BLASTX nr result

ID: Panax21_contig00017443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017443
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   338   1e-90
gb|AAT40482.1| hypothetical protein [Solanum demissum]                338   1e-90
gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   334   2e-89
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   320   5e-85
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   317   3e-84

>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
            gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
            isoform 2 [Vitis vinifera]
            gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
            [Vitis vinifera]
          Length = 246

 Score =  338 bits (868), Expect = 1e-90
 Identities = 180/269 (66%), Positives = 204/269 (75%), Gaps = 1/269 (0%)
 Frame = -2

Query: 1109 MDPGGYTVEVTSLSPEATEKDVHDFFAFCGKIEHVEIVXXXXXXXXXXXXXXXXXXEHVE 930
            M   G+T+EVTSLSP+ TEKDV+DFFAF G IE VE+V                      
Sbjct: 1    MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRS-------------------- 40

Query: 929  IVRAGEIASTAYVTFKYAHALETAVLLNGATILDRPVCVTHWGHSEDEFNIWNRSSWKLE 750
               A E A TAYVTFK A+A+ETAVLL+GATI+D+ VC+T WGH EDEF++WNR +WKLE
Sbjct: 41   ---ADECACTAYVTFKDAYAVETAVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLE 97

Query: 749  DETGST-ASEGNQFVPSAGEAVTMAQDVFKSMLAKGYILGKDALSKAKAFDESHQVSATA 573
            DET ST A E N+  P AGEAVTMAQ+V K+MLAKGYILGKDALSKAK FDESHQ SATA
Sbjct: 98   DETSSTHAPETNRSYPDAGEAVTMAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATA 157

Query: 572  TAKVAEMSERIGLTDKICAGVGAVKSVDERYHILDTTKSAVAVTGRTALAAANTVVNSSY 393
             A VAE+S+RIGLTDK CAGV A KSVD+RYHI + TKSAV+ TGRTA AAA TVVNSSY
Sbjct: 158  VATVAELSQRIGLTDKFCAGVEAAKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSY 217

Query: 392  FSKGALWMSDALSRAAKVAADLGSRDASK 306
            FSKGALW+SDALSRAAK A DLGS   +K
Sbjct: 218  FSKGALWVSDALSRAAKAAGDLGSHGVNK 246


>gb|AAT40482.1| hypothetical protein [Solanum demissum]
          Length = 244

 Score =  338 bits (868), Expect = 1e-90
 Identities = 173/268 (64%), Positives = 205/268 (76%)
 Frame = -2

Query: 1109 MDPGGYTVEVTSLSPEATEKDVHDFFAFCGKIEHVEIVXXXXXXXXXXXXXXXXXXEHVE 930
            M+PGGYT EVT LSP ATEKDV +FF FCG IEHVEI                       
Sbjct: 1    MNPGGYTAEVTGLSPAATEKDVQEFFGFCGAIEHVEI----------------------- 37

Query: 929  IVRAGEIASTAYVTFKYAHALETAVLLNGATILDRPVCVTHWGHSEDEFNIWNRSSWKLE 750
             VRAGE ASTAYVTF+  HALETAVLL+GA ILD+ VC+T WGH +DEF+ WN SSWK +
Sbjct: 38   -VRAGEHASTAYVTFRNPHALETAVLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQ 96

Query: 749  DETGSTASEGNQFVPSAGEAVTMAQDVFKSMLAKGYILGKDALSKAKAFDESHQVSATAT 570
            ++  S+ S+G+ FV SAGEAVT+ QDV K+ML++GY+LGK AL KAKAFDESH +SATA 
Sbjct: 97   EDCHSSDSQGHYFVSSAGEAVTLTQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAV 156

Query: 569  AKVAEMSERIGLTDKICAGVGAVKSVDERYHILDTTKSAVAVTGRTALAAANTVVNSSYF 390
            +KVA++SERIGLTDK CAGV   +SVD+RYHI DTT+SAV+ TGRTA++AA  VVNSSYF
Sbjct: 157  SKVADLSERIGLTDKFCAGVEVARSVDQRYHISDTTRSAVSATGRTAISAATAVVNSSYF 216

Query: 389  SKGALWMSDALSRAAKVAADLGSRDASK 306
            SKGALWMS ALS+AA+ AADLGSR  +K
Sbjct: 217  SKGALWMSGALSKAAQAAADLGSRGINK 244


>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  334 bits (857), Expect = 2e-89
 Identities = 175/269 (65%), Positives = 203/269 (75%), Gaps = 1/269 (0%)
 Frame = -2

Query: 1109 MDPGGYTVEVTSLSPEATEKDVHDFFAFCGKIEHVEIVXXXXXXXXXXXXXXXXXXEHVE 930
            M+PGGYT EVT LSP ATEKDV +FF FCG IEHVEI                       
Sbjct: 1    MNPGGYTAEVTGLSPTATEKDVQEFFGFCGAIEHVEI----------------------- 37

Query: 929  IVRAGEIASTAYVTFKYAHALETAVLLNGATILDRPVCVTHWGHSEDEFNIWNRSSWK-L 753
             VRAGE ASTAYVTF+  HALETAVLL+GA ILD+ VC+T WGH +DEF+ WN SSWK  
Sbjct: 38   -VRAGEHASTAYVTFRNPHALETAVLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQ 96

