BLASTX nr result

ID: Panax21_contig00017650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017650
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [V...   405   e-111
ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [C...   369   e-100
ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [C...   367   3e-99
ref|XP_002533076.1| conserved hypothetical protein [Ricinus comm...   366   4e-99
gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Ni...   355   6e-96

>ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [Vitis vinifera]
          Length = 300

 Score =  405 bits (1040), Expect = e-111
 Identities = 195/285 (68%), Positives = 226/285 (79%), Gaps = 3/285 (1%)
 Frame = +1

Query: 28  MSTNQRPRLN-PNSPSDDTESGILDERILLLVLESIKWNVHVLCLTASLSRKLRAFAKRL 204
           MS NQR RLN P   SD  ESGIL+ERIL+L+ ESIKW++HVLC  ++++RKLRA A RL
Sbjct: 1   MSANQRLRLNSPGPASDSGESGILNERILVLIFESIKWDIHVLCAASAVNRKLRAVATRL 60

Query: 205 LWKELCVYRAPRMIAALTEGGSSSRLGGGWPALAKLLFFCCGCESTRHFRVSQSTPGHFM 384
           LW+ELCVYRAPRM+ AL  G  + RLGGGW ALAKL+FFCCGCESTRHFRVS+ +PGHF+
Sbjct: 61  LWRELCVYRAPRMVTALATGAPNGRLGGGWHALAKLMFFCCGCESTRHFRVSRPSPGHFV 120

Query: 385 KSSRFSKTSGRSFLTRRCGGDMLYVSDPCEHPTGDREDDLGVYRGVFRGFTKSKTRACLI 564
           K SRFSKTSGRSFLT++C GD+LYVSDPCEHP G+REDDLG+YRGVFRGF +SKTRACLI
Sbjct: 121 KESRFSKTSGRSFLTKKCSGDLLYVSDPCEHPMGEREDDLGIYRGVFRGFMRSKTRACLI 180

Query: 565 RRGVGLEEGNRCPYCGARVWSMTSARLVPKSAARRLGSHDGAIEYFVCVNGHLYGTCWLV 744
           RR V LEE   CPYCGARVWSMT+ARLVPKSAARRLG+HDG +EYFVC+NGHL+GTCWLV
Sbjct: 181 RRQVKLEERVCCPYCGARVWSMTAARLVPKSAARRLGTHDGGLEYFVCLNGHLHGTCWLV 240

Query: 745 PLSSDEH--QXXXXXXXXXXXXXXXXXRVGLDNRTANNGSCSFVA 873
           PLSSDE                     R   D+RT  +GS S ++
Sbjct: 241 PLSSDEDNGDDEDADDGCSDDADDGSGRSECDDRTVTDGSVSSIS 285


>ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus]
          Length = 313

 Score =  369 bits (946), Expect = e-100
 Identities = 170/245 (69%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
 Frame = +1

Query: 31  STNQRPRLNPNSP-SDDTESGILDERILLLVLESIKWNVHVLCLTASLSRKLRAFAKRLL 207
           +TN+R + +P+   S+  +SGI +ERILLLV  +IKW++  LC+TASL+RKLRA A+RLL
Sbjct: 4   NTNRRFKPSPSPQGSESDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAERLL 63

Query: 208 WKELCVYRAPRMIAALTEGGSSSRLGGGWPALAKLLFFCCGCESTRHFRVSQSTPGHFMK 387
           W+ELC  RAPRM+AALT G  ++R+GGGW ALAKL+FFCCGC+S+RHF+V+Q  PGHF+ 
Sbjct: 64  WRELCFNRAPRMLAALTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGHFVH 123

Query: 388 SSRFSKTSGRSFLTRRCGGDMLYVSDPCEHPTGDREDDLGVYRGVFRGFTKSKTRACLIR 567
            SRFSKTSG+SFLT++C GD+LYVSDPCEH  G  EDDLG+YRG+FRGF +SKTRA LI+
Sbjct: 124 ESRFSKTSGQSFLTKKCRGDLLYVSDPCEHSNGRDEDDLGIYRGIFRGFMRSKTRAFLIK 183

Query: 568 RGVGLEEGNRCPYCGARVWSMTSARLVPKSAARRLGSHDGAIEYFVCVNGHLYGTCWLVP 747
           R V LEE  RCPYCGARVWSMT+ARLVPKS ARRLG+HDG +EYFVCVNGHL+G+CWLVP
Sbjct: 184 REVRLEETTRCPYCGARVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243

Query: 748 LSSDE 762
           LSS+E
Sbjct: 244 LSSEE 248


>ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus]
          Length = 313

 Score =  367 bits (941), Expect = 3e-99
 Identities = 169/245 (68%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
 Frame = +1

Query: 31  STNQRPRLNPNSP-SDDTESGILDERILLLVLESIKWNVHVLCLTASLSRKLRAFAKRLL 207
           +TN+R + +P+   S+  +SGI +ERILLLV  +IKW++  LC+TASL+RKLRA A+RLL
Sbjct: 4   NTNRRFKPSPSPQGSESDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAERLL 63

Query: 208 WKELCVYRAPRMIAALTEGGSSSRLGGGWPALAKLLFFCCGCESTRHFRVSQSTPGHFMK 387
           W+ELC  RAPRM+AALT G  ++R+GGGW ALAKL+FFCCGC+S+RHF+V+Q  PGHF+ 
Sbjct: 64  WRELCFNRAPRMLAALTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGHFVH 123

