BLASTX nr result
ID: Panax21_contig00017505
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00017505 (434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003604589.1| Aberrant root formation protein [Medicago tr... 56 1e-08 ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4... 53 3e-08 emb|CBI21098.3| unnamed protein product [Vitis vinifera] 53 3e-08 ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4... 51 5e-07 ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2... 48 2e-06 >ref|XP_003604589.1| Aberrant root formation protein [Medicago truncatula] gi|355505644|gb|AES86786.1| Aberrant root formation protein [Medicago truncatula] Length = 179 Score = 56.2 bits (134), Expect(2) = 1e-08 Identities = 27/45 (60%), Positives = 34/45 (75%) Frame = -3 Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163 S LV+FL+++ D+ +DP NE EN AFE LSEIH Y+ SPSLDQ Sbjct: 45 SELVNFLDSLLDAAFSDPYNEHKENDAFEALSEIHRYICSPSLDQ 89 Score = 27.7 bits (60), Expect(2) = 1e-08 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -2 Query: 61 MDTLSFELPKAVARFSSAS 5 +D LSFE+PKAV++F+ S Sbjct: 92 VDALSFEVPKAVSKFAGIS 110 >ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera] Length = 668 Score = 52.8 bits (125), Expect(2) = 3e-08 Identities = 24/45 (53%), Positives = 33/45 (73%) Frame = -3 Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163 S LV++L++ISD+ ++D NEE N A E+LSEIH Y+ P LDQ Sbjct: 44 SELVNYLDSISDAALSDTSNEESRNNALEVLSEIHLYICQPLLDQ 88 Score = 30.0 bits (66), Expect(2) = 3e-08 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -2 Query: 61 MDTLSFELPKAVARFSSAS 5 +D LSFELPKAVA+F+ S Sbjct: 91 VDALSFELPKAVAKFACVS 109 >emb|CBI21098.3| unnamed protein product [Vitis vinifera] Length = 606 Score = 52.8 bits (125), Expect(2) = 3e-08 Identities = 24/45 (53%), Positives = 33/45 (73%) Frame = -3 Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163 S LV++L++ISD+ ++D NEE N A E+LSEIH Y+ P LDQ Sbjct: 44 SELVNYLDSISDAALSDTSNEESRNNALEVLSEIHLYICQPLLDQ 88 Score = 30.0 bits (66), Expect(2) = 3e-08 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -2 Query: 61 MDTLSFELPKAVARFSSAS 5 +D LSFELPKAVA+F+ S Sbjct: 91 VDALSFELPKAVAKFACVS 109 >ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4-like [Glycine max] Length = 730 Score = 50.8 bits (120), Expect(2) = 5e-07 Identities = 23/45 (51%), Positives = 34/45 (75%) Frame = -3 Query: 297 SVLVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163 S LV+FL+++ D+ ++D +E EN AFE +SEIH Y+ SPS+DQ Sbjct: 44 SELVEFLDSLLDAAMSDLDSENAENDAFEAISEIHRYICSPSIDQ 88 Score = 27.7 bits (60), Expect(2) = 5e-07 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 Query: 61 MDTLSFELPKAVARFSSAS 5 +D LSFELPKAV++F S Sbjct: 91 VDALSFELPKAVSKFVGIS 109 >ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1| predicted protein [Populus trichocarpa] Length = 568 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 21/43 (48%), Positives = 33/43 (76%) Frame = -3 Query: 291 LVDFLNTISDSIVTDPKNEEFENTAFEILSEIHTYLSSPSLDQ 163 LVDF++++SDS V++ ++ + + A E+LSE H +L SPSLDQ Sbjct: 7 LVDFIDSVSDSAVSNHEDSDEQGNAVEVLSETHKFLLSPSLDQ 49 Score = 28.9 bits (63), Expect(2) = 2e-06 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = -2 Query: 61 MDTLSFELPKAVARFSSAS 5 +D LSFELPKAV++F+ S Sbjct: 52 IDALSFELPKAVSKFAGLS 70