BLASTX nr result

ID: Panax21_contig00017429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017429
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...   196   3e-48
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...   166   4e-39
ref|XP_002327387.1| predicted protein [Populus trichocarpa] gi|2...   164   8e-39
ref|XP_003610912.1| Far upstream element-binding protein [Medica...   160   1e-37
ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score =  196 bits (497), Expect = 3e-48
 Identities = 109/221 (49%), Positives = 126/221 (57%), Gaps = 28/221 (12%)
 Frame = -1

Query: 580  QWGHRGPYPAQQTGYDYQQRPPYQSQNPQYSLQAYGNYPPQQLAPSSNYG--WEQRPPPT 407
            QWG RGP+P Q TGYDYQ R  Y SQN QY+  +YG YPPQQ+AP S++G  WEQRPP  
Sbjct: 371  QWGPRGPHPGQPTGYDYQ-RGAYPSQNQQYAPPSYGGYPPQQMAPRSSFGSGWEQRPP-A 428

Query: 406  TTQGLPPHXXXXXXXXXXGHATDA------SKLINTHAPGPSPA--VGQPPAQAIYNYGQ 251
              QG P            GH  DA      S  ++ HAPGPSP+  +G PP+Q  YNYGQ
Sbjct: 429  NMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSIHAPGPSPSPGMGPPPSQGNYNYGQ 488

Query: 250  PQGPDYGXXXXXXXXXXXXXXXYGHGASQPSS------------------YPQGTAYPGY 125
            PQGPDYG                GHG  +P                    YPQG A  GY
Sbjct: 489  PQGPDYGQQAQYSQTGPPQQGY-GHGYDEPKYEGQAPTHPPYGGHGSQPVYPQGGAQSGY 547

Query: 124  GPQEQYGKPESYGMPPQGPHAQSYGQPRATQPGNVPYQGPI 2
             PQ+ YGKP+SYGM  Q P AQSYG PRA+QPG+VPYQGP+
Sbjct: 548  PPQQPYGKPQSYGMASQAPAAQSYGPPRASQPGDVPYQGPM 588


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223535201|gb|EEF36880.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 798

 Score =  166 bits (419), Expect = 4e-39
 Identities = 100/219 (45%), Positives = 112/219 (51%), Gaps = 28/219 (12%)
 Frame = -1

Query: 577  WGHRGPYPAQQTGYDYQQRPPYQSQNPQYSLQAYGNYPPQQLAPSSNY--GWEQRPPPTT 404
            WG RGP+ +Q + YDY  R PY SQN QY   +YG YPPQ + P  N+  GWEQRPP   
Sbjct: 397  WGPRGPHSSQPSPYDYHHRGPYPSQNSQYPPPSYGGYPPQHMGPRGNFGSGWEQRPP--N 454

Query: 403  TQGLPPH-XXXXXXXXXXGHATD------ASKLINTHAPGPS--PAVGQPPAQAIYNYGQ 251
             QG   H           GH  D       S  I  HA GPS  P +G PP+QA YNYGQ
Sbjct: 455  MQGPVSHGGGYDYYGGQGGHVPDHPSSAPISNPITGHATGPSPTPGMGHPPSQANYNYGQ 514

Query: 250  PQGPDY-----------------GXXXXXXXXXXXXXXXYGHGASQPSSYPQGTAYPGYG 122
              GPDY                 G               YGHG  QP  YPQ +  PGYG
Sbjct: 515  QHGPDYGHQAPYSQAVSQHGYGHGYDEPKYDSHAQTQHPYGHGNPQP-VYPQASNQPGYG 573

Query: 121  PQEQYGKPESYGMPPQGPHAQSYGQPRATQPGNVPYQGP 5
             Q+QYGK  SYGM PQGP  QSYG PR  QPG++PYQ P
Sbjct: 574  AQQQYGKQPSYGMLPQGP-PQSYGPPRPGQPGDMPYQAP 611


>ref|XP_002327387.1| predicted protein [Populus trichocarpa] gi|222835757|gb|EEE74192.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  164 bits (416), Expect = 8e-39
 Identities = 99/213 (46%), Positives = 113/213 (53%), Gaps = 21/213 (9%)
 Frame = -1

Query: 577 WGHRGPYPAQQTGYDYQQRPPYQSQNPQYSLQAYGNYPPQQLAPSSNY--GWEQRPPPTT 404
           WG RG +  QQ  YDY  R PY +         YG YPPQQ+AP SNY  GWEQRPPP  
Sbjct: 27  WGPRGHHSNQQMPYDYH-RGPYPT---------YGGYPPQQMAPRSNYSSGWEQRPPPNM 76

