BLASTX nr result

ID: Panax21_contig00017534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017534
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   704   0.0  
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   702   0.0  
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   685   0.0  
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   682   0.0  
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   667   0.0  

>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Vitis vinifera]
          Length = 572

 Score =  704 bits (1817), Expect = 0.0
 Identities = 340/438 (77%), Positives = 394/438 (89%)
 Frame = +3

Query: 297  HIKLKLGNSVSQCACLRHFSNPSGAAKFDFTDLTHPHTWYPNARRKKRIVTLHVGPTNSG 476
            H++L+    V  C  +R FS+ S  +K DF DLTHPHTWYPNARRK R V +HVGPTNSG
Sbjct: 34   HLELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHVGPTNSG 93

Query: 477  KTYHALKRLKCSSSGIYCGPLRLLAWEVAKKLNKAKVPCDLITGQERDEVDGAQHKSVTV 656
            KT+HALKRL+ SSSGIYCGPLRLLAWEVAK+LNKA VPCD+ITGQER+E+DGA+HK++TV
Sbjct: 94   KTHHALKRLESSSSGIYCGPLRLLAWEVAKRLNKANVPCDMITGQEREEIDGAKHKAMTV 153

Query: 657  EMADVTSDYDCAVIDEIQMLGCQTRGFSFTRALLGISVNELHLCGDAAAVPLVQEILKAT 836
            EMADVTSDY CAVIDEIQMLGC+TRGFSFTRALLGIS +ELHLCGD ++VPL+Q ILK T
Sbjct: 154  EMADVTSDYHCAVIDEIQMLGCRTRGFSFTRALLGISTDELHLCGDVSSVPLIQGILKVT 213

Query: 837  GDDVKVQHYERLSPLVPLHVPLGSFSNIKTGDCIVTFSRRKIYNLKKKIETGRKHHCSVV 1016
            GDD +VQ+YERLSPLVPL+VPL SFS+I+TGDCIVTFSRR+IY LK++IE G KH CSVV
Sbjct: 214  GDDFEVQYYERLSPLVPLNVPLRSFSDIQTGDCIVTFSRRQIYKLKRQIENGGKHLCSVV 273

Query: 1017 YGSLPPVTRTRQATMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTLEKFDGVKMRELT 1196
            YGSLPP TRTRQATMFNDA+SEFDVLVASDAIGMGLNLNISRIIFSTL+KFDG++ R+LT
Sbjct: 274  YGSLPPETRTRQATMFNDATSEFDVLVASDAIGMGLNLNISRIIFSTLKKFDGIEERDLT 333

Query: 1197 IPEIKQIAGRAGRYGSKFPAGEVTCLDSEDLPLLHSSLDTPSPILERAGLFPTFDLLFMY 1376
            +PEIKQIAGRAGR+GSKFP GEVTC++ +DLPLLHSSL + SP+LERAGLFPTFDLLFM+
Sbjct: 334  VPEIKQIAGRAGRFGSKFPDGEVTCMNVKDLPLLHSSLKSLSPVLERAGLFPTFDLLFMH 393

Query: 1377 SRLNLKSGLYQILEHFIENAKLSANYFMANCEELLKVAAVIDELPLGLQDKYLFCISPVD 1556
            SR +    LYQ+LEHF++NAKLS+NYF+A+CEE+LKVAA++DELPLGL DKYLF ISPVD
Sbjct: 394  SRFHPTKSLYQMLEHFVDNAKLSSNYFIADCEEMLKVAAIVDELPLGLHDKYLFVISPVD 453

Query: 1557 MNDDISSQGLIQFAQNYS 1610
            MN+DISSQGLIQFAQ Y+
Sbjct: 454  MNNDISSQGLIQFAQTYA 471


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  702 bits (1812), Expect = 0.0
 Identities = 350/462 (75%), Positives = 397/462 (85%), Gaps = 2/462 (0%)
 Frame = +3

Query: 231  RRFSPFDVSGAILHENIEARWLHIKLKLGNSVSQCACLRHFS--NPSGAAKFDFTDLTHP 404
            R+ S   VSG IL + ++    H++ +LG     C  LR +S  N + A KFDF DLT P
Sbjct: 9    RQVSTLGVSG-ILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFDFLDLTCP 67

