BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017517
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-109
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-103
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-103
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,...   374   e-101

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  399 bits (1024), Expect = e-109
 Identities = 195/256 (76%), Positives = 222/256 (86%)
 Frame = +2

Query: 2   AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
           A+ VFD + S+SVY  NALLRGNV+ G R +RE L T+S MRELGVELNVYSFSC+IKSF
Sbjct: 205 ARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSF 264

Query: 182 AGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWG 361
           AG++A+ QGLK HALL+KNGL  S ILRTSLIDMYFKCGK+KLA  +FEE+ ERDVVVWG
Sbjct: 265 AGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWG 324

Query: 362 AMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKT 541
           AMIAGF HNRLQREALEY+RWM +EG+ PNS I+T ILPVIGEV A K+G+EVHAYV+KT
Sbjct: 325 AMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKT 384

Query: 542 KHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRS 721
           K YSKQ+FIQSAL+DMYCKC DM SGR VFY S ERNA+SWTAL+SGYVSNGRL+QALRS
Sbjct: 385 KSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRS 444

Query: 722 IVWMQQEGLKPDVVTV 769
           I WMQQEG +PDVVTV
Sbjct: 445 IAWMQQEGFRPDVVTV 460



 Score =  134 bits (338), Expect = 2e-29
 Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 2/258 (0%)
 Frame = +2

Query: 2    AKQVFDELPSRSVYPRNALLRGNVVLG-GRQHREVLHTFSVMRELGVELNVYSFSCLIKS 178
            A+ +F+E+  R V    A++ G    G  R  RE L     MR  G+  N    + ++  
Sbjct: 308  ARLMFEEIVERDVVVWGAMIAG---FGHNRLQREALEYLRWMRREGICPNSVIMTTILPV 364

Query: 179  FAGSSAYHQGLKTHALLVKN-GLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVV 355
                 A+  G + HA +VK       + ++++LIDMY KCG +    +VF    ER+ V 
Sbjct: 365  IGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVS 424

Query: 356  WGAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVI 535
            W A+++G+  N    +AL  + WM +EG  P+   +  +LPV  E+ A + G+E+H+Y +
Sbjct: 425  WTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAV 484

Query: 536  KTKHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQAL 715
            K   +   + I ++L+ MY KC ++     +F G   RN ISWTA++  YV NG L +A+
Sbjct: 485  K-NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAV 543

Query: 716  RSIVWMQQEGLKPDVVTV 769
                 MQ    +PD V +
Sbjct: 544  GVFRSMQLSKHRPDSVAM 561



 Score =  116 bits (290), Expect = 6e-24
 Identities = 71/254 (27%), Positives = 127/254 (50%)
 Frame = +2

Query: 5    KQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSFA 184
            +QVF     R+     AL+ G V  G     + L + + M++ G   +V + + ++   A
Sbjct: 411  RQVFYASTERNAVSWTALMSGYVSNGRLD--QALRSIAWMQQEGFRPDVVTVATVLPVCA 468

Query: 185  GSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWGA 364
               A  QG + H+  VKNG   ++ + TSL+ MY KCG +  + ++F+ M+ R+V+ W A
Sbjct: 469  ELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTA 528

Query: 365  MIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKTK 544
            MI  +  N    EA+   R M      P+S  +  IL + GE+   K+G+E+H  ++K K
Sbjct: 529  MIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILK-K 587

Query: 545  HYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRSI 724
             +    F+ + ++ MY K   +   ++ F     + +++WTA++  Y  N   + A+   
Sbjct: 588  DFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLF 647

Query: 725  VWMQQEGLKPDVVT 766
              MQ +G  P+  T
Sbjct: 648  HQMQSDGFIPNHYT 661



 Score =  111 bits (277), Expect = 2e-22
 Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
 Frame = +2

Query: 95  REVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLKTHALLVKNGLGSSLILRTSL 274
           +E L       + G+ +N  +FS L+++   S +   G + H  +  NGL ++  LRT L
Sbjct: 133 KEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKL 192

Query: 275 IDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAG--FAHNRLQREALEYVRWMIKEGVDP 448
           + MY  CG ++ A  VF+ +  + V  W A++ G   +  R  REAL     M + GV+ 
Sbjct: 193 VHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVEL 252

Query: 449 NSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQSALVDMYCKCRDMGSGRMV 628
           N    + ++      +A + G + HA +IK       + ++++L+DMY KC  +   R++
Sbjct: 253 NVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSI-LRTSLIDMYFKCGKIKLARLM 311