Query: 403 TQGLPPHXXXXXXXXXXG-HATD--ASKLINTHAPG------PSPAVGQPPAQAIYNYGQ 251
            QG  PH          G H +D   S  ++T  PG      P+P +G PP+Q  YNYGQ
Sbjct: 77  -QGFHPHSGGYDYYSGQGGHVSDHPVSAPMSTPLPGHVSRHSPAPVMGGPPSQVNYNYGQ 135

Query: 250 PQGPDYGXXXXXXXXXXXXXXXY----------GHGASQPSSYPQGTAYPGYGPQEQYGK 101
             GPDYG                          GHG+SQP+ YPQ +  PGYG Q+QYGK
Sbjct: 136 SHGPDYGHQAPYSQAAPSQQSYGYGYDEPKYPYGHGSSQPA-YPQASNQPGYGAQQQYGK 194

Query: 100 PESYGMPPQGPHAQSYGQPRATQPGNVPYQGPI 2
             SYGMP QGP  QSYG PR  QPG+  YQGPI
Sbjct: 195 QPSYGMPSQGPPPQSYGPPRPGQPGDASYQGPI 227


>ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
            gi|355512247|gb|AES93870.1| Far upstream element-binding
            protein [Medicago truncatula]
          Length = 807

 Score =  160 bits (406), Expect = 1e-37
 Identities = 93/222 (41%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
 Frame = -1

Query: 583  PQWGHRGPYPAQQTGYDYQQRPPYQSQNPQYSLQAYGNYPPQQLAPSSNY--GWEQRP-- 416
            PQWG RG +  Q   YDYQ R PY S N  Y+   YGNY PQ +AP S+Y  GWEQRP  
Sbjct: 405  PQWGQRGSHYGQPPSYDYQHRGPYPSHNQSYAPPPYGNY-PQHMAPRSSYGSGWEQRPHQ 463

Query: 415  ----PPTTTQGLPPHXXXXXXXXXXGHATDASKLINTHAPGPS--PAVGQPPAQAIYNYG 254
                PP+   G   +            +      +  H  GPS  P++G  PAQ  YNYG
Sbjct: 464  SFQGPPSHNGGYDYYGGQSGHSSEAPSSAQHPSSVPQHGTGPSPLPSMGPSPAQMNYNYG 523

Query: 253  QPQGPDYG-------------------XXXXXXXXXXXXXXXYGHGASQPSSYPQGTAYP 131
            QPQG DYG                                   GH   QP +YPQ +A  
Sbjct: 524  QPQGQDYGHQTPYQQAGHPQQGYGQGYDESKYENRGPAQYPYGGHSNPQP-TYPQASAQA 582

Query: 130  GYGPQEQYGKPESYGMPP-QGPHAQSYGQPRATQPGNVPYQG 8
             Y P +QYGKP  YG+PP QG H QSYG PRATQPG +PYQG
Sbjct: 583  NYAPPQQYGKPPLYGVPPSQGQHPQSYGHPRATQPGEIPYQG 624


>ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|222862385|gb|EEE99891.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  157 bits (398), Expect = 1e-36
 Identities = 95/212 (44%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
 Frame = -1

Query: 577 WGHRGPYPAQQTGYDYQQRPPYQSQNPQYSLQAYGNYPPQQLAPSSNY--GWEQRPPPTT 404
           WG RGP+  Q+  YDYQ R PY S   QY   AYG+YP Q +AP SNY  GWEQRP    
Sbjct: 192 WGPRGPHSNQKMPYDYQHRGPYPSHGSQYP-PAYGDYP-QHMAPRSNYSSGWEQRP--AN 247

Query: 403 TQGLPPHXXXXXXXXXXGHATD--ASKLINTHAPGPS------PAVGQPPAQAIYNYGQP 248
            QG   H          GHA+D   S  + T  PGP+      P +G PP+Q  Y+YGQ 
Sbjct: 248 VQGPHTHTSGYDYYSQGGHASDHPVSGPMPTPIPGPASRHSPAPVMGGPPSQVNYSYGQS 307

Query: 247 QGPDYGXXXXXXXXXXXXXXXY----------GHGASQPSSYPQGTAYPGYGPQEQYGKP 98
            GPDYG                          G+G+SQP+ Y Q    PGYG Q+QYGK 
Sbjct: 308 HGPDYGHQAPYSQAAPSHQSYGHGYDEPKYPYGYGSSQPA-YSQAGNQPGYGAQQQYGKQ 366

Query: 97  ESYGMPPQGPHAQSYGQPRATQPGNVPYQGPI 2
            S+GMP QGP  QSYG PR  QPG++ YQGP+
Sbjct: 367 PSFGMPSQGPPPQSYGPPRPGQPGDMSYQGPM 398


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