BLASTX nr result

ID: Panax21_contig00017679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017679
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306301.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
gb|AAZ67614.1| 80A08_29 [Brassica rapa subsp. pekinensis]              75   5e-12
ref|XP_003635301.1| PREDICTED: uncharacterized protein LOC100853...    74   2e-11
emb|CBI29446.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002532872.1| conserved hypothetical protein [Ricinus comm...    74   2e-11

>ref|XP_002306301.1| predicted protein [Populus trichocarpa] gi|222855750|gb|EEE93297.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 516 LDPKLSMNYQRRCEEATCEGGKKLGPPLGTWNIPPVIEDEDLYRSEHLNYKPLV 355
           LDP+LS NYQRRCEEAT EGGK  G PLG+WNIPP I DE+LYRS  LN + +V
Sbjct: 344 LDPQLSTNYQRRCEEATKEGGKMSGYPLGSWNIPPAIVDEELYRSNWLNSESVV 397


>gb|AAZ67614.1| 80A08_29 [Brassica rapa subsp. pekinensis]
          Length = 402

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/47 (74%), Positives = 36/47 (76%)
 Frame = -1

Query: 516 LDPKLSMNYQRRCEEATCEGGKKLGPPLGTWNIPPVIEDEDLYRSEH 376
           LDP LS NYQRRCEEAT EGGK  GP LGTWNIP VI DE  YR+ H
Sbjct: 355 LDPHLSSNYQRRCEEATKEGGKVSGPLLGTWNIPAVISDEGAYRAAH 401


>ref|XP_003635301.1| PREDICTED: uncharacterized protein LOC100853304 [Vitis vinifera]
          Length = 95

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = -1

Query: 516 LDPKLSMNYQRRCEEATCEGGKKLGPPLGTWNIPPVIEDEDLYRSEHLNYKPLVSP 349
           LDP+LS  Y+RRCEEAT EGGK  G  LGTW++PPVI DEDLYRS  L+ +  + P
Sbjct: 33  LDPQLSSKYRRRCEEATKEGGKISGHALGTWSMPPVIVDEDLYRSNVLSSRSTMVP 88


>emb|CBI29446.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = -1

Query: 516 LDPKLSMNYQRRCEEATCEGGKKLGPPLGTWNIPPVIEDEDLYRSEHLNYKPLVSP 349
           LDP+LS  Y+RRCEEAT EGGK  G  LGTW++PPVI DEDLYRS  L+ +  + P
Sbjct: 56  LDPQLSSKYRRRCEEATKEGGKISGHALGTWSMPPVIVDEDLYRSNVLSSRSTMVP 111


>ref|XP_002532872.1| conserved hypothetical protein [Ricinus communis]
           gi|223527357|gb|EEF29501.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -1

Query: 516 LDPKLSMNYQRRCEEATCEGGKKLGPPLGTWNIPPVIEDEDLYRS 382
           LDP+LS++YQRRCEEAT EGGK  G P GTW+IPPVI DE+L+RS
Sbjct: 154 LDPQLSLSYQRRCEEATREGGKISGHPFGTWSIPPVIVDEELHRS 198


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