BLASTX nr result

ID: Panax21_contig00017630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017630
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310055.1| predicted protein [Populus trichocarpa] gi|2...   269   6e-70
ref|XP_003535768.1| PREDICTED: uncharacterized protein LOC100808...   258   1e-66
ref|NP_974751.1| riboflavin biosynthesis protein-like protein [A...   248   1e-63
ref|NP_568192.2| riboflavin biosynthesis protein-like protein [A...   248   1e-63
gb|AFK43646.1| unknown [Lotus japonicus]                              244   1e-62

>ref|XP_002310055.1| predicted protein [Populus trichocarpa] gi|222852958|gb|EEE90505.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  269 bits (687), Expect = 6e-70
 Identities = 148/243 (60%), Positives = 178/243 (73%), Gaps = 13/243 (5%)
 Frame = +1

Query: 97  TGSRISHRLRECNHQNXXXXXXXXXXXSCTQMIKLSP-SVALFEKRLDSF---------- 243
           +GSRIS  L  C++               T++ K+S  S +LF  +  SF          
Sbjct: 5   SGSRISQHLANCHYNQKTHLGLGFCN---TKIHKISYLSFSLFMLKPPSFVTIFGGDNYR 61

Query: 244 --SPSSIDFGHPLVGCIQPKSPLSQSSILSDCLSQQEDDGEPPSERLSSVAGGIVALGKF 417
             + S    G   +  +Q KS   ++ ILSDC+SQ+++D E PSE L+SVAGGIVALGKF
Sbjct: 62  HNNYSHCKHGFVSLSSLQSKSSSGETPILSDCVSQRDNDCELPSEGLASVAGGIVALGKF 121

Query: 418 DALHIGHRELAIQAAKVGAPFLLSFVGMAEILGWEPRAPIVAKYDRKRVLSSWAPYCGDV 597
           DALHIGHRELAIQA+KVGAP LLSFVGMAEILGWEPRAPIVAK DR RVLSSWAPYCG++
Sbjct: 122 DALHIGHRELAIQASKVGAPSLLSFVGMAEILGWEPRAPIVAKCDRSRVLSSWAPYCGNL 181

Query: 598 TPTEFEVEFSKVRYLTPRQFVEKLSKKLGVRGVVAGKNYRFGYRASGDASELVRLCEEYG 777
            P E ++EFS VR+LTPRQFVEKLSK+LGV GVVAG+NYRFGY+A+GDASELVRLC+E+G
Sbjct: 182 VPEEVQIEFSCVRHLTPRQFVEKLSKELGVIGVVAGENYRFGYKAAGDASELVRLCKEHG 241

Query: 778 MGA 786
           MGA
Sbjct: 242 MGA 244


>ref|XP_003535768.1| PREDICTED: uncharacterized protein LOC100808911 [Glycine max]
          Length = 372

 Score =  258 bits (659), Expect = 1e-66
 Identities = 138/228 (60%), Positives = 163/228 (71%)
 Frame = +1

Query: 103 SRISHRLRECNHQNXXXXXXXXXXXSCTQMIKLSPSVALFEKRLDSFSPSSIDFGHPLVG 282
           SRISH  R+C+              S  Q   LS      + R    S +++   +   G
Sbjct: 7   SRISHHFRDCDFH---FHFHFTFTYSAFQTFHLSSPPLPLKPRWGGISQTTVPSNYRCFG 63

Query: 283 CIQPKSPLSQSSILSDCLSQQEDDGEPPSERLSSVAGGIVALGKFDALHIGHRELAIQAA 462
              PKSP  +  +L DC SQQE+D E  S+  S+VAGGIVALGKFDALHIGHRELAIQA+
Sbjct: 64  T-PPKSP-GEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHRELAIQAS 121

Query: 463 KVGAPFLLSFVGMAEILGWEPRAPIVAKYDRKRVLSSWAPYCGDVTPTEFEVEFSKVRYL 642
           + G PFLLSFVGMA++LGWEPRAPIVAK DRKR+LSSW PYC ++ P EFEVEFS VR+L
Sbjct: 122 RAGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVEFSSVRHL 181

Query: 643 TPRQFVEKLSKKLGVRGVVAGKNYRFGYRASGDASELVRLCEEYGMGA 786
            PRQFVEKLSK+L VRGVVAG+NYRFGY+A+GDA ELV+LCEEYGM A
Sbjct: 182 NPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEA 229


>ref|NP_974751.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
           gi|332003904|gb|AED91287.1| riboflavin biosynthesis
           protein-like protein [Arabidopsis thaliana]
          Length = 351

 Score =  248 bits (633), Expect = 1e-63
 Identities = 137/236 (58%), Positives = 162/236 (68%), Gaps = 7/236 (2%)
 Frame = +1

