BLASTX nr result

ID: Panax21_contig00017481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017481
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    70   2e-10
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    58   8e-07

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
 Frame = +2

Query: 11   PAGYDCVSTPPHISTFTIPSLPN--IRGLNVCVVYRG----WWFYSFRPAIKMHNETKNF 172
            P  +D  ST   +S FTI  L +  IRGLN+C VY      +W ++     +M+NETK  
Sbjct: 904  PHWFDHKSTGSSLS-FTINPLSDYKIRGLNLCTVYARDHEVYWLHAAGHYARMNNETKGT 962

Query: 173  CWEYSPNFRKPDKKEEEEYFMMLSHWKSGNALEGGDRVTVSLI----YYETLDRLVVEKI 340
             W YSP F    + ++E+  + LS+WK G   E GD+V VS+     YY       V++ 
Sbjct: 963  NWSYSPTFYALPEDDDED-MLWLSYWKFGGEFEVGDKVNVSVRMPFGYY-------VKEC 1014

Query: 341  GIKVVYDDDD 370
            GI++VY++++
Sbjct: 1015 GIRIVYEENE 1024


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
 Frame = +2

Query: 11   PAGYDCVSTPPHISTFTIPS--LPNIRGLNVCVVY------RGWWFYSFRPAIKMHNETK 166
            P  Y   +  P IS FT+P   +  + GLN+C+VY       G   + +   IK+ N+TK
Sbjct: 982  PGWYSPQNEGPLIS-FTMPPSHVRKVCGLNICIVYTCNDVRNGLTDHHY---IKIWNKTK 1037

Query: 167  NFCWEYSPNFRKPDKKEEEEYFMMLSHWKSGNALEGGDRVTVSLIYYETLDRLVVEKIGI 346
            +  W YSP F      E E+  + LSHWK  + LEGGD++ VS +          + I I
Sbjct: 1038 DLKWTYSPIFY--GIPEPEKSMLWLSHWKLEDLLEGGDQLNVSAVMSTGYQ---AKNIRI 1092

Query: 347  KVVYDDDD 370
             +VYD ++
Sbjct: 1093 HLVYDQEN 1100


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