BLASTX nr result

ID: Panax21_contig00017460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017460
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890066.1| predicted protein [Arabidopsis lyrata subsp....   119   3e-25
ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813...   114   8e-24
ref|NP_001236045.1| uncharacterized protein LOC100305995 [Glycin...   114   8e-24
ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242...   114   1e-23

>ref|XP_002890066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335908|gb|EFH66325.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 151

 Score =  119 bits (297), Expect = 3e-25
 Identities = 71/135 (52%), Positives = 84/135 (62%), Gaps = 5/135 (3%)
 Frame = -3

Query: 392 GYLQDALFEFSSK-RRRLLLFS--DDQTNYSTCPIESCW--KENFTDTYPENFGYLNQIN 228
           GYL+DAL EFS + +RR L F+  +D+ NY     ++ W   EN++ T  + F   N  +
Sbjct: 9   GYLEDALIEFSGRGKRRRLSFNGAEDKPNYDIDHSQNHWGLSENYSCTSSQ-FAEKNDYD 67

Query: 227 EMDCIAAGAGEXXXXKVITRVVYPFAVVKPGGIEGDVTLNDINERILMPPTRPVRHPVGD 48
           E                  RVVYPF VVKPGG E DVTLNDIN+RILMPP RPVRHPVGD
Sbjct: 68  EKK----------------RVVYPFGVVKPGGREEDVTLNDINKRILMPPARPVRHPVGD 111

Query: 47  FACRPLVSPHGPGLS 3
           FACRP VS  GPGLS
Sbjct: 112 FACRPCVSADGPGLS 126


>ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|222863791|gb|EEF00922.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  118 bits (295), Expect = 6e-25
 Identities = 86/202 (42%), Positives = 98/202 (48%), Gaps = 72/202 (35%)
 Frame = -3

Query: 392 GYLQDALFEFS--SKRRRLLLFSD------DQTNYSTCPIESCWK-----------ENFT 270
           GYL+DAL EF+  SKRRRLLLFS       DQ   S    ES W            ENF+
Sbjct: 51  GYLEDALLEFNERSKRRRLLLFSTEHDHAHDQYEKSNDLPESNWNEENFDDWELMSENFS 110

Query: 269 D---------------------------------------TYPENFGY-----------L 240
                                                   + PE   Y            
Sbjct: 111 CLSHITGIRGTSDEPMTTSMSNTSEEANVISEIKTPEEGISAPETLDYSSSSSYKDLAGT 170

Query: 239 NQINEMDCIAAGA---GEXXXXKVITRVVYPFAVVKPGGIEGDVTLNDINERILMPPTRP 69
           N I E D I   +   GE    ++ TRVVYPFA+VKPGG+EGD+T+NDINERILMPPTRP
Sbjct: 171 NSIFEKDNIPHSSDDDGEKRKRRLGTRVVYPFALVKPGGLEGDMTINDINERILMPPTRP 230

Query: 68  VRHPVGDFACRPLVSPHGPGLS 3
           VRHPVGDFAC+P VS  GPGLS
Sbjct: 231 VRHPVGDFACKPCVSADGPGLS 252


>ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813284 [Glycine max]
          Length = 275

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/59 (89%), Positives = 55/59 (93%)
 Frame = -3

Query: 179 VITRVVYPFAVVKPGGIEGDVTLNDINERILMPPTRPVRHPVGDFACRPLVSPHGPGLS 3
           V+TRVVYPFA+VKPGG EGDVTLNDINERILMPPTRPVRHPVGDFACRP VS  GPGLS
Sbjct: 192 VVTRVVYPFAMVKPGGREGDVTLNDINERILMPPTRPVRHPVGDFACRPCVSAEGPGLS 250


>ref|NP_001236045.1| uncharacterized protein LOC100305995 [Glycine max]
           gi|255627219|gb|ACU13954.1| unknown [Glycine max]
          Length = 240

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/59 (89%), Positives = 55/59 (93%)
 Frame = -3

Query: 179 VITRVVYPFAVVKPGGIEGDVTLNDINERILMPPTRPVRHPVGDFACRPLVSPHGPGLS 3
           V+TRVVYPFA+VKPGG EGDVTLNDINERILMPPTRPVRHPVGDFACRP VS  GPGLS
Sbjct: 153 VVTRVVYPFAMVKPGGREGDVTLNDINERILMPPTRPVRHPVGDFACRPCVSAEGPGLS 211


>ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242197 [Vitis vinifera]
           gi|297737557|emb|CBI26758.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/70 (77%), Positives = 59/70 (84%)
 Frame = -3

Query: 212 AAGAGEXXXXKVITRVVYPFAVVKPGGIEGDVTLNDINERILMPPTRPVRHPVGDFACRP 33
           + G       K+ITRVVYPFAVVKPGG++GD+TLNDINERILMPPTRPVRHPVGDFA RP
Sbjct: 189 STGGDHKKKKKLITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRP 248

Query: 32  LVSPHGPGLS 3
            VSP GPGLS
Sbjct: 249 FVSPDGPGLS 258


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