BLASTX nr result

ID: Panax21_contig00017673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017673
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associate...   156   2e-36
emb|CAN69643.1| hypothetical protein VITISV_028571 [Vitis vinifera]   156   2e-36
ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associate...   149   3e-34
ref|NP_191625.1| spindle and kinetochore-associated protein 1-li...   147   1e-33
ref|XP_002511664.1| conserved hypothetical protein [Ricinus comm...   143   1e-32

>ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Vitis vinifera] gi|296089173|emb|CBI38876.3| unnamed
           protein product [Vitis vinifera]
          Length = 269

 Score =  156 bits (394), Expect = 2e-36
 Identities = 85/125 (68%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +2

Query: 92  SSITDLSAVDAVLKAMMLQVQQIKDRLREETEAIPKAKKLIDASLRQQKKLHNMSAYVPL 271
           SSITDL+AVDA LKAM LQVQ IKDRLR+E EAIPKAKKLIDASLRQQKKL +M +YVP 
Sbjct: 37  SSITDLTAVDASLKAMELQVQAIKDRLRDEIEAIPKAKKLIDASLRQQKKLQSMYSYVPS 96

Query: 272 QLPERVSTINQDNAKCLLPDASKQDLTFSSMK-LEEPATLPKEKKGRSTPPLWYITTYEL 448
             P+RV+  N +++K L+ + SKQ   F S K  EEPA  PKEKKGR+ PPLW+IT  EL
Sbjct: 97  NFPDRVAPSNLESSKSLMSETSKQCTNFGSEKHEEEPAAPPKEKKGRAPPPLWFITIDEL 156

Query: 449 DSLSS 463
           DSLSS
Sbjct: 157 DSLSS 161


>emb|CAN69643.1| hypothetical protein VITISV_028571 [Vitis vinifera]
          Length = 279

 Score =  156 bits (394), Expect = 2e-36
 Identities = 85/125 (68%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +2

Query: 92  SSITDLSAVDAVLKAMMLQVQQIKDRLREETEAIPKAKKLIDASLRQQKKLHNMSAYVPL 271
           SSITDL+AVDA LKAM LQVQ IKDRLR+E EAIPKAKKLIDASLRQQKKL +M +YVP 
Sbjct: 47  SSITDLTAVDASLKAMELQVQAIKDRLRDEIEAIPKAKKLIDASLRQQKKLQSMYSYVPS 106

Query: 272 QLPERVSTINQDNAKCLLPDASKQDLTFSSMK-LEEPATLPKEKKGRSTPPLWYITTYEL 448
             P+RV+  N +++K L+ + SKQ   F S K  EEPA  PKEKKGR+ PPLW+IT  EL
Sbjct: 107 NFPDRVAPSNLESSKSLMSETSKQCTNFGSEKHEEEPAAPPKEKKGRAPPPLWFITIDEL 166

Query: 449 DSLSS 463
           DSLSS
Sbjct: 167 DSLSS 171


>ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Glycine max]
          Length = 270

 Score =  149 bits (375), Expect = 3e-34
 Identities = 78/126 (61%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
 Frame = +2

Query: 92  SSITDLSAVDAVLKAMMLQVQQIKDRLREETEAIPKAKKLIDASLRQQKKLHNMSAYVPL 271
           S + DLSAVDA + AM LQV+ IKDRLREE  AIPK KKLIDASLRQQKKL NMS +VP 
Sbjct: 37  SGVEDLSAVDAAVSAMELQVKAIKDRLREEALAIPKTKKLIDASLRQQKKLQNMSLHVPY 96

Query: 272 QLPERVSTINQDNAKCLLPDASKQDL-TFSSMKL-EEPATLPKEKKGRSTPPLWYITTYE 445
           Q+ ++V+  + + ++CL P+ S QD  +F ++KL EEPA +PKEKKGR  PP WY+T  E
Sbjct: 97  QMADKVTVSHLETSRCLFPEFSGQDSGSFEALKLEEEPAAVPKEKKGRGPPPTWYVTRSE 156

Query: 446 LDSLSS 463
           LDSLSS
Sbjct: 157 LDSLSS 162


>ref|NP_191625.1| spindle and kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
           gi|75181374|sp|Q9LZZ7.1|SKA1_ARATH RecName: Full=Spindle
           and kinetochore-associated protein 1 homolog
           gi|7329676|emb|CAB82670.1| putative protein [Arabidopsis
           thaliana] gi|26450283|dbj|BAC42258.1| unknown protein
           [Arabidopsis thaliana] gi|28827580|gb|AAO50634.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646573|gb|AEE80094.1| spindle and
           kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
          Length = 272

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
 Frame = +2

Query: 92  SSITDLSAVDAVLKAMMLQVQQIKDRLREETEAIPKAKKLIDASLRQQKKLHNMSAYVPL 271
           S+I DLSA+D  L +M LQVQ IKDRLREETEAIPKAKKLI+ASL+QQ KL  MS Y P 
Sbjct: 37  STIPDLSAIDTALSSMELQVQSIKDRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPS 96

Query: 272 QLPERVSTINQDNAKCLLPDASK---QDLTFSSMKL-EEPATLPKEKKGRSTPPLWYITT 439
             P++ + +N D  +CLL + +K   Q  T SS+K  EE A LPKEKKGR +PPLWYIT 
Sbjct: 97  HFPDKATMLNSDLNRCLLQENAKQYEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITV 156

Query: 440 YELDSLSS 463
            EL+SLSS
Sbjct: 157 EELNSLSS 164


>ref|XP_002511664.1| conserved hypothetical protein [Ricinus communis]
           gi|223548844|gb|EEF50333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  143 bits (361), Expect = 1e-32
 Identities = 80/123 (65%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +2

Query: 92  SSITDLSAVDAVLKAMMLQVQQIKDRLREETEAIPKAKKLIDASLRQQKKLHNMSAYVPL 271
           SSITDLSAVD  LK M LQ+Q IKDRLREE EAIPKAKKLI+ SLRQQKKL +MS++V  
Sbjct: 37  SSITDLSAVDTSLKTMELQIQAIKDRLREEFEAIPKAKKLIEMSLRQQKKLQSMSSHV-- 94

Query: 272 QLPERVSTINQDNAKCLLPDASKQDLTFSSMKLE-EPATLPKEKKGRSTPPLWYITTYEL 448
            LP R+ ++N D  K + P+A  Q   F S+K E EPA LPKEKKGR+ PPLWYIT  EL
Sbjct: 95  -LPHRMISLNLDANKSVPPEAPNQQNEFGSLKTENEPAPLPKEKKGRAPPPLWYITADEL 153

Query: 449 DSL 457
           +SL
Sbjct: 154 NSL 156


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