Query: 388 SSRFSKTSGRSFLTRRCGGDMLYVSDPCEHPTGDREDDLGVYRGVFRGFTKSKTRACLIR 567
            SRFSKTSG+SFLT++C GD+LYVSDPCEH  G  ED+LG+YRG+FRGF +SKTRA LI+
Sbjct: 124 ESRFSKTSGQSFLTKKCRGDLLYVSDPCEHSNGRDEDNLGIYRGIFRGFMRSKTRAFLIK 183

Query: 568 RGVGLEEGNRCPYCGARVWSMTSARLVPKSAARRLGSHDGAIEYFVCVNGHLYGTCWLVP 747
           R V LEE  RCPYCGARVWSMT+ARLVPKS ARRLG+HDG +EYFVCVNGHL+G+CWLVP
Sbjct: 184 REVRLEETTRCPYCGARVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243

Query: 748 LSSDE 762
           LSS+E
Sbjct: 244 LSSEE 248


>ref|XP_002533076.1| conserved hypothetical protein [Ricinus communis]
           gi|223527140|gb|EEF29315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  366 bits (939), Expect = 4e-99
 Identities = 166/235 (70%), Positives = 200/235 (85%)
 Frame = +1

Query: 58  PNSPSDDTESGILDERILLLVLESIKWNVHVLCLTASLSRKLRAFAKRLLWKELCVYRAP 237
           PN   D  ESGIL+ERIL+LV ESIKW++H LC TAS++RKLRA AKR LW+ELCVYRAP
Sbjct: 12  PNQGCDSGESGILNERILVLVFESIKWDLHALCATASVNRKLRAIAKRFLWRELCVYRAP 71

Query: 238 RMIAALTEGGSSSRLGGGWPALAKLLFFCCGCESTRHFRVSQSTPGHFMKSSRFSKTSGR 417
           RM+A+LT G  ++  G  W A+AKL+F+CCGCEST++F+VSQ +PGHF+++SRFSKTSG+
Sbjct: 72  RMLASLTNGAPNAPFGDSWHAIAKLMFYCCGCESTQNFKVSQPSPGHFIETSRFSKTSGQ 131

Query: 418 SFLTRRCGGDMLYVSDPCEHPTGDREDDLGVYRGVFRGFTKSKTRACLIRRGVGLEEGNR 597
           SFL ++C GD+LYVSDPCEH   + EDDLG+YRGVF+GF KS+TRACLIRR V LE+  R
Sbjct: 132 SFLNKKCRGDLLYVSDPCEHSASNNEDDLGIYRGVFKGFMKSRTRACLIRRQVELEKRTR 191

Query: 598 CPYCGARVWSMTSARLVPKSAARRLGSHDGAIEYFVCVNGHLYGTCWLVPLSSDE 762
           CPYCG RVWSMTSARLVPK+AARRLGS +  +EYFVC+NGHLYG CWLVPLSSDE
Sbjct: 192 CPYCGFRVWSMTSARLVPKTAARRLGSREDGLEYFVCLNGHLYGCCWLVPLSSDE 246


>gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Nicotiana tabacum]
          Length = 291

 Score =  355 bits (912), Expect = 6e-96
 Identities = 165/248 (66%), Positives = 201/248 (81%), Gaps = 3/248 (1%)
 Frame = +1

Query: 28  MSTNQRPRLNPNSPSDDTES---GILDERILLLVLESIKWNVHVLCLTASLSRKLRAFAK 198
           MS N   +   NS  D +ES   GI DERIL+ V  SI W++  LC  + ++RKLRA AK
Sbjct: 1   MSDNHSKKRLFNSAGDSSESEGSGIYDERILIPVFASINWDIRTLCQMSCVNRKLRAVAK 60

Query: 199 RLLWKELCVYRAPRMIAALTEGGSSSRLGGGWPALAKLLFFCCGCESTRHFRVSQSTPGH 378
           R+LW+E+CVYRAP+MI ALT+G  S R+GGGW A+AKL+FFC GC S+RHF+V +  PGH
Sbjct: 61  RILWREMCVYRAPQMITALTDGSPSGRIGGGWQAMAKLMFFCNGCRSSRHFQVGEPAPGH 120

Query: 379 FMKSSRFSKTSGRSFLTRRCGGDMLYVSDPCEHPTGDREDDLGVYRGVFRGFTKSKTRAC 558
           F+K+SRFSKTSGRSFL ++C  D+LYVSDPCEHPTGD++DDLG++RGVF GF +S+TRAC
Sbjct: 121 FVKTSRFSKTSGRSFLVKKCRNDLLYVSDPCEHPTGDKDDDLGIFRGVFWGFMRSRTRAC 180

Query: 559 LIRRGVGLEEGNRCPYCGARVWSMTSARLVPKSAARRLGSHDGAIEYFVCVNGHLYGTCW 738
           LIRR V LEE  +CP+CGARVWSMT+ARLVPKSAARRLGS +  +EYFVCVNGHL+G CW
Sbjct: 181 LIRRQVELEEKIKCPFCGARVWSMTAARLVPKSAARRLGSMESGLEYFVCVNGHLHGACW 240

Query: 739 LVPLSSDE 762
           LVPLSSDE
Sbjct: 241 LVPLSSDE 248


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