BLASTX nr result

ID: Panax21_contig00017447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017447
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...    68   7e-10
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...    56   4e-06
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...    56   4e-06

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = -3

Query: 363 ESVKNKKNGILDTKDSVKAEPVRAETSEATKVQRVNSMKVEKVSKVETMKLEKSNSSSAL 184
           +  +NKKNG LD   S KAE  + ET +     +   +KVEK SKVET+K+EK +  S+ 
Sbjct: 88  DETRNKKNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFDRGSST 147

Query: 183 KSEKVVKSETFSNAKKAEHVDAIK 112
           K   V +SET    K+ E+VD  K
Sbjct: 148 KPGSVSRSETIKVEKRVENVDERK 171


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/71 (40%), Positives = 48/71 (67%)
 Frame = -3

Query: 348 KKNGILDTKDSVKAEPVRAETSEATKVQRVNSMKVEKVSKVETMKLEKSNSSSALKSEKV 169
           KKNG +D+K SVKAE  ++ET +  K+++ + +KVE+ S  ET+K+EK +    +K EK+
Sbjct: 92  KKNGSIDSKSSVKAEVSKSETVKVEKLRKTSVVKVERASTSETVKVEKMDQDKTVKVEKM 151

Query: 168 VKSETFSNAKK 136
            K E  +++ K
Sbjct: 152 SKQEIQTSSVK 162


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -3

Query: 366 EESVKNKKNGILDTKDSVKAEPVRAETSEATKVQRVNSMKVEKVSKVETMKLEKSNSSSA 187
           +E+ KNKKNG   +KDS K     AE+ +  K Q+ +SMKVE+VSKVE  + +++ ++S+
Sbjct: 8   KETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVSKVE--QFDRNGATSS 65

Query: 186 LKSEKVVKSETFSNAKKAEHVDA-IKMEK 103
           +K  K     +  N+ K E  D+ +K+E+
Sbjct: 66  VKYSKSESVVSERNSVKVEKTDSMVKVER 94


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
           [Cucumis sativus]
          Length = 369

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -3

Query: 366 EESVKNKKNGILDTKDSVKAEPVRAETSEATKVQRVNSMKVEKVSKVETMKLEKSNSSSA 187
           +E+ KNKKNG   +KDS K     AE+ +  K Q+ +SMKVE+VSKVE  + +++ ++S+
Sbjct: 87  KETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVSKVE--QFDRNGATSS 144

Query: 186 LKSEKVVKSETFSNAKKAEHVDA-IKMEK 103
           +K  K     +  N+ K E  D+ +K+E+
Sbjct: 145 VKYSKSESVVSERNSVKVEKTDSMVKVER 173


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