BLASTX nr result

ID: Panax21_contig00017717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017717
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...   208   4e-52
ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2...   207   6e-52
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   207   1e-51
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...   204   6e-51
ref|XP_002321881.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50

>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           48-like [Cucumis sativus]
          Length = 432

 Score =  208 bits (529), Expect = 4e-52
 Identities = 94/117 (80%), Positives = 106/117 (90%)
 Frame = +3

Query: 177 VWSLETLQCVQTLTEHTSVVMSVLCWDQFLLSCSLDKTIKVWVTAESGNLEVTYTHNEEH 356
           VWSLE+LQC+QTLT+HTSVVMSVLCW+QFLLSCSLDKTIKVW   ESGNLEVTYT  E+H
Sbjct: 292 VWSLESLQCLQTLTDHTSVVMSVLCWEQFLLSCSLDKTIKVWAATESGNLEVTYTQKEDH 351

Query: 357 GLLTFCGMHDAEAKPVVLCSSIDNSIRVYDLPSFSERGKIYSKEEVRSIQIGPGGLF 527
           GLLT CGMHD + KP++LCS  DNS+R+YDLPSFSERGKIYSKEE+RSIQ GPGG+F
Sbjct: 352 GLLTLCGMHDLDGKPILLCSCNDNSVRLYDLPSFSERGKIYSKEEIRSIQAGPGGIF 408


>ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  207 bits (528), Expect = 6e-52
 Identities = 92/117 (78%), Positives = 108/117 (92%)
 Frame = +3

Query: 177 VWSLETLQCVQTLTEHTSVVMSVLCWDQFLLSCSLDKTIKVWVTAESGNLEVTYTHNEEH 356
           VWSLETLQC+QTLT+HTSVVMS+LCW+QFLLSCSLD+TIKVW   ESGNLEVT+THNEEH
Sbjct: 314 VWSLETLQCIQTLTDHTSVVMSLLCWEQFLLSCSLDQTIKVWAATESGNLEVTFTHNEEH 373

Query: 357 GLLTFCGMHDAEAKPVVLCSSIDNSIRVYDLPSFSERGKIYSKEEVRSIQIGPGGLF 527
           GLLT CGMHD E KPV+LCSS DNS+ +YDLPSFSE+GK+++K+E+R+IQ GPGGLF
Sbjct: 374 GLLTLCGMHDPEGKPVLLCSSNDNSVHLYDLPSFSEKGKMFAKQEIRAIQTGPGGLF 430


>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223549969|gb|EEF51456.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 445

 Score =  207 bits (526), Expect = 1e-51
 Identities = 94/117 (80%), Positives = 106/117 (90%)
 Frame = +3

Query: 177 VWSLETLQCVQTLTEHTSVVMSVLCWDQFLLSCSLDKTIKVWVTAESGNLEVTYTHNEEH 356
           VW+LETLQCVQTLT+HTSVVMSVLCWDQFLLSCSLD+ IKVW   ESGNL+VTYTHNEEH
Sbjct: 307 VWNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTYTHNEEH 366

Query: 357 GLLTFCGMHDAEAKPVVLCSSIDNSIRVYDLPSFSERGKIYSKEEVRSIQIGPGGLF 527
           GLLT CGMHD E KPV+LCS  DNS+R+ DLPSFSERGKI++K+E+R+IQ GPGGLF
Sbjct: 367 GLLTLCGMHDLEGKPVLLCSCNDNSVRLLDLPSFSERGKIFAKQEIRAIQTGPGGLF 423


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
           vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 177 VWSLETLQCVQTLTEHTSVVMSVLCWDQFLLSCSLDKTIKVWVTAESGNLEVTYTHNEEH 356
           VW+LE LQC+QTLTEHTSVVMS+LCWDQFLLSCSLD T+KVWV  ESGNLEVTYTHNEE 
Sbjct: 304 VWNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLEVTYTHNEEQ 363

Query: 357 GLLTFCGMHDAEAKPVVLCSSIDNSIRVYDLPSFSERGKIYSKEEVRSIQIGPGGLF 527
           G+L  CGMHD EAKPV+LCS  DN++RVYDLPSFSERGKI+++E +R+IQIGPGGLF
Sbjct: 364 GVLYLCGMHDPEAKPVLLCSCNDNTVRVYDLPSFSERGKIFAREGIRAIQIGPGGLF 420


>ref|XP_002321881.1| predicted protein [Populus trichocarpa] gi|222868877|gb|EEF06008.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  202 bits (514), Expect = 2e-50
 Identities = 90/117 (76%), Positives = 106/117 (90%)
 Frame = +3

Query: 177 VWSLETLQCVQTLTEHTSVVMSVLCWDQFLLSCSLDKTIKVWVTAESGNLEVTYTHNEEH 356
           VWSLETLQCVQTL +HTSVVMS+LCW+QFLLSCSLD+TIKVW   ESGNLEVTYTH EEH
Sbjct: 199 VWSLETLQCVQTLKDHTSVVMSLLCWEQFLLSCSLDQTIKVWAATESGNLEVTYTHKEEH 258

Query: 357 GLLTFCGMHDAEAKPVVLCSSIDNSIRVYDLPSFSERGKIYSKEEVRSIQIGPGGLF 527
           GLLT CGMHD E KP++LCSS D+S+ ++DLPSFSE+GKI++K+E+R+IQ GPGGLF
Sbjct: 259 GLLTLCGMHDLEGKPILLCSSNDSSVHLFDLPSFSEKGKIFAKQEIRAIQTGPGGLF 315


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