BLASTX nr result
ID: Panax21_contig00017571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017571
(1663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEV41137.1| D6-type cyclin [Populus x canadensis] 278 2e-72
ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|1... 277 7e-72
ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinif... 257 7e-66
emb|CBI18003.3| unnamed protein product [Vitis vinifera] 255 2e-65
ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycin... 238 5e-60
>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
Length = 324
Score = 278 bits (712), Expect = 2e-72
Identities = 170/334 (50%), Positives = 215/334 (64%), Gaps = 9/334 (2%)
Frame = -3
Query: 1313 MELDLEHPLPLPFLTGDNNSQDLNFDS--SLFHIESQHMPSNTAYITTTNKINPEFDDNF 1140
M+ +LE+PL NS +L+FD+ SLF IES HMPS Y+ T +I D +
Sbjct: 1 MDFNLENPL--------TNSHELHFDTTPSLFLIESDHMPSKN-YLKTLKEI----DFDV 47
Query: 1139 SFRRQTISLIINLSHSFDPFLSYLAINYLHRFLSHQSIQLQEGKTWILKLLAVCCVSLAL 960
SFRR+ IS + +S +FDP LSYLA+NYL RFLS Q I + K W+LKLLAV CVSLA
Sbjct: 48 SFRREAISSVFRVSCNFDPSLSYLAVNYLDRFLSSQGIP--QPKPWVLKLLAVACVSLAA 105
Query: 959 KMRKTDQPVTVDIIQHDGGFIFDKQTILRMELLILGALKWRMRSITPXXXXXXXXXXXXX 780
KM++ + VT IQ DGGF+FD QTI +ME+LILGAL WRMRSITP
Sbjct: 106 KMKEAEFYVTD--IQGDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKP 163
Query: 779 KDPPLRQALKARATQIIFKSQLELKIWEFKPXXXXXXXXXXXSHELFPLQFQCFKKAIST 600
KDPPLRQALKARA +IIFK+Q ++ + EF+P HELFP+QF CF+KAIS
Sbjct: 164 KDPPLRQALKARACEIIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISI 223
Query: 599 CSYVNKVSFVRCNNVMQEIAMDGYESVLETVSSTNTPVNGLDRQWPCSSSESENRDTEYG 420
CS+VNK + ++C N MQE AMDGY+S + VSS++TPVN LDR + SSESEN +
Sbjct: 224 CSHVNKENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHF--LSSESENTNGTVV 281
Query: 419 TIGVE-------MRDFKRRKISSFRTTDETFQLS 339
I + +D KRRKIS+ ++T QLS
Sbjct: 282 MISSDGSNKTWPEKDIKRRKISAL-CNNQTVQLS 314
>ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|159025735|emb|CAN88868.1|
D6-type cyclin [Populus trichocarpa]
gi|222862981|gb|EEF00488.1| predicted protein [Populus
trichocarpa]
Length = 324
Score = 277 bits (708), Expect = 7e-72
Identities = 170/337 (50%), Positives = 216/337 (64%), Gaps = 12/337 (3%)
Frame = -3
Query: 1313 MELDLEHPLPLPFLTGDNNSQDLNFDS--SLFHIESQHMPSNTAYITTTNKINPEFDDNF 1140
M+ +LE+PL NS +L+FD+ SLF IES HMPS Y+ T +I D +
Sbjct: 1 MDFNLENPL--------TNSHELHFDTTPSLFLIESDHMPSKN-YLKTLKEI----DFDV 47
Query: 1139 SFRRQTISLIINLSHSFDPFLSYLAINYLHRFLSHQSIQLQEGKTWILKLLAVCCVSLAL 960
