BLASTX nr result

ID: Panax21_contig00017640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017640
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA...   243   2e-62
gb|AFK39059.1| unknown [Lotus japonicus]                              229   3e-58
gb|AFK35077.1| unknown [Lotus japonicus]                              229   6e-58
ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA...   227   2e-57
emb|CBI21524.3| unnamed protein product [Vitis vinifera]              226   4e-57

>ref|XP_004141965.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Cucumis sativus] gi|449515823|ref|XP_004164947.1|
           PREDICTED: iron-sulfur assembly protein IscA,
           chloroplastic-like [Cucumis sativus]
          Length = 174

 Score =  243 bits (621), Expect = 2e-62
 Identities = 117/140 (83%), Positives = 128/140 (91%)
 Frame = -2

Query: 616 FRSLAFNRRRNLSIRSVSTKAPSTAGGIAPAISLTDDALKHLNKMRSERKEDLCLRIGVK 437
           F S  F+RR++LSIRSVS  A   + GIAPAISLTD ALKHLNKMRSER EDLCLRIGV+
Sbjct: 35  FPSTKFSRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVR 94

Query: 436 QGGCSGMSYTMEFESKENARPDDSVMEYNGFVIVCDPKSLLFIYGMQLDFSDALIGGGFS 257
           QGGCSGMSYTMEFES+ NARPDDS++EYNGFVIVCDPKSLLF++GMQLD+SDALIGGGFS
Sbjct: 95  QGGCSGMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFS 154

Query: 256 FKNPNATQTCGCGKSFNAEM 197
           FKNPNATQTCGCGKSFNAEM
Sbjct: 155 FKNPNATQTCGCGKSFNAEM 174


>gb|AFK39059.1| unknown [Lotus japonicus]
          Length = 169

 Score =  229 bits (585), Expect = 3e-58
 Identities = 107/137 (78%), Positives = 123/137 (89%)
 Frame = -2

Query: 607 LAFNRRRNLSIRSVSTKAPSTAGGIAPAISLTDDALKHLNKMRSERKEDLCLRIGVKQGG 428
           L FNR ++LSIRSVS  A  ++G +APA+SLTD ALKHLN+MRSE+ +DLCLRIGVKQGG
Sbjct: 33  LRFNRPKSLSIRSVSVPAAPSSGSVAPAVSLTDQALKHLNRMRSEKNQDLCLRIGVKQGG 92

Query: 427 CSGMSYTMEFESKENARPDDSVMEYNGFVIVCDPKSLLFIYGMQLDFSDALIGGGFSFKN 248
           CSGMSY+M+FE + N RPDDS++EY GFVIVCDPKSLLFI+GMQLD+SDALIGGGFSFKN
Sbjct: 93  CSGMSYSMDFEDRANTRPDDSIIEYEGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKN 152

Query: 247 PNATQTCGCGKSFNAEM 197
           PNATQTCGCGKSF AEM
Sbjct: 153 PNATQTCGCGKSFAAEM 169


>gb|AFK35077.1| unknown [Lotus japonicus]
          Length = 169

 Score =  229 bits (583), Expect = 6e-58
 Identities = 107/137 (78%), Positives = 123/137 (89%)
 Frame = -2

Query: 607 LAFNRRRNLSIRSVSTKAPSTAGGIAPAISLTDDALKHLNKMRSERKEDLCLRIGVKQGG 428
           L FNR ++LSIRSVS  A  ++G +APA+SLTD ALKHLN+MRSE+ +DLCLRIGVKQGG
Sbjct: 33  LRFNRPKSLSIRSVSVPAAPSSGSMAPAVSLTDQALKHLNRMRSEKNQDLCLRIGVKQGG 92

Query: 427 CSGMSYTMEFESKENARPDDSVMEYNGFVIVCDPKSLLFIYGMQLDFSDALIGGGFSFKN 248
           CSGMSY+M+FE + N RPDDS++EY GFVIVCDPKSLLFI+GMQLD+SDALIGGGFSFKN
Sbjct: 93  CSGMSYSMDFEDRANTRPDDSIIEYEGFVIVCDPKSLLFIFGMQLDYSDALIGGGFSFKN 152

Query: 247 PNATQTCGCGKSFNAEM 197
           PNATQTCGCGKSF AEM
Sbjct: 153 PNATQTCGCGKSFAAEM 169


>ref|XP_002279428.1| PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like
           [Vitis vinifera]
          Length = 173

 Score =  227 bits (578), Expect = 2e-57
 Identities = 110/138 (79%), Positives = 121/138 (87%)
 Frame = -2

Query: 610 SLAFNRRRNLSIRSVSTKAPSTAGGIAPAISLTDDALKHLNKMRSERKEDLCLRIGVKQG 431
           +L+F +R   SIRS S  A  T GG+ PAISLTD+ALKHLNKMRS+R EDLCLRIGVKQG
Sbjct: 38  NLSFPKR--FSIRSSSVSAAPTTGGLMPAISLTDNALKHLNKMRSDRTEDLCLRIGVKQG 95

Query: 430 GCSGMSYTMEFESKENARPDDSVMEYNGFVIVCDPKSLLFIYGMQLDFSDALIGGGFSFK 251
           GCSGMSYTMEFE +   RPDDS++EYNGFVIVCDPKSLLF++GMQLDFSDALIGGGFSFK
Sbjct: 96  GCSGMSYTMEFEDRAKTRPDDSIIEYNGFVIVCDPKSLLFVFGMQLDFSDALIGGGFSFK 155

Query: 250 NPNATQTCGCGKSFNAEM 197
           NPNATQTCGCGKSF AEM
Sbjct: 156 NPNATQTCGCGKSFAAEM 173


>emb|CBI21524.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  226 bits (576), Expect = 4e-57
 Identities = 111/138 (80%), Positives = 123/138 (89%)
 Frame = -2

Query: 610 SLAFNRRRNLSIRSVSTKAPSTAGGIAPAISLTDDALKHLNKMRSERKEDLCLRIGVKQG 431
           +L+F +R   SIRS S  AP+T GG+ PAISLTD+ALKHLNKMRS+R EDLCLRIGVKQG
Sbjct: 16  NLSFPKR--FSIRSSSVSAPTT-GGLMPAISLTDNALKHLNKMRSDRTEDLCLRIGVKQG 72

Query: 430 GCSGMSYTMEFESKENARPDDSVMEYNGFVIVCDPKSLLFIYGMQLDFSDALIGGGFSFK 251
           GCSGMSYTMEFE +   RPDDS++EYNGFVIVCDPKSLLF++GMQLDFSDALIGGGFSFK
Sbjct: 73  GCSGMSYTMEFEDRAKTRPDDSIIEYNGFVIVCDPKSLLFVFGMQLDFSDALIGGGFSFK 132

Query: 250 NPNATQTCGCGKSFNAEM 197
           NPNATQTCGCGKSF AEM
Sbjct: 133 NPNATQTCGCGKSFAAEM 150


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