BLASTX nr result

ID: Panax21_contig00017598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017598
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO47744.1| polygalacturonase-inhibiting protein [Gossypium h...    74   1e-11
ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 ...    74   2e-11
gb|ACJ85058.1| unknown [Medicago truncatula]                           74   2e-11
gb|ABK94260.1| unknown [Populus trichocarpa]                           74   2e-11
ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|1...    74   2e-11

>gb|ABO47744.1| polygalacturonase-inhibiting protein [Gossypium hirsutum]
          Length = 370

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = -3

Query: 360 ISSAMYIGHLDLSHNNLCGLIPEGLPLDRIDATSFEDNDCL*GHPPRTC 214
           +SSA ++GHLDLSHN+LCG IP G P D ++A+SF+ NDCL G+P +TC
Sbjct: 322 LSSAKFVGHLDLSHNHLCGTIPVGTPFDHLEASSFDSNDCLCGNPLKTC 370


>ref|XP_003599106.1| DNA-damage-repair/toleration protein DRT100 [Medicago truncatula]
           gi|355488154|gb|AES69357.1| DNA-damage-repair/toleration
           protein DRT100 [Medicago truncatula]
          Length = 369

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = -3

Query: 360 ISSAMYIGHLDLSHNNLCGLIPEGL--PLDRIDATSFEDNDCL*GHPPRTC 214
           +SSA YIGHLDLSHN+LCG IP G+  P D +DATSF +NDCL G+P +TC
Sbjct: 319 LSSAKYIGHLDLSHNHLCGSIPLGVGSPFDHLDATSFSNNDCLCGNPLKTC 369


>gb|ACJ85058.1| unknown [Medicago truncatula]
          Length = 369

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = -3

Query: 360 ISSAMYIGHLDLSHNNLCGLIPEGL--PLDRIDATSFEDNDCL*GHPPRTC 214
           +SSA YIGHLDLSHN+LCG IP G+  P D +DATSF +NDCL G+P +TC
Sbjct: 319 LSSAKYIGHLDLSHNHLCGSIPLGVGSPFDHLDATSFSNNDCLCGNPLKTC 369


>gb|ABK94260.1| unknown [Populus trichocarpa]
          Length = 365

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = -3

Query: 360 ISSAMYIGHLDLSHNNLCGLIPEGLPLDRIDATSFEDNDCL*GHPPRTC 214
           +SSA Y+GHLDLSHN+LCG IP G P D ++A+SF  NDCL G+P +TC
Sbjct: 317 LSSAAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNPLKTC 365


>ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|151936646|gb|ABS18952.1|
           DRT100 [Populus deltoides] gi|222849697|gb|EEE87244.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = -3

Query: 360 ISSAMYIGHLDLSHNNLCGLIPEGLPLDRIDATSFEDNDCL*GHPPRTC 214
           +SSA Y+GHLDLSHN+LCG IP G P D ++A+SF  NDCL G+P +TC
Sbjct: 317 LSSAAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNPLKTC 365


Top