Query: 405  HTWYPNARRKKRIVTLHVGPTNSGKTYHALKRLKCSSSGIYCGPLRLLAWEVAKKLNKAK 584
            H WYP ARRK R + LHVGPTNSGKTYHALK+L+ S SG+YCGPLRLLAWEVAK+LNKA 
Sbjct: 68   HAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLESSPSGVYCGPLRLLAWEVAKRLNKAN 127

Query: 585  VPCDLITGQERDEVDGAQHKSVTVEMADVTSDYDCAVIDEIQMLGCQTRGFSFTRALLGI 764
            VPCDLITGQER+EV+GA+HK+VTVEMADVTS+Y CAV+DEIQMLGC TRGFSFTRALLGI
Sbjct: 128  VPCDLITGQEREEVNGAKHKAVTVEMADVTSNYSCAVVDEIQMLGCMTRGFSFTRALLGI 187

Query: 765  SVNELHLCGDAAAVPLVQEILKATGDDVKVQHYERLSPLVPLHVPLGSFSNIKTGDCIVT 944
            S +ELHLCGD AAVPL+QEILK TGDD+ VQ+YERLSPLVP   PLGSF NI+TGDCIVT
Sbjct: 188  SADELHLCGDPAAVPLIQEILKPTGDDIHVQYYERLSPLVPSQKPLGSFKNIQTGDCIVT 247

Query: 945  FSRRKIYNLKKKIETGRKHHCSVVYGSLPPVTRTRQATMFNDASSEFDVLVASDAIGMGL 1124
            FSRR+IY LK +IE GRKH CSVVYGSLPP TRTRQATMFNDASSEFDVLVASDAIGMGL
Sbjct: 248  FSRREIYKLKGQIERGRKHLCSVVYGSLPPETRTRQATMFNDASSEFDVLVASDAIGMGL 307

Query: 1125 NLNISRIIFSTLEKFDGVKMRELTIPEIKQIAGRAGRYGSKFPAGEVTCLDSEDLPLLHS 1304
            NLNISRIIFST++KFDGV+MR+LTI E+KQIAGRAGRYGS FP GEVTCL ++DLPLLHS
Sbjct: 308  NLNISRIIFSTMKKFDGVEMRDLTISEVKQIAGRAGRYGSDFPVGEVTCLHADDLPLLHS 367

Query: 1305 SLDTPSPILERAGLFPTFDLLFMYSRLNLKSGLYQILEHFIENAKLSANYFMANCEELLK 1484
            SL +PSPILE AGLFPTFDL+FMYSRL+ K GLY+I+EHF+ENAKLS NYF+ANCEE+LK
Sbjct: 368  SLKSPSPILECAGLFPTFDLIFMYSRLHPKKGLYRIMEHFLENAKLSENYFIANCEEMLK 427

Query: 1485 VAAVIDELPLGLQDKYLFCISPVDMNDDISSQGLIQFAQNYS 1610
            VAAV+D LP+ L DKYLF ISPVDM ++ISSQGL QFAQNY+
Sbjct: 428  VAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQFAQNYA 469


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 565

 Score =  685 bits (1767), Expect = 0.0
 Identities = 325/420 (77%), Positives = 381/420 (90%)
 Frame = +3

Query: 351  FSNPSGAAKFDFTDLTHPHTWYPNARRKKRIVTLHVGPTNSGKTYHALKRLKCSSSGIYC 530
            +S+ +G  + DFTDLT PHTWYP AR+K R + LHVGPTNSGKT+HALK+L+ S+SG+YC
Sbjct: 45   YSSRNGPIRNDFTDLTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYC 104

Query: 531  GPLRLLAWEVAKKLNKAKVPCDLITGQERDEVDGAQHKSVTVEMADVTSDYDCAVIDEIQ 710
            GPLRLLAWE+AK+LNKA+VPCDLITGQERDEVDGA HK+VTVEM DV++DY CAVIDEIQ
Sbjct: 105  GPLRLLAWEIAKRLNKAQVPCDLITGQERDEVDGANHKAVTVEMVDVSADYQCAVIDEIQ 164

Query: 711  MLGCQTRGFSFTRALLGISVNELHLCGDAAAVPLVQEILKATGDDVKVQHYERLSPLVPL 890
            M+GC TRG+SFTRALLGI+ +ELHLCGD AAVPL+QEI+K TGD+++VQ YERLSPLVPL
Sbjct: 165  MIGCITRGYSFTRALLGIAADELHLCGDPAAVPLIQEIMKITGDEIEVQFYERLSPLVPL 224

