BLASTX nr result

ID: Panax21_contig00017464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017464
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31844.3| unnamed protein product [Vitis vinifera]              329   6e-88
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...   329   6e-88
ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   314   2e-83
ref|XP_002510844.1| conserved hypothetical protein [Ricinus comm...   313   3e-83
ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82

>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  329 bits (843), Expect = 6e-88
 Identities = 171/249 (68%), Positives = 195/249 (78%)
 Frame = +2

Query: 5   AGIMYTSNDDDLGPQIKSNMFSLTGTGFFGAVGRSINLGGRTXXXXXXXXXXXXXXXXXX 184
           AGIMYTSN  +L  Q++S+MFSL+GTGFFGA+GRSINLGG+T                  
Sbjct: 133 AGIMYTSNHGELNQQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSD 192

Query: 185 XNRPFGDEFRAARKTAEEVGAQIVLGDRPIEITLERAWSSLKLREKLSLVVSVVRGITSA 364
            NRPFGDEFRAARK +E+VGAQIVLGDRPIEITLERAW+SL+  EKLSLV+SV+RGITS+
Sbjct: 193 VNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLSLVISVIRGITSS 252

Query: 365 TGLSRNTLKESSNDNSNFQLYEXXXXXXXXXXXXXIHERDTYIAWSLKRSKAVNSSKRVV 544
             LS N +KE S D+S FQLY+             IHERDTY+AWSLKRSKAVN  KRVV
Sbjct: 253 E-LSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVV 311

Query: 545 GVIGKGHMNGVIYALVSDSGDLRFRDLVGQRSTGNDSVGWVDSLLKNLVRDTVIGILLWA 724
           GVIGKGHMNGVIYALVSD G+LRFRDLVG+RS+G+ + GWVDSLLKNLVRDTVIGILLWA
Sbjct: 312 GVIGKGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDSLLKNLVRDTVIGILLWA 371

Query: 725 LFEQMNNGL 751
           LFEQ+   L
Sbjct: 372 LFEQIKTVL 380


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score =  329 bits (843), Expect = 6e-88
 Identities = 171/249 (68%), Positives = 195/249 (78%)
 Frame = +2

Query: 5   AGIMYTSNDDDLGPQIKSNMFSLTGTGFFGAVGRSINLGGRTXXXXXXXXXXXXXXXXXX 184
           AGIMYTSN  +L  Q++S+MFSL+GTGFFGA+GRSINLGG+T                  
Sbjct: 138 AGIMYTSNHGELNQQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSD 197

Query: 185 XNRPFGDEFRAARKTAEEVGAQIVLGDRPIEITLERAWSSLKLREKLSLVVSVVRGITSA 364
            NRPFGDEFRAARK +E+VGAQIVLGDRPIEITLERAW+SL+  EKLSLV+SV+RGITS+
Sbjct: 198 VNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLSLVISVIRGITSS 257

Query: 365 TGLSRNTLKESSNDNSNFQLYEXXXXXXXXXXXXXIHERDTYIAWSLKRSKAVNSSKRVV 544
             LS N +KE S D+S FQLY+             IHERDTY+AWSLKRSKAVN  KRVV
Sbjct: 258 E-LSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVV 316

Query: 545 GVIGKGHMNGVIYALVSDSGDLRFRDLVGQRSTGNDSVGWVDSLLKNLVRDTVIGILLWA 724
           GVIGKGHMNGVIYALVSD G+LRFRDLVG+RS+G+ + GWVDSLLKNLVRDTVIGILLWA
Sbjct: 317 GVIGKGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDSLLKNLVRDTVIGILLWA 376

Query: 725 LFEQMNNGL 751
           LFEQ+   L
Sbjct: 377 LFEQIKTVL 385


>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  314 bits (805), Expect = 2e-83
 Identities = 161/252 (63%), Positives = 194/252 (76%), Gaps = 3/252 (1%)
 Frame = +2

Query: 2   RAGIMYTSNDDDLGPQIKSNMFSLTGTGFFGAVGRSINLGGRTXXXXXXXXXXXXXXXXX 181
           RAGIMY + +D+LG Q++SNMFSL+GTGFFGAVGRSINLGG+T                 
Sbjct: 119 RAGIMYATANDELGKQLRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLATFSSKISS 178

Query: 182 XXNRPFGDEFRAARKTAEEVGAQIVLGDRPIEITLERAWSSLKLREKLSLVVSVVRGITS 361
             NRPFGDEFRAARK +EE+GAQIVLGDRPIEITL+RAW ++K  +KLSLV+S++RGI S
Sbjct: 179 DINRPFGDEFRAARKASEEIGAQIVLGDRPIEITLQRAWKAMKWTQKLSLVLSIIRGIAS 238

