BLASTX nr result

ID: Panax21_contig00017505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017505
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604589.1| Aberrant root formation protein [Medicago tr...    56   1e-08
ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4...    53   3e-08
emb|CBI21098.3| unnamed protein product [Vitis vinifera]               53   3e-08
ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4...    51   5e-07
ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2...    48   2e-06

>ref|XP_003604589.1| Aberrant root formation protein [Medicago truncatula]
           gi|355505644|gb|AES86786.1| Aberrant root formation
           protein [Medicago truncatula]
          Length = 179

 Score = 56.2 bits (134), Expect(2) = 1e-08
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -3

Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163
           S LV+FL+++ D+  +DP NE  EN AFE LSEIH Y+ SPSLDQ
Sbjct: 45  SELVNFLDSLLDAAFSDPYNEHKENDAFEALSEIHRYICSPSLDQ 89



 Score = 27.7 bits (60), Expect(2) = 1e-08
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 61  MDTLSFELPKAVARFSSAS 5
           +D LSFE+PKAV++F+  S
Sbjct: 92  VDALSFEVPKAVSKFAGIS 110


>ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera]
          Length = 668

 Score = 52.8 bits (125), Expect(2) = 3e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163
           S LV++L++ISD+ ++D  NEE  N A E+LSEIH Y+  P LDQ
Sbjct: 44  SELVNYLDSISDAALSDTSNEESRNNALEVLSEIHLYICQPLLDQ 88



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 61  MDTLSFELPKAVARFSSAS 5
           +D LSFELPKAVA+F+  S
Sbjct: 91  VDALSFELPKAVAKFACVS 109


>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 52.8 bits (125), Expect(2) = 3e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163
           S LV++L++ISD+ ++D  NEE  N A E+LSEIH Y+  P LDQ
Sbjct: 44  SELVNYLDSISDAALSDTSNEESRNNALEVLSEIHLYICQPLLDQ 88



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 61  MDTLSFELPKAVARFSSAS 5
           +D LSFELPKAVA+F+  S
Sbjct: 91  VDALSFELPKAVAKFACVS 109


>ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4-like [Glycine max]
          Length = 730

 Score = 50.8 bits (120), Expect(2) = 5e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = -3

Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163
           S LV+FL+++ D+ ++D  +E  EN AFE +SEIH Y+ SPS+DQ
Sbjct: 44  SELVEFLDSLLDAAMSDLDSENAENDAFEAISEIHRYICSPSIDQ 88



 Score = 27.7 bits (60), Expect(2) = 5e-07
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 61  MDTLSFELPKAVARFSSAS 5
           +D LSFELPKAV++F   S
Sbjct: 91  VDALSFELPKAVSKFVGIS 109


>ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = -3

Query: 291 LVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163
           LVDF++++SDS V++ ++ + +  A E+LSE H +L SPSLDQ
Sbjct: 7   LVDFIDSVSDSAVSNHEDSDEQGNAVEVLSETHKFLLSPSLDQ 49



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -2

Query: 61  MDTLSFELPKAVARFSSAS 5
           +D LSFELPKAV++F+  S
Sbjct: 52  IDALSFELPKAVSKFAGLS 70


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