BLASTX nr result

ID: Panax21_contig00017485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017485
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   251   4e-64
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   248   4e-63
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   243   8e-62
ref|XP_002514791.1| conserved hypothetical protein [Ricinus comm...   224   5e-56
ref|XP_004139660.1| PREDICTED: uncharacterized protein LOC101209...   223   9e-56

>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  251 bits (641), Expect = 4e-64
 Identities = 128/218 (58%), Positives = 155/218 (71%), Gaps = 5/218 (2%)
 Frame = -3

Query: 1290 DSVLSQSEFLTRREVLSRRSRQLKELAEVYKDHYWALMEEVKHQYREYCWEYGKSPFQED 1111
            D+VLS S +LTR+EV+ RRSR++K+LA+ Y+ HYW+LM+E+K +YREY W+YG+S FQED
Sbjct: 16   DAVLSSSRYLTRQEVIRRRSRRVKQLAKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 1110 EDRELNRIXXXXXXXXXXXXXXXXXXGSANW-----CGVQGCKMKAMALTEFCHLHILRD 946
            E RE   +                     N      C V GCK KAMALT FCH HIL D
Sbjct: 76   EKREGEGVEGTGENLNGHGKLGLGLGIGENGFDVKRCAVSGCKSKAMALTRFCHPHILSD 135

Query: 945  PKQTLYKGCNYVIKSSQAGPILCGKPILRSAVPSLCSPHFHKAEKHVARALKKAGLSANS 766
             KQ LYKGC++VIKS QAGP+LCGKPILRS VPSLC  HF KAE+ V  ALKKAGL+A S
Sbjct: 136  SKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNALKKAGLNAAS 195

Query: 765  TSKLAPKFHVIVAEYVNQIQAKRRVAKKETKACDEVKE 652
            +SKLAPKFHVIVAEYV+QIQ KRR A++ +    E+KE
Sbjct: 196  SSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVEIKE 233


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  248 bits (632), Expect = 4e-63
 Identities = 126/218 (57%), Positives = 156/218 (71%), Gaps = 5/218 (2%)
 Frame = -3

Query: 1320 TDSSQMEIDEDSVLSQSEFLTRREVLSRRSRQLKELAEVYKDHYWALMEEVKHQYREYCW 1141
            T S+ +++  D+VLS S +LTR+EV+ RRSR++K+L++ Y+ HYW+LM+E+K +YREY W
Sbjct: 7    TPSTAVDVS-DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYYW 65

Query: 1140 EYGKSPFQEDEDRELNRIXXXXXXXXXXXXXXXXXXGSANW-----CGVQGCKMKAMALT 976
            +YG+S FQEDE RE   +                     N      C V GCK KAMALT
Sbjct: 66   KYGRSAFQEDEKREGEGVEGTGENLNGHGKLGLGLGIGENGFDVKRCAVSGCKSKAMALT 125

Query: 975  EFCHLHILRDPKQTLYKGCNYVIKSSQAGPILCGKPILRSAVPSLCSPHFHKAEKHVARA 796
             FCH HIL D KQ LYKGC++VIKS QAGP+LCGKPILRS VPSLC  HF KAE+ V  A
Sbjct: 126  RFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNA 185

Query: 795  LKKAGLSANSTSKLAPKFHVIVAEYVNQIQAKRRVAKK 682
            LKKAGL+A S+SKLAPKFHVIVAEYV+QIQ KRR A++
Sbjct: 186  LKKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQR 223


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  243 bits (621), Expect = 8e-62
 Identities = 119/208 (57%), Positives = 149/208 (71%)
 Frame = -3

Query: 1293 EDSVLSQSEFLTRREVLSRRSRQLKELAEVYKDHYWALMEEVKHQYREYCWEYGKSPFQE 1114
            +D VLS++  +TR+E+L RRS +LK+L++ +KDHYWALMEE+K QYREY WEYG SPF+E
Sbjct: 40   KDQVLSRATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWEYGVSPFKE 99

Query: 1113 DEDRELNRIXXXXXXXXXXXXXXXXXXGSANWCGVQGCKMKAMALTEFCHLHILRDPKQT 934
            D    L +                    S + C   GCK+KAMALT FCHLHIL D KQ 
Sbjct: 100  DHQNTLQKQEQQKQGVIGENNTNVSDLKSNHRCLFVGCKLKAMALTSFCHLHILSDAKQK 159

