BLASTX nr result

ID: Panax21_contig00017610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017610
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
emb|CBI27700.3| unnamed protein product [Vitis vinifera]               65   2e-08
ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    65   2e-08
ref|NP_001234711.1| protein SUPPRESSOR OF GENE SILENCING 3 [Sola...    61   3e-07
dbj|BAM78522.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]     59   9e-07

>ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|222862584|gb|EEF00091.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 53/90 (58%)
 Frame = -1

Query: 775 QEKREKVKQYLENPSSSEDQQSRLERAENFIKHQXXXXXXXXXXXXXXXXXXXXXXXEIM 596
           Q+KR++VK+   NPS++E+ +SR+E+ E FI+ Q                        + 
Sbjct: 208 QDKRQQVKELNANPSNTEEYRSRVEKVEEFIELQDKEMEEYVAERDNLIEEHGEKMTAMK 267

Query: 595 RRYRQEEVALEEEYDAKLTKLMEKYTSNQS 506
           RR+ +EE+ +E+EYDA+L  LM+KYT NQ+
Sbjct: 268 RRHLEEELEMEKEYDARLASLMKKYTPNQA 297


>emb|CBI27700.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -1

Query: 775 QEKREKVKQYLENPSSSED-QQSRLERAENFIKHQXXXXXXXXXXXXXXXXXXXXXXXEI 599
           QEKREKVKQ   NPS+ ED ++SR+E    FIK Q                        +
Sbjct: 379 QEKREKVKQSSGNPSAIEDPRRSRVEEVAKFIKFQDKEMENFVAEREELIRAHEEKVVAM 438

Query: 598 MRRYRQEEVALEEEYDAKLTKLMEKYTSNQS 506
            +R+ +EEV LE+E+D +L+KLMEKYTS+ S
Sbjct: 439 KQRHWEEEVGLEKEFDDELSKLMEKYTSDLS 469


>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -1

Query: 775 QEKREKVKQYLENPSSSED-QQSRLERAENFIKHQXXXXXXXXXXXXXXXXXXXXXXXEI 599
           QEKREKVKQ   NPS+ ED ++SR+E    FIK Q                        +
Sbjct: 628 QEKREKVKQSSGNPSAIEDPRRSRVEEVAKFIKFQDKEMENFVAEREELIRAHEEKVVAM 687

Query: 598 MRRYRQEEVALEEEYDAKLTKLMEKYTSNQS 506
            +R+ +EEV LE+E+D +L+KLMEKYTS+ S
Sbjct: 688 KQRHWEEEVGLEKEFDDELSKLMEKYTSDLS 718


>ref|NP_001234711.1| protein SUPPRESSOR OF GENE SILENCING 3 [Solanum lycopersicum]
           gi|189046708|sp|A5YVF1.1|SGS3_SOLLC RecName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 3; AltName:
           Full=SlSGS3 gi|148613844|gb|ABQ96272.1| SGS3-like
           protein [Solanum lycopersicum]
           gi|397529817|gb|AFO53519.1| suppressor of gene silencing
           3 protein [Solanum lycopersicum]
          Length = 633

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%)
 Frame = -1

Query: 775 QEKREKVKQYLENPSSSEDQQSRLERAENFIKHQXXXXXXXXXXXXXXXXXXXXXXXEIM 596
           QE+RE VKQ   N +S ED + R E+   FIK Q                        + 
Sbjct: 535 QEQREMVKQSNANTASVEDHRVRAEKVAKFIKLQDKEMEEFVEERENLMRTHDDRIAALR 594

Query: 595 RRYRQEEVALEEEYDAKLTKLMEKYTSNQSNE 500
           R+Y +EEV LE ++D +L+KLMEKY+  QS+E
Sbjct: 595 RKYWEEEVELERKFDLELSKLMEKYSPKQSDE 626


>dbj|BAM78522.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]
          Length = 635

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 36/90 (40%), Positives = 47/90 (52%)
 Frame = -1

Query: 775 QEKREKVKQYLENPSSSEDQQSRLERAENFIKHQXXXXXXXXXXXXXXXXXXXXXXXEIM 596
           QE+RE V+Q   N SS ED + R ER   FIK Q                       E+ 
Sbjct: 545 QEQREMVQQSNANTSSVEDHRVRAERVAKFIKLQDKEMEEFVEERENLMRSHEDRIAELR 604

Query: 595 RRYRQEEVALEEEYDAKLTKLMEKYTSNQS 506
           R+Y +EEV LE+++D +L KLMEKY+  QS
Sbjct: 605 RKYWEEEVELEKKFDLELAKLMEKYSPKQS 634


Top