Query: 362 ATGLSRNTLK--ESSNDNSNFQLYEXXXXXXXXXXXXXIHERDTYIAWSLKRSKAVNSSK 535
           ++  S N LK  E+S+D+  FQLYE             IHERDTY+AWSLKRSKAVN+SK
Sbjct: 239 SSNSSINKLKLQEASSDDGTFQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSK 298

Query: 536 RVVGVIGKGHMNGVIYALVSDSGDLRFRDLVGQRS-TGNDSVGWVDSLLKNLVRDTVIGI 712
            VVGVIGKGHMNGVIYAL+SD+G+LRFRDLVG+ S  G  S GW+D L+K+LVRDT+IGI
Sbjct: 299 NVVGVIGKGHMNGVIYALLSDTGNLRFRDLVGKNSYDGGGSNGWIDDLIKSLVRDTIIGI 358

Query: 713 LLWALFEQMNNG 748
           LLWAL+E +N G
Sbjct: 359 LLWALYEFINGG 370


>ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
           gi|223549959|gb|EEF51446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 390

 Score =  313 bits (803), Expect = 3e-83
 Identities = 162/250 (64%), Positives = 188/250 (75%)
 Frame = +2

Query: 2   RAGIMYTSNDDDLGPQIKSNMFSLTGTGFFGAVGRSINLGGRTXXXXXXXXXXXXXXXXX 181
           +AGIMYTSN+ +   Q++SNMFSL+G GFFGAVGRSINLGG+T                 
Sbjct: 141 KAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINLGGQTALALRLLLALFSSKISN 200

Query: 182 XXNRPFGDEFRAARKTAEEVGAQIVLGDRPIEITLERAWSSLKLREKLSLVVSVVRGITS 361
             NRPFGDEFRAARK +EE+GAQIVLGDRPIEITLERAW++LK +EKLSLV SVVRGITS
Sbjct: 201 DVNRPFGDEFRAARKVSEEIGAQIVLGDRPIEITLERAWNALKWKEKLSLVSSVVRGITS 260

Query: 362 ATGLSRNTLKESSNDNSNFQLYEXXXXXXXXXXXXXIHERDTYIAWSLKRSKAVNSSKRV 541
           ++  S+   K    D+  F LYE             IHERDTY+AWSLKRSKAVN+SKRV
Sbjct: 261 SSHTSKKDFKVPDTDDDTFLLYEKLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKRV 320

Query: 542 VGVIGKGHMNGVIYALVSDSGDLRFRDLVGQRSTGNDSVGWVDSLLKNLVRDTVIGILLW 721
           VGVIGKGHMNGVIYALVSD G+LRFRDLVGQR +G+ S G VD LLK+LVRDTVIG++LW
Sbjct: 321 VGVIGKGHMNGVIYALVSDLGNLRFRDLVGQRQSGSGSKGIVDELLKSLVRDTVIGVVLW 380

Query: 722 ALFEQMNNGL 751
            L+EQ+   L
Sbjct: 381 VLYEQIKGAL 390


>ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|222858926|gb|EEE96473.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  311 bits (797), Expect = 1e-82
 Identities = 160/247 (64%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
 Frame = +2

Query: 14  MYTSNDDDLGPQIKSNMFSLTGTGFFGAVGRSINLGGRTXXXXXXXXXXXXXXXXXXXNR 193
           MY S++ ++G Q++S+MFSL+GTGFFGAVGRSINLGG+T                   NR
Sbjct: 1   MYISDEGEVGQQLRSSMFSLSGTGFFGAVGRSINLGGQTALALRLLLALFSSKISSDVNR 60

Query: 194 PFGDEFRAARKTAEEVGAQIVLGDRPIEITLERAWSSLKLREKLSLVVSVVRGITSATGL 373
           PFGDEFRAARK AEE+GAQIVLGDRPIEITLERAW+SLK REKLSLV++VVRGITS++ +
Sbjct: 61  PFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKWREKLSLVIAVVRGITSSSDI 120

Query: 374 SRNTLKESSNDNSNFQLYEXXXXXXXXXXXXXIHERDTYIAWSLKRSKAVNSSKRVVGVI 553
           S+N  K SS D+  FQLYE             IHERDTY+AWSLKRSKAVN+ KRVVGVI
Sbjct: 121 SKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNNGKRVVGVI 180

Query: 554 GKGHMNGVIYALVSDSGDLRFRDLVGQRSTGND-SVGWVDSLLKNLVRDTVIGILLWALF 730
           GKGHMNGVIYAL+SD G+LRFRDL G+RS+G+D S G+V  L+K+LV DT IGILLW L+
Sbjct: 181 GKGHMNGVIYALISDQGNLRFRDLAGRRSSGDDGSNGFVAGLVKSLVIDTAIGILLWQLY 240

Query: 731 EQMNNGL 751
           EQ+   L
Sbjct: 241 EQLKGSL 247


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