Query: 891  HVPLGSFSNIKTGDCIVTFSRRKIYNLKKKIETGRKHHCSVVYGSLPPVTRTRQATMFND 1070
             VPLGSFSN++ GDCIVTFSR++IY LKK+IE   KH CSVVYGSLPP TRTRQA+MFND
Sbjct: 225  KVPLGSFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQASMFND 284

Query: 1071 ASSEFDVLVASDAIGMGLNLNISRIIFSTLEKFDGVKMRELTIPEIKQIAGRAGRYGSKF 1250
            ASSEFDVLVASDAIGMGLNLNISRIIFST++KFDG ++R+LT+PEIKQIAGRAGRYGS F
Sbjct: 285  ASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLTVPEIKQIAGRAGRYGSNF 344

Query: 1251 PAGEVTCLDSEDLPLLHSSLDTPSPILERAGLFPTFDLLFMYSRLNLKSGLYQILEHFIE 1430
            P GEVTC+D EDLPLLHSSL++PSPILERAG+ PTFDL++MYSRL+ ++G YQIL HF++
Sbjct: 345  PVGEVTCMDEEDLPLLHSSLNSPSPILERAGILPTFDLMYMYSRLHPRNGFYQILAHFLD 404

Query: 1431 NAKLSANYFMANCEELLKVAAVIDELPLGLQDKYLFCISPVDMNDDISSQGLIQFAQNYS 1610
            NAKLS NYF+ NCE+LLKVAAVIDELPLGL +KYLFCISP DM+D+ISSQGL QFA+NY+
Sbjct: 405  NAKLSENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQFAENYA 464


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 600

 Score =  682 bits (1760), Expect = 0.0
 Identities = 328/435 (75%), Positives = 389/435 (89%)
 Frame = +3

Query: 306  LKLGNSVSQCACLRHFSNPSGAAKFDFTDLTHPHTWYPNARRKKRIVTLHVGPTNSGKTY 485
            L LG + ++   +  +S+ +G  + DFTDLT PHTWYP ARRK R V LHVGPTNSGKT+
Sbjct: 68   LSLGGAANK---VHPYSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPTNSGKTH 124

Query: 486  HALKRLKCSSSGIYCGPLRLLAWEVAKKLNKAKVPCDLITGQERDEVDGAQHKSVTVEMA 665
            HALK+L+ S+SG+YCGPLRLLAWE+AK+LNKA+VPCDLITGQER+EVDGA HK+VTVEMA
Sbjct: 125  HALKQLESSASGVYCGPLRLLAWEIAKRLNKAQVPCDLITGQEREEVDGANHKAVTVEMA 184

Query: 666  DVTSDYDCAVIDEIQMLGCQTRGFSFTRALLGISVNELHLCGDAAAVPLVQEILKATGDD 845
            D+++DY CAVIDEIQM+GC TRG+SFTRALLGI+ +ELHLCGD AAVPL+QEILK TGD+
Sbjct: 185  DLSADYQCAVIDEIQMIGCTTRGYSFTRALLGIAADELHLCGDPAAVPLIQEILKITGDE 244

Query: 846  VKVQHYERLSPLVPLHVPLGSFSNIKTGDCIVTFSRRKIYNLKKKIETGRKHHCSVVYGS 1025
            ++VQ YERLSPLVPL+VPLGSFSN++ GDCIVTFSR++IY LKK+IE   KH CSVVYGS
Sbjct: 245  IEVQFYERLSPLVPLNVPLGSFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLCSVVYGS 304

Query: 1026 LPPVTRTRQATMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTLEKFDGVKMRELTIPE 1205
            LPP TRTRQA+MFNDASSEFDVLVASDAIGMGLNLNISRIIFST++KFDG ++R+L++PE
Sbjct: 305  LPPETRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLSVPE 364

Query: 1206 IKQIAGRAGRYGSKFPAGEVTCLDSEDLPLLHSSLDTPSPILERAGLFPTFDLLFMYSRL 1385
            IKQIAGRAGRYGS FP GEVTC+D EDL LLHSSL++PSPILERAGL PTFDL++MYSRL
Sbjct: 365  IKQIAGRAGRYGSNFPVGEVTCMDEEDLLLLHSSLNSPSPILERAGLLPTFDLMYMYSRL 424