SFRR+ IS ++ +S +FDP LSYLA+NYL RFLS Q I + K W+ KLLAV CVSLA
Sbjct: 48 SFRREAISSVLRVSCNFDPSLSYLAVNYLDRFLSSQGIP--QPKPWVFKLLAVACVSLAA 105
Query: 959 KMRKTDQPVTVDIIQHDGGFIFDKQTILRMELLILGALKWRMRSITPXXXXXXXXXXXXX 780
KM++ + VT IQ DGGF+FD QTI +ME+LILGAL WRMRSITP
Sbjct: 106 KMKEAEFYVTD--IQGDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKP 163
Query: 779 KDPPLRQALKARATQIIFKSQLELKIWEFKPXXXXXXXXXXXSHELFPLQFQCFKKAIST 600
KDPPLRQALKARA +IIFK+Q ++ + EF+P HELFP+QF CF+KAIS
Sbjct: 164 KDPPLRQALKARACEIIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISI 223
Query: 599 CSYVNKVSFVRCNNVMQEIAMDGYESVLETVSSTNTPVNGLDRQWPCSSSESENRDTEYG 420
CSYVNK + ++C N MQE AMDGY+S + VSS++TPVN LDR + SSSESEN + G
Sbjct: 224 CSYVNKENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHF--SSSESENTN---G 278
Query: 419 TIGV----------EMRDFKRRKISSFRTTDETFQLS 339
T+ + + KRRKIS+ ++T Q S
Sbjct: 279 TVVMISSNGSNKTWPEKGIKRRKISAL-CNNQTVQFS 314
>ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinifera]
Length = 294
Score = 257 bits (656), Expect = 7e-66
Identities = 157/317 (49%), Positives = 199/317 (62%), Gaps = 2/317 (0%)
Frame = -3
Query: 1313 MELDLEHPLPLPFLTGDNNSQDLNFDS--SLFHIESQHMPSNTAYITTTNKINPEFDDNF 1140
ME DLE+PL +SQDL+ + SLF E+ HMPS Y + + + D +
Sbjct: 1 MEFDLENPL--------TSSQDLHSHAVASLFQAENHHMPS-IDYCGSLDSV----DCDV 47
Query: 1139 SFRRQTISLIINLSHSFDPFLSYLAINYLHRFLSHQSIQLQEGKTWILKLLAVCCVSLAL 960
SFRRQ IS I+ +S SFDPFLSYLAINYL RFLS ++ K WIL+LLAV CVSLA
Sbjct: 48 SFRRQAISSILQMSSSFDPFLSYLAINYLDRFLSRS--EMPSEKPWILRLLAVSCVSLAA 105
Query: 959 KMRKTDQPVTVDIIQHDGGFIFDKQTILRMELLILGALKWRMRSITPXXXXXXXXXXXXX 780
KM+KT+ ++ Q +GGFIFD +TI+RME+L+LGALKWRMRS+TP
Sbjct: 106 KMKKTE--FSLADFQGEGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKL 163
Query: 779 KDPPLRQALKARATQIIFKSQLELKIWEFKPXXXXXXXXXXXSHELFPLQFQCFKKAIST 600
KDPPL +ALKAR +II KSQ E+K+ +FKP HELFPLQF CF AIS
Sbjct: 164 KDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAASTLLYACHELFPLQFPCFMTAISN 223
Query: 599 CSYVNKVSFVRCNNVMQEIAMDGYESVLETVSSTNTPVNGLDRQWPCSSSESENRDTEYG 420
C YVNK + C + ++E+ + ++S+ VSS+++PVN LDR C SSESE
Sbjct: 224 CPYVNKEKMLCCYSAVREMEIKEFDSLYGVVSSSSSPVNVLDRH--CLSSESEKSH---- 277
Query: 419 TIGVEMRDFKRRKISSF 369
T+G E D KRRKIS F
Sbjct: 278 TMGAE-SDVKRRKISVF 293
>emb|CBI18003.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 255 bits (652), Expect = 2e-65
Identities = 156/315 (49%), Positives = 198/315 (62%), Gaps = 2/315 (0%)
