BLASTX nr result

ID: Panax21_contig00017675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017675
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   630   e-178
ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-li...   551   e-154
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   550   e-154
ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-li...   547   e-153
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   538   e-150

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
            gi|296084279|emb|CBI24667.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  630 bits (1624), Expect = e-178
 Identities = 327/445 (73%), Positives = 369/445 (82%), Gaps = 6/445 (1%)
 Frame = +2

Query: 143  MACY----HQIPTFWRNLHCRARSFSLTYRAVVNSSCSFRKPFATLESSYSSSFNKGYCR 310
            MACY    H I   W NL+C   SFS T +   NS C  R+    L  S S    KG C 
Sbjct: 1    MACYRSSHHHIRFLWGNLNCWRSSFSRTQKIGNNSCCLQRR---NLIHSPSILSRKGCCT 57

Query: 311  VSNRLKENFPGDAHGIS--STTLGTVETAQTLGQGTLFDSTQCEDTLVSIDSSNGRVMLI 484
            +SN L  +    AH IS  +TT+ + ++ + L QG   DS   ++  + I SSNGRVMLI
Sbjct: 58   LSNSLDSSIHEVAHTISYGNTTISS-KSERKLCQGAFVDSVDHKERKMDISSSNGRVMLI 116

Query: 485  DGTSIIYRAYYKLLAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSHVAVVFDHD 664
            DGTSIIYRAYYKLLAKLHHG+LSHADGNGDWVLTIF+ALSLI+DVL+FIPSHVAVVFDH+
Sbjct: 117  DGTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFAALSLIVDVLDFIPSHVAVVFDHN 176

Query: 665  GIPFGHVPLSSNQSFVAKGLNFRHTLYPLYKSNRPPTPDTVVQGLQYLKASIKAMSIKVI 844
            GIPFGH  +SS +S +AKGLNFRHTLYP YKSNRPPTPDT+VQGLQYLKASIKAMSIKVI
Sbjct: 177  GIPFGHTSISSKESIMAKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVI 236

Query: 845  EVPGVEADDVIGTLALRSINDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGIE 1024
            EVPGVEADDVIGTL++RS++ G+KVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFG+E
Sbjct: 237  EVPGVEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGME 296

Query: 1025 DFAKKYGALKPSQFVDIISLVGDRADNIPGVEGIGNVHAVQLITKFGTLENLLKNVDQVE 1204
            DFAK+YG L+PSQFVD+ISLVGD++DNIPGVEGIGNVHAVQLITKFGTLENLL+ VDQV+
Sbjct: 297  DFAKRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQVQ 356

Query: 1205 EDRIRKALVSNVEEAILSKNLAFLRSDLPFYMVPFATQDLTFKKPEDGGEKFTSLLTAIS 1384
            E+RIRKAL+S  ++A+LSKNLA LR DLPFYMVPF T+DL F KPED GEKFTSLL AIS
Sbjct: 357  EERIRKALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKPEDNGEKFTSLLNAIS 416

Query: 1385 AYAEGFSADKIIRRAFYLWKKLEKQ 1459
            AYAEGFSAD IIRRAFYLWKKLEKQ
Sbjct: 417  AYAEGFSADPIIRRAFYLWKKLEKQ 441


>ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 444

 Score =  551 bits (1420), Expect = e-154
 Identities = 281/439 (64%), Positives = 332/439 (75%), Gaps = 8/439 (1%)
 Frame = +2

Query: 167  TFWRNL----HCRARSFSLTYRAVVNSSCSFRKPFATLESSYSSSFNKGYCRVSNRLKEN 334
            +FWR L    H  A  F+          C+ + P   L S   +  +KGYCR ++     
Sbjct: 16   SFWRKLPFPRHVTASGFT----------CNLQTPSLLLSSRSRALLSKGYCRATSESPGA 65

Query: 335  FPGDAHGISSTTLGTVETAQTLGQGTL----FDSTQCEDTLVSIDSSNGRVMLIDGTSII 502
             P      +++     E    +G GT       S    + + + +  NGRVM+IDGTSII
Sbjct: 66   VPATPRSAAASGTLIPEAGIGIGTGTAQALQSGSAGNAELVTNAEPLNGRVMIIDGTSII 125

Query: 503  YRAYYKLLAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSHVAVVFDHDGIPFGH 682
            +RAYYKLLAKLHHGHL+HADGNGDWVL +F+ALSLIIDVL+FIPSHV VVFDHDGIP GH
Sbjct: 126  HRAYYKLLAKLHHGHLTHADGNGDWVLMMFTALSLIIDVLKFIPSHVVVVFDHDGIPIGH 185

Query: 683  VPLSSNQSFVAKGLNFRHTLYPLYKSNRPPTPDTVVQGLQYLKASIKAMSIKVIEVPGVE 862
               SS +SF AKG NFRH LYP YKSNRPPTPDT+VQGLQY KASIKAMSIK+IEVPGVE
Sbjct: 186  TYNSSKESFTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEVPGVE 245

Query: 863  ADDVIGTLALRSINDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGIEDFAKKY 1042
            ADDVIGTLALRS++ G+KVRVVSPDKDFFQILSPSLRLLRIAPRG EM SFG+EDF ++Y
Sbjct: 246  ADDVIGTLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDEMVSFGVEDFEERY 305

Query: 1043 GALKPSQFVDIISLVGDRADNIPGVEGIGNVHAVQLITKFGTLENLLKNVDQVEEDRIRK 1222
            G LKPSQF D+I+L GDR+DNIPGV GIG+VHAVQL+++FGTLE LL +VDQ++ED I+K
Sbjct: 306  GGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLLSRFGTLERLLDSVDQIKEDHIKK 365

Query: 1223 ALVSNVEEAILSKNLAFLRSDLPFYMVPFATQDLTFKKPEDGGEKFTSLLTAISAYAEGF 1402
            AL+ N E+A+LSK LA LRSDLP YMVP A +DL+F KPED G KF SLLTAISAYAEGF
Sbjct: 366  ALIENAEQAVLSKELALLRSDLPLYMVPLAIKDLSFNKPEDNGSKFNSLLTAISAYAEGF 425

Query: 1403 SADKIIRRAFYLWKKLEKQ 1459
            SAD IIRR  +LW+KL+ +
Sbjct: 426  SADPIIRRTVHLWQKLDSR 444


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  550 bits (1418), Expect = e-154
 Identities = 285/393 (72%), Positives = 327/393 (83%), Gaps = 6/393 (1%)
 Frame = +2

Query: 296  KGYCRVSNRLKENFPGDA----HGISSTTL--GTVETAQTLGQGTLFDSTQCEDTLVSID 457
            KGYC  S  +      D     HG S++T     V+   +L     F     EDT +  +
Sbjct: 73   KGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK----EDTGID-N 127

Query: 458  SSNGRVMLIDGTSIIYRAYYKLLAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPS 637
             ++ RVMLIDGTSII+RAYYKLLAKLHHGHLSHADGNGDWVLTIF+ALSLI+DVLE +PS
Sbjct: 128  PADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMPS 187

Query: 638  HVAVVFDHDGIPFGHVPLSSNQSFVAKGLNFRHTLYPLYKSNRPPTPDTVVQGLQYLKAS 817
            HVAVVFDHDG P+GH  +SSN++F++KG  FRHT+YP YKSNR PTPDTVVQGLQYLKAS
Sbjct: 188  HVAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKAS 247

Query: 818  IKAMSIKVIEVPGVEADDVIGTLALRSINDGFKVRVVSPDKDFFQILSPSLRLLRIAPRG 997
            IK+MSIKVIEVPGVEADDVIGTLALRS+  G KVRVVSPDKDFFQILSPSLRLLRIA RG
Sbjct: 248  IKSMSIKVIEVPGVEADDVIGTLALRSVAVGCKVRVVSPDKDFFQILSPSLRLLRIASRG 307

Query: 998  FEMTSFGIEDFAKKYGALKPSQFVDIISLVGDRADNIPGVEGIGNVHAVQLITKFGTLEN 1177
             EM SFG+EDFA K+G L+PSQFVD++SLVGD++DNIPGV+GIGNV+AVQLIT+FGTLEN
Sbjct: 308  IEMVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLEN 367

Query: 1178 LLKNVDQVEEDRIRKALVSNVEEAILSKNLAFLRSDLPFYMVPFATQDLTFKKPEDGGEK 1357
            LL++VDQVE++RI+K LV+N E+AILSK+LA LRSDLPFYMVPF T+DL FKKPED GEK
Sbjct: 368  LLQHVDQVEDERIKKMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEK 427

Query: 1358 FTSLLTAISAYAEGFSADKIIRRAFYLWKKLEK 1456
            FTSLLTAI AYAE FSAD IIRR  YLWKKL+K
Sbjct: 428  FTSLLTAIGAYAERFSADPIIRRVLYLWKKLDK 460


>ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 436

 Score =  547 bits (1409), Expect = e-153
 Identities = 282/442 (63%), Positives = 337/442 (76%), Gaps = 3/442 (0%)
 Frame = +2

Query: 143  MACYHQIPTFWRNLHCRARSFSLTYRAVVNS-SCSFRKPFATLESSYSSSFNKGYCRVSN 319
            MAC ++    + + H   R           S S + R P+  L  S  +  +KGYC  ++
Sbjct: 1    MACCYKYHNLFLHSHFLLRKLPFPSHVYATSFSRNLRTPW--LLRSSRAPLSKGYCSATS 58

Query: 320  RLKENFPGDAHGISSTTL--GTVETAQTLGQGTLFDSTQCEDTLVSIDSSNGRVMLIDGT 493
                  P      ++T +    + TA+ +  G+  ++    + + + D  NGRVM+IDGT
Sbjct: 59   ESPGAVPATPPTAAATLVPGAGIGTARAMQLGSAVNA----ERVTNSDPLNGRVMIIDGT 114