Query: 629 FYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKPDVV 763
           F   +ER+ + W A+++G+  N    +AL  + WM++EG+ P+ V
Sbjct: 312 FEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSV 356


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score =  379 bits (974), Expect = e-103
 Identities = 183/256 (71%), Positives = 218/256 (85%)
 Frame = +2

Query: 2   AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
           A+++FD LP  SVYP NALLRG VV G RQ+ +VL T++ MR LGVELNVYSFS +IKSF
Sbjct: 167 AQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSF 226

Query: 182 AGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWG 361
           AG+ A+ QGLKTH LL+KNGL  + ILRTSLIDMYFKCGKV+LA RVFEE+ ERDVVVWG
Sbjct: 227 AGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWG 286

Query: 362 AMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKT 541
           AM+AGFAHNRLQRE LEYVRWM++EGV PNS ++TI++PVIGEV AR++GQE HAYV+KT
Sbjct: 287 AMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKT 346

Query: 542 KHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRS 721
           K YSK + +QS+L+DMYCKC DM S R VFYGS ERN + WTAL+SGY +NG+LEQALRS
Sbjct: 347 KSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRS 406

Query: 722 IVWMQQEGLKPDVVTV 769
            +WMQQEG +PDVVT+
Sbjct: 407 TIWMQQEGFRPDVVTL 422



 Score =  150 bits (378), Expect = 4e-34
 Identities = 95/257 (36%), Positives = 140/257 (54%), Gaps = 1/257 (0%)
 Frame = +2

Query: 2    AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
            A +VF+E+P R V    A+L G      R  REVL     M E GV+ N    + +I   
Sbjct: 270  ACRVFEEIPERDVVVWGAMLAG--FAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVI 327

Query: 182  AGSSAYHQGLKTHALLVKNGLGSSLI-LRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVW 358
                A   G + HA +VK    S L+ +++SLIDMY KCG +  A RVF   +ER+VV W
Sbjct: 328  GEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCW 387

Query: 359  GAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIK 538
             A+++G+A N    +AL    WM +EG  P+   L  +LPV  ++ A + G+++HAY +K
Sbjct: 388  TALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALK 447

Query: 539  TKHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALR 718
               +   + + S+L+ MY KC  +   R +F    +RN ISWTA++  Y+ NG L +AL 
Sbjct: 448  -HWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALG 506

Query: 719  SIVWMQQEGLKPDVVTV 769
             I  MQ    +PD V +
Sbjct: 507  VIRSMQLSKHRPDSVAI 523



 Score =  107 bits (266), Expect = 4e-21
 Identities = 69/238 (28%), Positives = 124/238 (52%)
 Frame = +2

Query: 2    AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
            A++VF     R+V    AL+ G    G  +  + L +   M++ G   +V + + ++   
Sbjct: 372  ARRVFYGSKERNVVCWTALMSGYAANGKLE--QALRSTIWMQQEGFRPDVVTLATVLPVC 429

Query: 182  AGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWG 361
            A   A  QG + HA  +K+    ++ + +SL+ MY KCG V+ + R+F+ ME+R+V+ W 
Sbjct: 430  AQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWT 489

Query: 362  AMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKT 541
            AMI  +  N    EAL  +R M      P+S  +  +L V GE    K+G+E+H  ++K 
Sbjct: 490  AMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILK- 548

Query: 542  KHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQAL 715
            + ++   F+ + L++MY    D+    +VF     + +++WTAL+  Y  N   + A+
Sbjct: 549  RDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAV 606



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 2/227 (0%)
 Frame = +2

Query: 95  REVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLKTHALLVKNGLGSSLILRTSL 274
           +E L     + + G+ ++  +FS ++ +   + +  QG + H  +  NGL ++  LRT L
Sbjct: 95  KEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKL 154

Query: 275 IDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAG--FAHNRLQREALEYVRWMIKEGVDP 448
           + MY  CG ++ A ++F+ +    V  W A++ G   +  R   + L+    M   GV+ 
Sbjct: 155 VHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVEL 214

Query: 449 NSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQSALVDMYCKCRDMGSGRMV 628
           N    + ++       A   G + H  +IK       + ++++L+DMY KC  +     V
Sbjct: 215 NVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYI-LRTSLIDMYFKCGKVRLACRV 273

Query: 629 FYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKPDVVTV 769
           F    ER+ + W A+L+G+  N    + L  + WM +EG+KP+ V +
Sbjct: 274 FEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVM 320


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  378 bits (970), Expect = e-103
 Identities = 182/256 (71%), Positives = 219/256 (85%)
 Frame = +2