Frame = -3
Query: 1313 MELDLEHPLPLPFLTGDNNSQDLNFDS--SLFHIESQHMPSNTAYITTTNKINPEFDDNF 1140
ME DLE+PL +SQDL+ + SLF E+ HMPS Y + + + D +
Sbjct: 1 MEFDLENPL--------TSSQDLHSHAVASLFQAENHHMPS-IDYCGSLDSV----DCDV 47
Query: 1139 SFRRQTISLIINLSHSFDPFLSYLAINYLHRFLSHQSIQLQEGKTWILKLLAVCCVSLAL 960
SFRRQ IS I+ +S SFDPFLSYLAINYL RFLS ++ K WIL+LLAV CVSLA
Sbjct: 48 SFRRQAISSILQMSSSFDPFLSYLAINYLDRFLSRS--EMPSEKPWILRLLAVSCVSLAA 105
Query: 959 KMRKTDQPVTVDIIQHDGGFIFDKQTILRMELLILGALKWRMRSITPXXXXXXXXXXXXX 780
KM+KT+ ++ Q +GGFIFD +TI+RME+L+LGALKWRMRS+TP
Sbjct: 106 KMKKTE--FSLADFQGEGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKL 163
Query: 779 KDPPLRQALKARATQIIFKSQLELKIWEFKPXXXXXXXXXXXSHELFPLQFQCFKKAIST 600
KDPPL +ALKAR +II KSQ E+K+ +FKP HELFPLQF CF AIS
Sbjct: 164 KDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAASTLLYACHELFPLQFPCFMTAISN 223
Query: 599 CSYVNKVSFVRCNNVMQEIAMDGYESVLETVSSTNTPVNGLDRQWPCSSSESENRDTEYG 420
C YVNK + C + ++E+ + ++S+ VSS+++PVN LDR C SSESE
Sbjct: 224 CPYVNKEKMLCCYSAVREMEIKEFDSLYGVVSSSSSPVNVLDRH--CLSSESEKSH---- 277
Query: 419 TIGVEMRDFKRRKIS 375
T+G E D KRRKIS
Sbjct: 278 TMGAE-SDVKRRKIS 291
>ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
Length = 329
Score = 238 bits (606), Expect = 5e-60
Identities = 152/321 (47%), Positives = 192/321 (59%), Gaps = 8/321 (2%)
Frame = -3
Query: 1313 MELDLEHPLPLPFLTGDNNSQDLNFD--SSLFHIESQHMPSNTAYITTTNKINPEFDDNF 1140
ME DLE+P ++L+ D S LF IES H PS T + D +
Sbjct: 1 MEFDLENPF-----------ENLHSDAVSYLFLIESDHTPSQNHSQTLKAR-----DLDI 44
Query: 1139 SFRRQTISLIINLSHSFDPFLSYLAINYLHRFLSHQSIQLQEGKTWILKLLAVCCVSLAL 960
S RR+ ISLI LS + DP LSYLAINYL RFL++Q I + K W+L+L+AV C+SLA+
Sbjct: 45 SVRRELISLISQLSCALDPVLSYLAINYLDRFLANQGIL--QPKPWVLRLIAVSCISLAV 102
Query: 959 KMRKTDQPVT---VDIIQHDGGFIFDKQTILRMELLILGALKWRMRSITPXXXXXXXXXX 789
KM +T+ P T + Q DGG IF+ QTI RME LILGAL+WRMRSITP
Sbjct: 103 KMMRTEYPFTDVQALLNQSDGGIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIAL 162
Query: 788 XXXKDPPLRQALKARATQIIFKSQLELKIWEFKPXXXXXXXXXXXSHELFPLQFQCFKKA 609
KD P+ Q LK RA++IIFKSQ E+++W FKP SHELFP Q+ F KA
Sbjct: 163 MGLKDLPMGQVLKNRASEIIFKSQREIRLWGFKPSIIAASALLCASHELFPFQYPSFLKA 222
Query: 608 ISTCSYVNKVSFVRCNNVMQEIAM-DGYESVLETVSSTNTPVNGLDRQWPCSSSESENRD 432
IS SYVNK S +C V+Q+IA+ + Y S L VSS++TP+N LD + S S+ N
Sbjct: 223 ISDSSYVNKESVEQCYKVIQDIAIEEEYSSALNGVSSSDTPINVLDHHFLSSESQKTNGI 282
Query: 431 TEYGTIGVE--MRDFKRRKIS 375
T TI V +RD KRRKI+
Sbjct: 283 TVANTIAVSSPLRDLKRRKIT 303