BLASTX nr result
ID: Panax21_contig00017696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017696
(547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247... 112 3e-23
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu... 91 9e-17
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu... 85 8e-15
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p... 84 1e-14
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793... 57 2e-06
>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
Length = 2355
Score = 112 bits (281), Expect = 3e-23
Identities = 79/187 (42%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Frame = -1
Query: 547 LKKKKRRVHTFQQFPRDIVGTSDNFQSGLRGGNVGSTSLLLATPPFPRLPLSTAGTSGLP 368
LKKKKRR H ++ D+ GTS NFQS L G N S+S+ LA PPFP LP +TAG SGLP
Sbjct: 2142 LKKKKRRSHVLRRLSGDVAGTSWNFQSSLHGENFASSSVPLA-PPFPLLPQNTAGASGLP 2200
Query: 367 WMEPDXXXXXXXXXXXXXXXXXSVFSNIQKNRSTGMTPSPEVLQLV------XXXXXXXX 206
W+EP+ S F QK +STG++PSPEVLQLV
Sbjct: 2201 WIEPNLNLPPLNINMMNPSSSSS-FLKPQK-KSTGLSPSPEVLQLVASCVAPGPHIPPVP 2258
Query: 205 XXXXXXXXXXKIPLPNSIDQVMAPVLKDTCDKNMDKQTSPVAMSGPQTEEKPEQSKSGDS 26
K+PLP ID+ P KQTS +++ P +E+ EQ +SGDS
Sbjct: 2259 GMPSSGFLDSKLPLPKFIDRGEFPDSTGASGNQKGKQTSTLSVHAPLNQERREQIESGDS 2318
Query: 25 SN-TQSD 8
S+ TQSD
Sbjct: 2319 SSKTQSD 2325
>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222871157|gb|EEF08288.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2332
Score = 91.3 bits (225), Expect = 9e-17
Identities = 71/190 (37%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Frame = -1
Query: 544 KKKKRRVHTFQQFPRDIVGTSDNFQSGLRGGNVGSTSLLLATPPFPRLPLSTAGTSGLPW 365
KKKKRR H F+QFP DI G+S +F++ + G NV STS+ P++P TSG PW
Sbjct: 2130 KKKKRRSHMFRQFPLDIGGSSQDFRNSIHGSNVASTSI-------PQVPPLVHETSG-PW 2181
Query: 364 MEPDXXXXXXXXXXXXXXXXXSVFSNIQKNRSTGMTPSPEVLQLV------XXXXXXXXX 203
E D S + NIQK + G++PSPEVLQLV
Sbjct: 2182 NESD-FNLPLPSLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVASCVAPGPHLSSGSG 2240
Query: 202 XXXXXXXXXKIPLPNSIDQVMAPVLKDTCDKNMDKQTSPVAMSGPQT----EEKPEQSKS 35
K+PLP S DQV ++ MD + SP PQ E++ +Q S
Sbjct: 2241 ATSASLHESKVPLPKSPDQVGISDPLGALEEPMDTERSP-----PQVQCIPEKRLDQPDS 2295
Query: 34 GDSSNTQSDL 5
GDSS T+SDL
Sbjct: 2296 GDSSKTESDL 2305
>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222840937|gb|EEE78484.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2327
Score = 84.7 bits (208), Expect = 8e-15
Identities = 65/185 (35%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Frame = -1
Query: 544 KKKKRRVHTFQQFPRDIVGTSDNFQSGLRGGNVGSTSLLLATPPFPRLPLSTAGTSGLPW 365
KKKKRR H F+QFP D G++ +F+ G+ G NV STS+ P P +P TSG PW
Sbjct: 2129 KKKKRRSHMFRQFPLDTGGSTQDFRYGIHGCNVASTSI-----PPPLVP----ETSGRPW 2179
Query: 364 MEPDXXXXXXXXXXXXXXXXXSVFSNIQKNRSTGMTPSPEVLQLV------XXXXXXXXX 203
E D S + N+QK + G++PSPEVLQLV
Sbjct: 2180 NESD-LNLPLPSLSKMNSLTSSAYLNVQKKTTMGLSPSPEVLQLVASCVAPGPHLTSGSG 2238
Query: 202 XXXXXXXXXKIPLPNSIDQVMAPVLKDTCDKNMDKQTSPVAMSGPQTEEKPEQSKSGDSS 23
K+P+ S DQV + D+ +D + P + E++P+Q SGDSS
Sbjct: 2239 TTSSSIHESKVPMRKSPDQV---GMSDS-QVALDTERLPPQVQSMLPEKRPDQPDSGDSS 2294
Query: 22 NTQSD 8
T+SD
Sbjct: 2295 KTESD 2299
>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223537108|gb|EEF38742.1| chromodomain
helicase DNA binding protein, putative [Ricinus communis]
Length = 2257
Score = 84.3 bits (207), Expect = 1e-14
Identities = 64/182 (35%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Frame = -1
Query: 544 KKKKRRVHTFQQFPRDIVGTSDNFQSGLRGGNVGSTSLLLATPPFPRLPLSTAGTSGLPW 365
KKKKRR H F+QFP D G+ NF+S + G N+ S+S+ A P F L L GTSG
Sbjct: 2048 KKKKRRSHMFRQFPLDTAGSMQNFRSSILGSNIASSSIPPA-PTFQPLQLLPPGTSG--H 2104
Query: 364 MEPDXXXXXXXXXXXXXXXXXSVFSNIQKNRSTGMTPSPEVLQLV------XXXXXXXXX 203
D S +S + K S G++PSPEVLQLV
Sbjct: 2105 TRNDSDPNEHFRNLDMINSLTSSYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSSSSG 2164
Query: 202 XXXXXXXXXKIPLPNSIDQVMAPVLKDTCDKNMDKQTSPVAMSGPQTEEKPEQSKSGDSS 23
K+PLP S+D+V + +K+ D Q P EEKP Q GDSS
Sbjct: 2165 MTSSSFLESKLPLPKSVDEVGVSDAQGAEEKDKDMQGLPPDTQIILPEEKPGQPDDGDSS 2224
Query: 22 NT 17
+
Sbjct: 2225 KS 2226
>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
Length = 2325
Score = 56.6 bits (135), Expect = 2e-06
Identities = 57/184 (30%), Positives = 72/184 (39%), Gaps = 5/184 (2%)
Frame = -1
Query: 544 KKKKRRVHTFQQFPRDIVGTSDNFQSGLRGGNVGSTSLLLATPPFPRLPL-STAGTSGLP 368
KKKKRR H F + D G S + N S+SL L P LPL S G G
Sbjct: 2126 KKKKRRSHKFSRGLPDFAGNSRDLHRSHHVDNGASSSLPLG----PSLPLLSHTGALGTQ 2181
Query: 367 WMEPDXXXXXXXXXXXXXXXXXSVFSNIQKNRSTGMTPSPEVLQL----VXXXXXXXXXX 200
+E D S+ K S+G++PSPEVLQL V
Sbjct: 2182 QIESDLNLPPLNLKVASS-------SHSSKKASSGLSPSPEVLQLVASCVAPGPHLPSIT 2234
Query: 199 XXXXXXXXKIPLPNSIDQVMAPVLKDTCDKNMDKQTSPVAMSGPQTEEKPEQSKSGDSSN 20
K+PLP + + + +Q SP PQ E++ SGDSS
Sbjct: 2235 GASNFLDSKLPLPRPVGRAKFKDSEGAFRNKNPRQVSPKIWCPPQ-EQEVHDLDSGDSSK 2293
Query: 19 TQSD 8
TQSD
Sbjct: 2294 TQSD 2297