Query: 752  EDETGSTASEGNQFVPSAGEAVTMAQDVFKSMLAKGYILGKDALSKAKAFDESHQVSATA 573
            ED   S  S+G+ FV SAGEAVT+ QDV K+ML++GY+LGK AL KAKAFDESH +SATA
Sbjct: 97   EDCYSSQDSQGHYFVSSAGEAVTLTQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATA 156

Query: 572  TAKVAEMSERIGLTDKICAGVGAVKSVDERYHILDTTKSAVAVTGRTALAAANTVVNSSY 393
             +KVA++SERIGLTDK CAGV   +SVD+RYHI DTT+SAV+ TGRTA++AA  VVNSSY
Sbjct: 157  VSKVADLSERIGLTDKFCAGVEVARSVDQRYHISDTTRSAVSATGRTAISAATAVVNSSY 216

Query: 392  FSKGALWMSDALSRAAKVAADLGSRDASK 306
            FSKGALWMS ALS+AA+ AADLGSR  +K
Sbjct: 217  FSKGALWMSGALSKAAQAAADLGSRGINK 245


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  320 bits (819), Expect = 5e-85
 Identities = 163/263 (61%), Positives = 204/263 (77%)
 Frame = -2

Query: 1109 MDPGGYTVEVTSLSPEATEKDVHDFFAFCGKIEHVEIVXXXXXXXXXXXXXXXXXXEHVE 930
            M+ GGY VEVT LSP+AT+KDV DFFAF G IE+VEI+                      
Sbjct: 1    MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEII---------------------- 38

Query: 929  IVRAGEIASTAYVTFKYAHALETAVLLNGATILDRPVCVTHWGHSEDEFNIWNRSSWKLE 750
              R+G+ A TAYVTFK A+A ETA LL+GATILD+ VC+T WGH EDEF+ WN+ S+  E
Sbjct: 39   --RSGDYACTAYVTFKDAYAQETACLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHE 96

Query: 749  DETGSTASEGNQFVPSAGEAVTMAQDVFKSMLAKGYILGKDALSKAKAFDESHQVSATAT 570
            DET ST  + NQFV SAGEAVTMAQ+V ++ML+KGY+L KDAL+KAK FDESHQVSATAT
Sbjct: 97   DETASTTPQSNQFVSSAGEAVTMAQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATAT 156

Query: 569  AKVAEMSERIGLTDKICAGVGAVKSVDERYHILDTTKSAVAVTGRTALAAANTVVNSSYF 390
            AKV+E+S+RIGL+DKI AG+GAVKSVD+RY++ +TT +A +  GR+  AAAN++VNSSYF
Sbjct: 157  AKVSELSQRIGLSDKISAGIGAVKSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYF 216

Query: 389  SKGALWMSDALSRAAKVAADLGS 321
            SKGALW+S AL+RAA+VA+D+G+
Sbjct: 217  SKGALWVSGALTRAAQVASDMGT 239


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540601|gb|EEF42164.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 245

 Score =  317 bits (813), Expect = 3e-84
 Identities = 167/265 (63%), Positives = 201/265 (75%), Gaps = 1/265 (0%)
 Frame = -2

Query: 1109 MDPGGYTVEVTSLSPEATEKDVHDFFAFCGKIEHVEIVXXXXXXXXXXXXXXXXXXEHVE 930
            MD  G+ VEVT LSP  TEKD++DFF+F G IEHVEI                       
Sbjct: 1    MDQDGHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEI----------------------- 37

Query: 929  IVRAGEIASTAYVTFKYAHALETAVLLNGATILDRPVCVTHWGHSEDEFNIWNRSSWKLE 750
             VR G+ A TAYVTFK A++ ETAVLL+GATIL+  VC+T WGH  DEF++WN  S ++E
Sbjct: 38   -VRCGDYACTAYVTFKNAYSQETAVLLSGATILEERVCITRWGHYIDEFDLWNTPSLRVE 96

Query: 749  DETGST-ASEGNQFVPSAGEAVTMAQDVFKSMLAKGYILGKDALSKAKAFDESHQVSATA 573
            DE  ST   E +Q+VPSAGEAV MAQ+V K+M+AKGY+LGKD LSKAKAFDESHQV+ATA
Sbjct: 97   DERESTHPPERSQYVPSAGEAVIMAQEVVKNMVAKGYVLGKDTLSKAKAFDESHQVTATA 156

Query: 572  TAKVAEMSERIGLTDKICAGVGAVKSVDERYHILDTTKSAVAVTGRTALAAANTVVNSSY 393
             AKVAE +ERIGL DKI AG+ A+KSVD++YH+ D TKSAV+ TGRTA+AAA+TVVNSSY
Sbjct: 157  AAKVAEFTERIGLADKIFAGMEAMKSVDQKYHVSDMTKSAVSATGRTAVAAASTVVNSSY 216

Query: 392  FSKGALWMSDALSRAAKVAADLGSR 318
            FSKGALW+S AL+RAAK AAD+G+R
Sbjct: 217  FSKGALWVSGALNRAAKAAADIGAR 241


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