Query: 100 GSRISHRLRECNHQNXXXXXXXXXXXSCTQMIK--LSPSVAL-----FEKRLDSFSPSSI 258
           GSR+   L + NH N              Q+    L PS A+     F ++L     SS 
Sbjct: 5   GSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRMISSF 64

Query: 259 DFGHPLVGCIQPKSPLSQSSILSDCLSQQEDDGEPPSERLSSVAGGIVALGKFDALHIGH 438
                  G         +  IL +C SQ+EDD E P E LS V+GGIVALGKFDALHIGH
Sbjct: 65  GSHCRTSG---------EVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGH 115

Query: 439 RELAIQAAKVGAPFLLSFVGMAEILGWEPRAPIVAKYDRKRVLSSWAPYCGDVTPTEFEV 618
           REL IQA+++GAP+LLSFVGMAE+LGWEPRAPIVAK DR+RVL+SWA YCGD  P E+E+
Sbjct: 116 RELTIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEI 175

Query: 619 EFSKVRYLTPRQFVEKLSKKLGVRGVVAGKNYRFGYRASGDASELVRLCEEYGMGA 786
           EF+ VR+LTPRQFVEKLSK+L V GVVAG+NYRFGY+ASGDASELVRLCEE G+ A
Sbjct: 176 EFASVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITA 231


>ref|NP_568192.2| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
           gi|17380946|gb|AAL36285.1| unknown protein [Arabidopsis
           thaliana] gi|20258953|gb|AAM14192.1| unknown protein
           [Arabidopsis thaliana] gi|197258080|gb|ACH56224.1| RibF2
           [Arabidopsis thaliana] gi|332003903|gb|AED91286.1|
           riboflavin biosynthesis protein-like protein
           [Arabidopsis thaliana]
          Length = 367

 Score =  248 bits (633), Expect = 1e-63
 Identities = 137/236 (58%), Positives = 162/236 (68%), Gaps = 7/236 (2%)
 Frame = +1

Query: 100 GSRISHRLRECNHQNXXXXXXXXXXXSCTQMIK--LSPSVAL-----FEKRLDSFSPSSI 258
           GSR+   L + NH N              Q+    L PS A+     F ++L     SS 
Sbjct: 5   GSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRMISSF 64

Query: 259 DFGHPLVGCIQPKSPLSQSSILSDCLSQQEDDGEPPSERLSSVAGGIVALGKFDALHIGH 438
                  G         +  IL +C SQ+EDD E P E LS V+GGIVALGKFDALHIGH
Sbjct: 65  GSHCRTSG---------EVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGH 115

Query: 439 RELAIQAAKVGAPFLLSFVGMAEILGWEPRAPIVAKYDRKRVLSSWAPYCGDVTPTEFEV 618
           REL IQA+++GAP+LLSFVGMAE+LGWEPRAPIVAK DR+RVL+SWA YCGD  P E+E+
Sbjct: 116 RELTIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEI 175

Query: 619 EFSKVRYLTPRQFVEKLSKKLGVRGVVAGKNYRFGYRASGDASELVRLCEEYGMGA 786
           EF+ VR+LTPRQFVEKLSK+L V GVVAG+NYRFGY+ASGDASELVRLCEE G+ A
Sbjct: 176 EFASVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITA 231


>gb|AFK43646.1| unknown [Lotus japonicus]
          Length = 374

 Score =  244 bits (624), Expect = 1e-62
 Identities = 121/174 (69%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
 Frame = +1

Query: 271 PLVGCIQ--PKSPLSQSSILSDCLSQQEDDGEPPSERLSSVAGGIVALGKFDALHIGHRE 444
           PL  C    P     +  +L DC SQQE++ E  S+  S+VAGGIVALGKFDALHIGHRE
Sbjct: 58  PLSHCFSATPSKSPGEFPLLFDCFSQQEEEREIMSDGKSAVAGGIVALGKFDALHIGHRE 117

Query: 445 LAIQAAKVGAPFLLSFVGMAEILGWEPRAPIVAKYDRKRVLSSWAPYCGDVTPTEFEVEF 624
           LAIQA+K G PFLLSF GMA++LGWE RAPIVAK DRKRVLSSWAPYCG++ P EF++EF
Sbjct: 118 LAIQASKAGQPFLLSFAGMAKVLGWENRAPIVAKSDRKRVLSSWAPYCGNMVPEEFQIEF 177

Query: 625 SKVRYLTPRQFVEKLSKKLGVRGVVAGKNYRFGYRASGDASELVRLCEEYGMGA 786
           S VR+L+PRQFVEKLS++L VRGVVAG+NYRFGY+A+GDA ELV+LCEE+GM A
Sbjct: 178 SSVRHLSPRQFVEKLSRELRVRGVVAGENYRFGYKAAGDALELVKLCEEFGMEA 231


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