Query: 933  LYKGCNYVIKSSQAGPILCGKPILRSAVPSLCSPHFHKAEKHVARALKKAGLSANSTSKL 754
            LYK C YVIKS+QAGPI CGKPILRS  PSLC+ H  KA+KHV +AL+KAGL+ +S+SKL
Sbjct: 160  LYKPCGYVIKSAQAGPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKL 219

Query: 753  APKFHVIVAEYVNQIQAKRRVAKKETKA 670
            APKFHVIV EYV QIQ +R+ A++  ++
Sbjct: 220  APKFHVIVTEYVRQIQFRRKAAERGNRS 247


>ref|XP_002514791.1| conserved hypothetical protein [Ricinus communis]
            gi|223545842|gb|EEF47345.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 245

 Score =  224 bits (571), Expect = 5e-56
 Identities = 114/221 (51%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
 Frame = -3

Query: 1290 DSVLSQSEFLTRREVLSRRSRQLKELAEVYKDHYWALMEEVKHQYREYCWEYGKSPFQED 1111
            D+ LS S  L+  E+++RRSR++K+LA++Y+ HYWALMEE+K +Y+EY W+YGKSPF+ED
Sbjct: 21   DAALSLSSHLSHEELMARRSRRVKQLAKIYRAHYWALMEELKSKYKEYYWKYGKSPFKED 80

Query: 1110 E--------DRELNRIXXXXXXXXXXXXXXXXXXGSANWCGVQGCKMKAMALTEFCHLHI 955
            +        D +                           C V GCK   MALT+FC  HI
Sbjct: 81   DKKRKRDLIDNKDTSFNGASELNGKLGFQEDGEDEGIRKCSVAGCKATPMALTKFCQPHI 140

Query: 954  LRDPKQTLYKGCNYVIKSSQAGPILCGKPILRSAVPSLCSPHFHKAEKHVARALKKAGLS 775
            L DPKQ LYKGC +VIKS+ A  +LCGKPILRS VP+LC  HF KAE + ARAL+KAGL+
Sbjct: 141  LLDPKQKLYKGCTFVIKSAPARHLLCGKPILRSTVPALCPTHFQKAEIYAARALRKAGLN 200

Query: 774  ANSTSKLAPKFHVIVAEYVNQIQAKRRVAKKETKACDEVKE 652
             +S SK+APKFHVIV E+V QIQ KRR A KE  A  +  E
Sbjct: 201  VSSPSKVAPKFHVIVREFVRQIQTKRRAAHKENAAKVQTNE 241


>ref|XP_004139660.1| PREDICTED: uncharacterized protein LOC101209765 [Cucumis sativus]
            gi|449527331|ref|XP_004170665.1| PREDICTED:
            uncharacterized protein LOC101225651 [Cucumis sativus]
          Length = 241

 Score =  223 bits (569), Expect = 9e-56
 Identities = 112/210 (53%), Positives = 140/210 (66%), Gaps = 3/210 (1%)
 Frame = -3

Query: 1296 DEDSVLSQSEFLTRREVLSRRSRQLKELAEVYKDHYWALMEEVKHQYREYCWEYGKSPFQ 1117
            D D  L+ S   +RREVL RRSR+ K+L  ++K+ YW L+EE+K +YREY W YGKSPF+
Sbjct: 26   DRDRALATSMICSRREVLERRSRRAKQLCRIFKELYWFLLEELKRKYREYYWTYGKSPFK 85

Query: 1116 EDEDRELNRIXXXXXXXXXXXXXXXXXXGSANW---CGVQGCKMKAMALTEFCHLHILRD 946
            EDE +E   I                    ++    C V GCK KAMALT++CH HIL D
Sbjct: 86   EDE-KEAEGIGDYPEGIGENGKLGLASATGSDEIRRCDVTGCKAKAMALTKYCHAHILSD 144

Query: 945  PKQTLYKGCNYVIKSSQAGPILCGKPILRSAVPSLCSPHFHKAEKHVARALKKAGLSANS 766
             KQ LYKGC +VIKS Q+GP+LC KP+LRS VP  CS H  K EK +AR L+KAGL+ +S
Sbjct: 145  KKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCSGHLQKGEKCLARDLRKAGLNVSS 204

Query: 765  TSKLAPKFHVIVAEYVNQIQAKRRVAKKET 676
            TSKL P FHV++AEYV QIQ+KRR  K+ T
Sbjct: 205  TSKLRPDFHVLIAEYVRQIQSKRRATKRAT 234


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