Query: 494  SIIYRAYYKLLAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSHVAVVFDHDGIP 673
            SII+RAYYKLLAKLHHGHL+HADGNGDWVL +F+ALSLIIDVLEFIPSHV VVFDHDGIP
Sbjct: 115  SIIHRAYYKLLAKLHHGHLTHADGNGDWVLMMFTALSLIIDVLEFIPSHVVVVFDHDGIP 174

Query: 674  FGHVPLSSNQSFVAKGLNFRHTLYPLYKSNRPPTPDTVVQGLQYLKASIKAMSIKVIEVP 853
             GH   SS +SF AKG NFRH LYP YKSNRPPTPDT+VQGLQY KASIKAMSIK+IEVP
Sbjct: 175  IGHTYNSSKESFTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEVP 234

Query: 854  GVEADDVIGTLALRSINDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGIEDFA 1033
            GVEADDVIGTLALRS++ G+KVRVVSPDKDFFQILSPSLRLLRIAPRG +M SFG+EDF 
Sbjct: 235  GVEADDVIGTLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDFE 294

Query: 1034 KKYGALKPSQFVDIISLVGDRADNIPGVEGIGNVHAVQLITKFGTLENLLKNVDQVEEDR 1213
            ++YG LKPSQF D+I+L GDR+DNIPGV GIG+VHAVQLI++FGTLE LL +VDQ++EDR
Sbjct: 295  ERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLISRFGTLERLLDSVDQIKEDR 354

Query: 1214 IRKALVSNVEEAILSKNLAFLRSDLPFYMVPFATQDLTFKKPEDGGEKFTSLLTAISAYA 1393
            I+KAL+ N E+A+LSK LA LRSDLP YMVP A +DL+F KPED G KF SLLTAISAYA
Sbjct: 355  IKKALIENAEQAVLSKELALLRSDLPLYMVPLAIRDLSFNKPEDNGSKFNSLLTAISAYA 414

Query: 1394 EGFSADKIIRRAFYLWKKLEKQ 1459
            EGFSAD IIRR  +LW KL+ +
Sbjct: 415  EGFSADPIIRRTVHLWGKLDSR 436


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
            gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
            thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
            exonuclease-like protein [Arabidopsis thaliana]
            gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 425

 Score =  538 bits (1385), Expect = e-150
 Identities = 283/434 (65%), Positives = 338/434 (77%)
 Frame = +2

Query: 152  YHQIPTFWRNLHCRARSFSLTYRAVVNSSCSFRKPFATLESSYSSSFNKGYCRVSNRLKE 331
            YH     WRNL C  RS       + N +CS   P     + Y       YC  S+    
Sbjct: 6    YHHSRFLWRNL-CFPRSVG----NLCNRNCSLISPSLARSAKY-------YC--SSVAVS 51

Query: 332  NFPGDAHGISSTTLGTVETAQTLGQGTLFDSTQCEDTLVSIDSSNGRVMLIDGTSIIYRA 511
             F  +A   S +TL ++    T  Q   +     E    +  SSNGRVMLIDGTSIIYRA
Sbjct: 52   EFSNEA--ASGSTLTSISEDVT-PQSIKYPFKSEERVASTAASSNGRVMLIDGTSIIYRA 108

Query: 512  YYKLLAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSHVAVVFDHDGIPFGHVPL 691
            YYKLLA+L+HGHL+HADGN DWVLTIFS+LSL+IDVL+F+PSHVAVVFDHDG+P+G    
Sbjct: 109  YYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSHVAVVFDHDGVPYGTTSN 168

Query: 692  SSNQSFVAKGLNFRHTLYPLYKSNRPPTPDTVVQGLQYLKASIKAMSIKVIEVPGVEADD 871
            SS     AKG+NFRHTLYP YKSNRPPTPDT+VQGLQYLKASIKAMSIKVIEVPGVEADD
Sbjct: 169  SSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADD 228

Query: 872  VIGTLALRSINDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGIEDFAKKYGAL 1051
            VIGTLA+RSI+ GFKVRVVSPDKDFFQILSPSLRLLR+ PRG EM SFG+EDFAKK+G L
Sbjct: 229  VIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEMASFGMEDFAKKFGNL 288

Query: 1052 KPSQFVDIISLVGDRADNIPGVEGIGNVHAVQLITKFGTLENLLKNVDQVEEDRIRKALV 1231
            +P+QFVDII+L GD++DNIPGV+GIGNVHAV+LI++FGTLENLL++VD+++E +I+++L+
Sbjct: 289  EPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLENLLQSVDEIKEGKIKESLI 348

Query: 1232 SNVEEAILSKNLAFLRSDLPFYMVPFATQDLTFKKPEDGGEKFTSLLTAISAYAEGFSAD 1411
            ++ ++AILSK LA LRSDLP Y+VPF T+DLTFKKPED GEK +SLL AI+ YAEGFSAD
Sbjct: 349  ASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEKLSSLLIAIADYAEGFSAD 408

Query: 1412 KIIRRAFYLWKKLE 1453
             +IRRAF LW+KLE
Sbjct: 409  PVIRRAFRLWEKLE 422


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