BLASTX nr result

ID: Panax21_contig00017504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017504
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306365.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]       105   4e-21
ref|XP_002532771.1| conserved hypothetical protein [Ricinus comm...   104   8e-21
emb|CBI21547.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulat...   103   1e-20

>ref|XP_002306365.1| predicted protein [Populus trichocarpa] gi|222855814|gb|EEE93361.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/56 (89%), Positives = 54/56 (96%)
 Frame = -1

Query: 433 DMVVSKAPVAKVDRPMGVVCFQIAKDSNDILNSWAMNLEKLLDLVEKSFHQIHKET 266
           DMVVSKA VAK+DRP+G+VCFQ+AKDSNDILNSWAMNLEKLLDLVEKS HQIHKET
Sbjct: 378 DMVVSKALVAKIDRPLGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKET 433


>gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]
          Length = 440

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/65 (80%), Positives = 57/65 (87%)
 Frame = -1

Query: 433 DMVVSKAPVAKVDRPMGVVCFQIAKDSNDILNSWAMNLEKLLDLVEKSFHQIHKETNGSQ 254
           DMVVSK+ VAK+DRPMG+VCFQ AKDSNDILNSWAMNLEKLLDLVEKS HQIHKET   +
Sbjct: 376 DMVVSKSLVAKIDRPMGIVCFQTAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHK 435

Query: 253 RYLEA 239
             L+A
Sbjct: 436 AVLKA 440


>ref|XP_002532771.1| conserved hypothetical protein [Ricinus communis]
           gi|223527481|gb|EEF29610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = -1

Query: 433 DMVVSKAPVAKVDRPMGVVCFQIAKDSNDILNSWAMNLEKLLDLVEKSFHQIHKET 266
           DMVVSKA VAK+DRPMG+VCFQ AKDSNDILNSWA+NLEKLLDLVEKS HQIHKET
Sbjct: 292 DMVVSKALVAKIDRPMGIVCFQAAKDSNDILNSWAVNLEKLLDLVEKSCHQIHKET 347


>emb|CBI21547.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = -1

Query: 433 DMVVSKAPVAKVDRPMGVVCFQIAKDSNDILNSWAMNLEKLLDLVEKSFHQIHKET 266
           DMVVSK+ VAK+DRPMGVVCFQ AKDSNDILNSW+MNLEKLLDLVEKS HQIHKET
Sbjct: 396 DMVVSKSLVAKIDRPMGVVCFQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKET 451


>ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
           [Vitis vinifera]
          Length = 442

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = -1

Query: 433 DMVVSKAPVAKVDRPMGVVCFQIAKDSNDILNSWAMNLEKLLDLVEKSFHQIHKET 266
           DMVVSK+ VAK+DRPMGVVCFQ AKDSNDILNSW+MNLEKLLDLVEKS HQIHKET
Sbjct: 378 DMVVSKSLVAKIDRPMGVVCFQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKET 433


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