKGK+AVVIGRSNIVGMPAALLL REDATVSIVHSRTKNPEE+  Q
Sbjct: 240  PKGCIELLHRCNIDIKGKQAVVIGRSNIVGMPAALLLLREDATVSIVHSRTKNPEEVTSQ 299

Query: 964  ADIIISAVGQPNMVRGTWIKTGAVIIDVGINPVEDPQSSRGYRLVGDICYEEACKVASAI 1143
            ADIII+AVGQPNMVRG+WIK GAVIIDVGINPVED  S RGYRLVGD+CYEEACK+ASA+
Sbjct: 300  ADIIIAAVGQPNMVRGSWIKPGAVIIDVGINPVEDATSPRGYRLVGDVCYEEACKIASAV 359

Query: 1144 TPVPGGVGPMTIAMLLSNTLTSAKRTHNF 1230
            TPVPGGVGPMTIAMLLSNTL+SAKR HNF
Sbjct: 360  TPVPGGVGPMTIAMLLSNTLSSAKRMHNF 388


>ref|XP_003623888.1| Bifunctional protein folD [Medicago truncatula]
            gi|355498903|gb|AES80106.1| Bifunctional protein folD
            [Medicago truncatula]
          Length = 351

 Score =  520 bits (1340), Expect = e-145
 Identities = 259/298 (86%), Positives = 280/298 (93%), Gaps = 1/298 (0%)
 Frame = +1

Query: 343  ATEAS-AKVIDGKSVAKDIRNEIAAEISRMKNAVGVVPGLAVILVGDRKDSATYVRNKKK 519
            ATEAS AKVIDGK+VAK IR+EIA E+SRM+ A GV+PGLAVILVGDRKDSATYVRNKKK
Sbjct: 54   ATEASSAKVIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKK 113

Query: 520  ACESVGINSYEVCLPEDATEQEVLKHISSYNDDPAVHGILVQLPLPSHMNEQNILNAVGI 699
            ACE+VGINS EV LPED+TE+EVL HI+ YNDDP+VHGILVQLPLPSHMNEQN+LNAV I
Sbjct: 114  ACETVGINSLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRI 173

Query: 700  EKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVDIKGKRAVVIGRSNIVGMP 879
            EKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGV IKGKRAVVIGRSNIVGMP
Sbjct: 174  EKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVSIKGKRAVVIGRSNIVGMP 233

Query: 880  AALLLQREDATVSIVHSRTKNPEEIVKQADIIISAVGQPNMVRGTWIKTGAVIIDVGINP 1059
            AALLLQREDATVSIVHSRT NPEEI++QADIII+AVGQPNMV+G+WIK GAVIIDVGINP
Sbjct: 234  AALLLQREDATVSIVHSRTTNPEEIIRQADIIIAAVGQPNMVKGSWIKPGAVIIDVGINP 293

Query: 1060 VEDPQSSRGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNTLTSAKRTHNFD 1233
            V+DP SSRGY+LVGD+CYEEA KVASAITPVPGGVGPMTIAMLL NTL SAKR H+F+
Sbjct: 294  VDDPSSSRGYKLVGDVCYEEAVKVASAITPVPGGVGPMTIAMLLQNTLISAKRIHSFE 351


>ref|XP_002872936.1| hypothetical protein ARALYDRAFT_490506 [Arabidopsis lyrata subsp.
            lyrata] gi|297318773|gb|EFH49195.1| hypothetical protein
            ARALYDRAFT_490506 [Arabidopsis lyrata subsp. lyrata]
          Length = 361

 Score =  518 bits (1334), Expect = e-144
 Identities = 267/368 (72%), Positives = 306/368 (83%)
 Frame = +1

Query: 127  VSMMIFTDCSSSASTARLLPFNTLHKFPNTLLHFRRSIPLQFGIKNPNXXXXXXXXXXXX 306
            ++ ++FTDCSSS +T+RL+  N   +   T L  R+ +     ++               
Sbjct: 1    MASLMFTDCSSS-TTSRLIHLN---RRSGTFL-LRQCVGQ---LRLQTTASGRGCCICSS 52

Query: 307  XXXXXVYCATLMATEASAKVIDGKSVAKDIRNEIAAEISRMKNAVGVVPGLAVILVGDRK 486
                    A   ++E  A VIDGK+VAK IR+EI  E+SRMK ++GV+PGLAVILVGDRK
Sbjct: 53   SSPISAISADTKSSEGVAIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRK 112

Query: 487  DSATYVRNKKKACESVGINSYEVCLPEDATEQEVLKHISSYNDDPAVHGILVQLPLPSHM 666
            DSATYVRNKKKAC+SVGI S+EVCL ED++E+EVLK +S++N DP+VHGILVQLPLPSHM
Sbjct: 113  DSATYVRNKKKACDSVGIKSFEVCLAEDSSEEEVLKSVSAFNGDPSVHGILVQLPLPSHM 172

Query: 667  NEQNILNAVGIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGVDIKGKRAV 846
            +EQNILNAV IEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRY ++IKGKRAV
Sbjct: 173  DEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNIEIKGKRAV 232

Query: 847  VIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIVKQADIIISAVGQPNMVRGTWIKT 1026
            VIGRSNIVGMPAALLLQREDATVSI+HSRTKNPEEI ++ADIII+AVGQPNMVRG+WIK 
Sbjct: 233  VIGRSNIVGMPAALLLQREDATVSIIHSRTKNPEEITREADIIIAAVGQPNMVRGSWIKP 292

Query: 1027 GAVIIDVGINPVEDPQSSRGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNTLT 1206
            GAVIIDVGINPVEDP ++RGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNTLT
Sbjct: 293  GAVIIDVGINPVEDPSAARGYRLVGDICYEEACKVASAITPVPGGVGPMTIAMLLSNTLT 352

Query: 1207 SAKRTHNF 1230
            SAKR HNF
Sbjct: 353  SAKRIHNF 360


Top