BLASTX nr result

ID: Panax21_contig00017472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017472
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus c...    87   5e-15
gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bol...    87   8e-15
ref|XP_003634500.1| PREDICTED: uncharacterized protein LOC100853...    84   7e-14
ref|XP_003557039.1| PREDICTED: uncharacterized protein LOC100778...    83   1e-13
ref|XP_002276460.1| PREDICTED: uncharacterized protein LOC100245...    82   3e-13

>ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus communis]
           gi|223533034|gb|EEF34796.1| hypothetical protein
           RCOM_1568080 [Ricinus communis]
          Length = 136

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
 Frame = +3

Query: 375 TFQDNIDTETYLRWERKMEREFDCHDYSERRKVRRAIQEFSDHTIIW*QLI---KQKHGE 545
           +FQ   D + YL WERK+E  F+CH+YSE +KV+ A  EFSD+ I+W       ++++GE
Sbjct: 22  SFQGRNDPDVYLEWERKVELIFECHNYSEEKKVKLAAVEFSDYAIVWWDQFCKERRRYGE 81

Query: 546 RPFETWTELKTAMRKRFAP 602
           RP E+W E+K  MRKRF P
Sbjct: 82  RPVESWIEMKQIMRKRFIP 100


>gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 180

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 375 TFQDNIDTETYLRWERKMEREFDCHDYSERRKVRRAIQEFSDHTIIW*QLI---KQKHGE 545
           TFQ   D E YL WE+K++  FDCH YSE++KV+  I EF+++ +IW   I   ++++GE
Sbjct: 14  TFQGKNDPEAYLEWEKKVDWIFDCHSYSEQKKVKLVIIEFTEYALIWWDQIVISRRRNGE 73

Query: 546 RPFETWTELKTAMRKRFAP 602
           RP +TW E+K  MR+RF P
Sbjct: 74  RPVQTWGEMKVLMRRRFVP 92


>ref|XP_003634500.1| PREDICTED: uncharacterized protein LOC100853746 [Vitis vinifera]
          Length = 165

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 39/77 (50%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
 Frame = +3

Query: 375 TFQDNIDTETYLRWERKMEREFDCHDYSERRKVRRAIQEFSDHTII-W*QLI--KQKHGE 545
           +FQ   D E YL+WE+K+E  F+CH+YSE +KV+ A+ EF+D+ II W QL+  ++++ E
Sbjct: 5   SFQGKNDQEVYLKWEKKVEFIFECHNYSEEKKVKVAMIEFTDYAIIWWDQLVMNRRRNYE 64

Query: 546 RPFETWTELKTAMRKRF 596
           RP ETW E+K  MR+RF
Sbjct: 65  RPIETWEEMKATMRRRF 81


>ref|XP_003557039.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
           max]
          Length = 692

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
 Frame = +3

Query: 378 FQDNIDTETYLRWERKMEREFDCHDYSERRKVRRAIQEFSDHTIIW*QLIKQ---KHGER 548
           F+   D + YL WE K E  F C+DY++ +KV+ AI EFSD+ ++W    ++   +   R
Sbjct: 87  FKGRSDPDAYLDWEMKTEHVFACNDYTDAQKVKLAIAEFSDYALVWWHKYQREMLREERR 146

Query: 549 PFETWTELKTAMRKRFAPVQRDRREEYTSKKFVEQPSRRSTLED-----DMRVHRHVNKE 713
             +TWTE+K  MRKR+ P   +R      +K  E      T+E+     +M + R   +E
Sbjct: 147 EVDTWTEMKRVMRKRYVPTSYNRT---MRQKLQELSQGNLTVEEYYKEMEMALVRANIEE 203

Query: 714 DSHWRQPQDTLKASKNLREDINESFKEVEEIIEYAVQGELL 836
           DS     +DT+    N    +N + ++V E+ EY V  +LL
Sbjct: 204 DS-----EDTMARFLN---GLNPAIRDVVELQEYVVLDDLL 236


>ref|XP_002276460.1| PREDICTED: uncharacterized protein LOC100245366 [Vitis vinifera]
          Length = 162

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
 Frame = +3

Query: 375 TFQDNIDTETYLRWERKMEREFDCHDYSERRKVRRAIQEFSDHTII-W*QLI--KQKHGE 545
           +FQ   D E YL WE+K+E  F+CH+YSE +KV+  + EF+D++II W QL+  ++++ E
Sbjct: 5   SFQGKNDPEVYLEWEKKVEFIFECHNYSEEKKVKLVVIEFTDYSIIWWDQLVMKRRRNYE 64

Query: 546 RPFETWTELKTAMRKRFAP 602
           RP + W E+K  M+KRF P
Sbjct: 65  RPIKIWEEMKATMKKRFVP 83


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