Query: 2   AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
           A+++FDE  S+SVYP NALLRG V+ G R +R +L T++ MR LGVELNVYSF+ +IKSF
Sbjct: 168 AQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSF 227

Query: 182 AGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWG 361
           AG+SA+ QGLK H LL+KNGL  S +L T+L+DMYFKCGK+KLA ++F E+ ERDVVVWG
Sbjct: 228 AGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWG 287

Query: 362 AMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKT 541
           ++IAGFAHNRLQREALEY R MI +G+ PNS ILT ILPVIGE+ AR++GQEVHAYVIKT
Sbjct: 288 SIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKT 347

Query: 542 KHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRS 721
           K YSKQ+FIQSAL+DMYCKC D+GSGR VFY SMERNAI WTAL+SGY  NGRLEQA+RS
Sbjct: 348 KSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRS 407

Query: 722 IVWMQQEGLKPDVVTV 769
           ++WMQQEG +PD+VTV
Sbjct: 408 VIWMQQEGFRPDIVTV 423



 Score =  127 bits (319), Expect = 3e-27
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
 Frame = +2

Query: 2    AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
            A+Q+F E+  R V    +++ G      R  RE L     M + G+  N    + ++   
Sbjct: 271  ARQMFGEITERDVVVWGSIIAG--FAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVI 328

Query: 182  AGSSAYHQGLKTHALLVKN-GLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVW 358
                A   G + HA ++K       + ++++LIDMY KCG +     VF    ER+ + W
Sbjct: 329  GEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICW 388

Query: 359  GAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIK 538
             A+++G+A N    +A+  V WM +EG  P+   +  ILPV  ++ A + G+E+HAY +K
Sbjct: 389  TALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMK 448

Query: 539  TKHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALR 718
               +   + I S+L+ MY KC  M     +F G  +RN I WTA++  Y+ N    +A+ 
Sbjct: 449  -NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAID 507

Query: 719  SIVWMQQEGLKPDVVTV 769
                MQ    +PD VT+
Sbjct: 508  IFRAMQLSKHRPDTVTM 524



 Score =  109 bits (272), Expect = 7e-22
 Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 4/244 (1%)
 Frame = +2

Query: 47   RNAL----LRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLK 214
            RNA+    L     L GR  + V     + +E G   ++ + + ++   A   A   G +
Sbjct: 383  RNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDIVTVATILPVCAQLRALRPGKE 441

Query: 215  THALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAGFAHNRL 394
             HA  +KN    ++ + +SL+ MY KCG +    ++F  ME+R+V++W AMI  +  N+ 
Sbjct: 442  IHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQC 501

Query: 395  QREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQS 574
              EA++  R M      P++  ++ IL +  E    K+G+E+H  V+K K +    F+ +
Sbjct: 502  PHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSA 560

Query: 575  ALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKP 754
             LV +Y KC  +   +MVF     +  ++WTA++  Y  +G  ++A+     M+  G+ P
Sbjct: 561  ELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISP 620

Query: 755  DVVT 766
            +  T
Sbjct: 621  NHFT 624



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
 Frame = +2

Query: 95  REVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLKTHALLVKNGLGSSLILRTSL 274
           +E L     + + G+ +N  +FS LI +   + +     + HA +  NGL ++  +RT L
Sbjct: 96  KEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRL 155

Query: 275 IDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAG--FAHNRLQREALEYVRWMIKEGVDP 448
           + MY  CG ++ A ++F+E   + V  W A++ G   A  R  R  L     M + GV+ 
Sbjct: 156 VHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVEL 215

Query: 449 NSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQSALVDMYCKCRDMGSGRMV 628
           N      I+      SA   G + H  +IK       L + + LVDMY KC  +   R +
Sbjct: 216 NVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSL-LGTTLVDMYFKCGKIKLARQM 274

Query: 629 FYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKPDVV 763
           F    ER+ + W ++++G+  N    +AL     M  +G++P+ V
Sbjct: 275 FGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSV 319


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  378 bits (970), Expect = e-103
 Identities = 182/256 (71%), Positives = 219/256 (85%)
 Frame = +2

Query: 2   AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
           A+++FDE  S+SVYP NALLRG V+ G R +R +L T++ MR LGVELNVYSF+ +IKSF
Sbjct: 168 AQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSF 227

Query: 182 AGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWG 361
           AG+SA+ QGLK H LL+KNGL  S +L T+L+DMYFKCGK+KLA ++F E+ ERDVVVWG
Sbjct: 228 AGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWG 287

