BLASTX nr result

ID: Panax21_contig00017553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017553
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   262   2e-68
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   257   6e-67
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   257   6e-67
ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   254   4e-66

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  262 bits (670), Expect = 2e-68
 Identities = 125/145 (86%), Positives = 133/145 (91%)
 Frame = +1

Query: 1    LGSGNAGQGYSFEEVKVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVL 180
            LG GNAGQGY+FEEVKVLFLILMDLCRRT+ALAHPLPVSQVGS NIQVRLHYI+GNYTVL
Sbjct: 1009 LGYGNAGQGYTFEEVKVLFLILMDLCRRTAALAHPLPVSQVGSSNIQVRLHYINGNYTVL 1068

Query: 181  PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDIGPVD 360
            PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRNMFGGPWSDPEDI   D
Sbjct: 1069 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDITSAD 1128

Query: 361  DTSRICSSSDSLDLRLPESCEVYYG 435
            DT R+ S +DSLD    E+C+VYYG
Sbjct: 1129 DTPRMSSYTDSLDFSSLENCDVYYG 1153


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1143

 Score =  257 bits (657), Expect = 6e-67
 Identities = 120/145 (82%), Positives = 133/145 (91%)
 Frame = +1

Query: 1    LGSGNAGQGYSFEEVKVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVL 180
            +G+GNAGQGY+ EEVKVLFLIL+DLCRRT++L HPLPVSQVGS NIQVRLHYIDGNYTVL
Sbjct: 897  IGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVL 956

Query: 181  PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDIGPVD 360
            PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNM+GGPWSD +D+GP D
Sbjct: 957  PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPND 1016

Query: 361  DTSRICSSSDSLDLRLPESCEVYYG 435
            D S++ +SSD LDL   E+C VYYG
Sbjct: 1017 DNSKLSNSSDPLDLNSLENCNVYYG 1041


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1220

 Score =  257 bits (657), Expect = 6e-67
 Identities = 120/145 (82%), Positives = 133/145 (91%)
 Frame = +1

Query: 1    LGSGNAGQGYSFEEVKVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVL 180
            +G+GNAGQGY+ EEVKVLFLIL+DLCRRT++L HPLPVSQVGS NIQVRLHYIDGNYTVL
Sbjct: 974  IGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVL 1033

Query: 181  PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDIGPVD 360
            PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNM+GGPWSD +D+GP D
Sbjct: 1034 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPND 1093

Query: 361  DTSRICSSSDSLDLRLPESCEVYYG 435
            D S++ +SSD LDL   E+C VYYG
Sbjct: 1094 DNSKLSNSSDPLDLNSLENCNVYYG 1118


>ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|222848775|gb|EEE86322.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  255 bits (651), Expect = 3e-66
 Identities = 123/145 (84%), Positives = 135/145 (93%)
 Frame = +1

Query: 1   LGSGNAGQGYSFEEVKVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVL 180
           +G+GNAGQGYSFEEV VLFLILMDLCRRT++L HPLPVSQVGS NIQVRLHYIDGNYTVL
Sbjct: 311 VGNGNAGQGYSFEEVTVLFLILMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVL 370

Query: 181 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDIGPVD 360
           PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRNMFGGPWSDPEDIG  D
Sbjct: 371 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDIGS-D 429

Query: 361 DTSRICSSSDSLDLRLPESCEVYYG 435
           DTS++ +S++SLD    E+C+VYYG
Sbjct: 430 DTSKL-NSTNSLDFSSLENCDVYYG 453


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
           vinifera]
          Length = 785

 Score =  254 bits (650), Expect = 4e-66
 Identities = 120/145 (82%), Positives = 132/145 (91%)
 Frame = +1

Query: 1   LGSGNAGQGYSFEEVKVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVL 180
           LGSGNAGQGY+FEEVKVLFLILMDLCRRT+AL HPLP+SQVGS NIQVRLHYIDG+YTVL
Sbjct: 540 LGSGNAGQGYTFEEVKVLFLILMDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVL 599

Query: 181 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDIGPVD 360
           PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPED+G VD
Sbjct: 600 PEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVD 659

Query: 361 DTSRICSSSDSLDLRLPESCEVYYG 435
           DT ++ + +D L+    E+ + YYG
Sbjct: 660 DTPKLSTYADPLESNSFENNDTYYG 684


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