Query: 1386 NLKSGLYQILEHFIENAKLSANYFMANCEELLKVAAVIDELPLGLQDKYLFCISPVDMND 1565
            + ++G YQIL HF+++AKLS NYF+ NCE+LLKVAAVIDELPLGL +KYLFCISP DM+D
Sbjct: 425  HPRNGFYQILAHFLDHAKLSENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDD 484

Query: 1566 DISSQGLIQFAQNYS 1610
            +ISSQGL QFA+NY+
Sbjct: 485  EISSQGLTQFAENYA 499


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
            gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
            helicase, putative [Ricinus communis]
          Length = 547

 Score =  667 bits (1722), Expect = 0.0
 Identities = 337/461 (73%), Positives = 379/461 (82%)
 Frame = +3

Query: 228  RRRFSPFDVSGAILHENIEARWLHIKLKLGNSVSQCACLRHFSNPSGAAKFDFTDLTHPH 407
            +R+ S   +S  +  EN E   LH + K G   S     R + + +G  K DFTDLT PH
Sbjct: 10   QRKVSSLGISRLLNAENGEPFQLHAEFKFGALFSVHTLTRLYRSDNGKPKIDFTDLTCPH 69

Query: 408  TWYPNARRKKRIVTLHVGPTNSGKTYHALKRLKCSSSGIYCGPLRLLAWEVAKKLNKAKV 587
            +WYP+AR+K R VTLHVGPTNSGKT+HALKRL  S SGIYCGPLRLLAWEVA KLNK +V
Sbjct: 70   SWYPSARKKHRKVTLHVGPTNSGKTHHALKRLASSPSGIYCGPLRLLAWEVANKLNKGQV 129

Query: 588  PCDLITGQERDEVDGAQHKSVTVEMADVTSDYDCAVIDEIQMLGCQTRGFSFTRALLGIS 767
            PCDLITGQER+EVDGA+HK+VTVEMADVTSDY CAV+DEIQM+GC+TRGFSFTRALLGIS
Sbjct: 130  PCDLITGQEREEVDGAKHKAVTVEMADVTSDYSCAVVDEIQMVGCKTRGFSFTRALLGIS 189

Query: 768  VNELHLCGDAAAVPLVQEILKATGDDVKVQHYERLSPLVPLHVPLGSFSNIKTGDCIVTF 947
             +ELHLCGD AAVPL+QEILK TGDD                        IKTGDCIVTF
Sbjct: 190  ADELHLCGDPAAVPLIQEILKVTGDD------------------------IKTGDCIVTF 225

Query: 948  SRRKIYNLKKKIETGRKHHCSVVYGSLPPVTRTRQATMFNDASSEFDVLVASDAIGMGLN 1127
            SRR+IY LKK IE+  KH CSVVYGSLPP TRTRQATMFNDASSEFDVLVASDAIGMGLN
Sbjct: 226  SRREIYRLKKIIESAGKHLCSVVYGSLPPETRTRQATMFNDASSEFDVLVASDAIGMGLN 285

Query: 1128 LNISRIIFSTLEKFDGVKMRELTIPEIKQIAGRAGRYGSKFPAGEVTCLDSEDLPLLHSS 1307
            LNISRIIFST++KFDGV+MR LT+PEIKQIAGRAGRYGS +PAGEVTCLD++DL LLHSS
Sbjct: 286  LNISRIIFSTMKKFDGVEMRYLTVPEIKQIAGRAGRYGSNYPAGEVTCLDADDLSLLHSS 345

Query: 1308 LDTPSPILERAGLFPTFDLLFMYSRLNLKSGLYQILEHFIENAKLSANYFMANCEELLKV 1487
            L++PSP LE AGLFPTFDL+FMYSRL+ K GLYQILEHF+ENAKLS NYF+A+CEE+LKV
Sbjct: 346  LESPSPALESAGLFPTFDLMFMYSRLHPKKGLYQILEHFVENAKLSPNYFIADCEEVLKV 405

Query: 1488 AAVIDELPLGLQDKYLFCISPVDMNDDISSQGLIQFAQNYS 1610
            AAVIDE+PL L DKYLFCISPVDMND+ISSQGL QFA+NY+
Sbjct: 406  AAVIDEMPLSLNDKYLFCISPVDMNDEISSQGLTQFAENYA 446


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