Query: 362 AMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKT 541
           ++IAGFAHNRLQREALEY R MI +G+ PNS ILT ILPVIGE+ AR++GQEVHAYVIKT
Sbjct: 288 SIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKT 347

Query: 542 KHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRS 721
           K YSKQ+FIQSAL+DMYCKC D+GSGR VFY SMERNAI WTAL+SGY  NGRLEQA+RS
Sbjct: 348 KSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRS 407

Query: 722 IVWMQQEGLKPDVVTV 769
           ++WMQQEG +PD+VTV
Sbjct: 408 VIWMQQEGFRPDIVTV 423



 Score =  127 bits (319), Expect = 3e-27
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
 Frame = +2

Query: 2    AKQVFDELPSRSVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSF 181
            A+Q+F E+  R V    +++ G      R  RE L     M + G+  N    + ++   
Sbjct: 271  ARQMFGEITERDVVVWGSIIAG--FAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVI 328

Query: 182  AGSSAYHQGLKTHALLVKN-GLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVW 358
                A   G + HA ++K       + ++++LIDMY KCG +     VF    ER+ + W
Sbjct: 329  GEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICW 388

Query: 359  GAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIK 538
             A+++G+A N    +A+  V WM +EG  P+   +  ILPV  ++ A + G+E+HAY +K
Sbjct: 389  TALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMK 448

Query: 539  TKHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALR 718
               +   + I S+L+ MY KC  M     +F G  +RN I WTA++  Y+ N    +A+ 
Sbjct: 449  -NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAID 507

Query: 719  SIVWMQQEGLKPDVVTV 769
                MQ    +PD VT+
Sbjct: 508  IFRAMQLSKHRPDTVTM 524



 Score =  109 bits (272), Expect = 7e-22
 Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 4/244 (1%)
 Frame = +2

Query: 47   RNAL----LRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLK 214
            RNA+    L     L GR  + V     + +E G   ++ + + ++   A   A   G +
Sbjct: 383  RNAICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDIVTVATILPVCAQLRALRPGKE 441

Query: 215  THALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAGFAHNRL 394
             HA  +KN    ++ + +SL+ MY KCG +    ++F  ME+R+V++W AMI  +  N+ 
Sbjct: 442  IHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQC 501

Query: 395  QREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQS 574
              EA++  R M      P++  ++ IL +  E    K+G+E+H  V+K K +    F+ +
Sbjct: 502  PHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSA 560

Query: 575  ALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKP 754
             LV +Y KC  +   +MVF     +  ++WTA++  Y  +G  ++A+     M+  G+ P
Sbjct: 561  ELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISP 620

Query: 755  DVVT 766
            +  T
Sbjct: 621  NHFT 624



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
 Frame = +2

Query: 95  REVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLKTHALLVKNGLGSSLILRTSL 274
           +E L     + + G+ +N  +FS LI +   + +     + HA +  NGL ++  +RT L
Sbjct: 96  KEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRL 155

Query: 275 IDMYFKCGKVKLAHRVFEEMEERDVVVWGAMIAG--FAHNRLQREALEYVRWMIKEGVDP 448
           + MY  CG ++ A ++F+E   + V  W A++ G   A  R  R  L     M + GV+ 
Sbjct: 156 VHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVEL 215

Query: 449 NSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQSALVDMYCKCRDMGSGRMV 628
           N      I+      SA   G + H  +IK       L + + LVDMY KC  +   R +
Sbjct: 216 NVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSL-LGTTLVDMYFKCGKIKLARQM 274

Query: 629 FYGSMERNAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKPDVV 763
           F    ER+ + W ++++G+  N    +AL     M  +G++P+ V
Sbjct: 275 FGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSV 319


>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  374 bits (960), Expect = e-101
 Identities = 186/256 (72%), Positives = 213/256 (83%), Gaps = 3/256 (1%)
 Frame = +2

Query: 2   AKQVFDELPSR-SVYPRNALLRGNVVLGGRQHREVLHTFSVMRELGVELNVYSFSCLIKS 178
           AK VF E  S  SVYP NALLRG V+ GG+++ +V+  +  MRELGVELNVYSFS +IKS
Sbjct: 169 AKMVFGECTSSTSVYPWNALLRGTVISGGKRYNDVVSAYGQMRELGVELNVYSFSNVIKS 228

Query: 179 FAGSSAYHQGLKTHALLVKNGLGSSLILRTSLIDMYFKCGKVKLAHRVFEEMEER--DVV 352
           F+G+SA+ QGLKTHALL+KNG   S ILRT LID YFKCGK+KLAHRVFEEM +R  D+V
Sbjct: 229 FSGASAFKQGLKTHALLIKNGFVDSSILRTCLIDFYFKCGKIKLAHRVFEEMPDRGIDIV 288

Query: 353 VWGAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAILTIILPVIGEVSARKVGQEVHAYV 532
           VWGAMIAGFAHNR QREAL+Y+RWM+ EG+ PNS I+T ILPVIGE  ARK+GQEVH YV
Sbjct: 289 VWGAMIAGFAHNRYQREALDYLRWMVSEGLYPNSVIVTTILPVIGEAWARKLGQEVHGYV 348

Query: 533 IKTKHYSKQLFIQSALVDMYCKCRDMGSGRMVFYGSMERNAISWTALLSGYVSNGRLEQA 712
           +KTK YS QL IQ+ L+DMYCKC DM SGR VFYGSMERNAISWTAL+SGYVSNGR EQA
Sbjct: 349 VKTKRYSNQLTIQTGLIDMYCKCGDMVSGRRVFYGSMERNAISWTALMSGYVSNGRPEQA 408

Query: 713 LRSIVWMQQEGLKPDV 760
           LRS+ WMQQEG +PDV
Sbjct: 409 LRSVAWMQQEGFRPDV 424



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 5/230 (2%)
 Frame = +2

Query: 95  REVLHTFSVMRELGVELNVYSFSCLIKSFAGSSAYHQGLKTHALLVKNGLGSSLILRTSL 274
           +E L     + + G+ +N  +FS LI +   S +     + HA +  NGL ++  LRT L
Sbjct: 97  KEALIIMDYLEQQGIPVNATTFSALIAACIRSKSLDHAKQIHAHIRINGLENNEFLRTKL 156

Query: 275 IDMYFKCGKVKLAHRVFEE-MEERDVVVWGAMIAG--FAHNRLQREALEYVRWMIKEGVD 445
           + +Y  CG  + A  VF E      V  W A++ G   +  +   + +     M + GV+
Sbjct: 157 VSLYTSCGSFEDAKMVFGECTSSTSVYPWNALLRGTVISGGKRYNDVVSAYGQMRELGVE 216

Query: 446 PNSAILTIILPVIGEVSARKVGQEVHAYVIKTKHYSKQLFIQSALVDMYCKCRDMGSGRM 625
            N    + ++      SA K G + HA +IK       + +++ L+D Y KC  +     
Sbjct: 217 LNVYSFSNVIKSFSGASAFKQGLKTHALLIKNGFVDSSI-LRTCLIDFYFKCGKIKLAHR 275

Query: 626 VFYGSMER--NAISWTALLSGYVSNGRLEQALRSIVWMQQEGLKPDVVTV 769
           VF    +R  + + W A+++G+  N    +AL  + WM  EGL P+ V V
Sbjct: 276 VFEEMPDRGIDIVVWGAMIAGFAHNRYQREALDYLRWMVSEGLYPNSVIV 325



 Score = 72.8 bits (177), Expect(2) = 8e-12
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
 Frame = +2

Query: 2   AKQVFDELPSRSVYPRNALLRGNVVLG---GRQHREVLHTFSVMRELGVELNVYSFSCLI 172
           A +VF+E+P R +   + ++ G ++ G    R  RE L     M   G+  N    + ++
Sbjct: 273 AHRVFEEMPDRGI---DIVVWGAMIAGFAHNRYQREALDYLRWMVSEGLYPNSVIVTTIL 329

Query: 173 KSFAGSSAYHQGLKTHALLVKNGLGSS-LILRTSLIDMYFKCGKVKLAHRVFEEMEERDV 349
                + A   G + H  +VK    S+ L ++T LIDMY KCG +    RVF    ER+ 
Sbjct: 330 PVIGEAWARKLGQEVHGYVVKTKRYSNQLTIQTGLIDMYCKCGDMVSGRRVFYGSMERNA 389

Query: 350 VVWGAMIAGFAHNRLQREALEYVRWMIKEGVDPNSAI 460
           + W A+++G+  N    +AL  V WM +EG  P+ ++
Sbjct: 390 ISWTALMSGYVSNGRPEQALRSVAWMQQEGFRPDVSL 426



 Score = 23.5 bits (49), Expect(2) = 8e-12
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 502 KSWPGGSCLCDQDEAL 549
           ++W G SCLC Q+  L
Sbjct: 440 EAWEGNSCLCCQEFVL 455