BLASTX nr result

ID: Panax21_contig00017405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017405
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...   102   3e-19
ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase ...    91   8e-16
ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase ...    91   8e-16
ref|XP_002333769.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15
ref|XP_003603541.1| hypothetical protein MTR_3g108900 [Medicago ...    86   2e-14

>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score =  102 bits (253), Expect = 3e-19
 Identities = 72/278 (25%), Positives = 125/278 (44%)
 Frame = -3

Query: 981 RISWKNEIYVKTFLETCIQQVAEYGRSSGSLKPQSWDHVMKTLKSTHNLVVDQKQMKNHY 802
           + +W + I  K F++ C+Q+  +  RSSG LK  +W  + + L+         KQ+KN +
Sbjct: 37  KANWTDPIQRKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEW 96

Query: 801 DYLKGKYQAWCKLKNHFNNFYDSSTNTFNLSEEEWDHWTKENQKAECLKTSPLTFPDLCT 622
           DY+K +Y  W K+     + Y+S T TF+   E+W+ + ++  +A+  +  PL   +   
Sbjct: 97  DYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANMEELE 156

Query: 621 QLFDGVAXXXXXXXXXXXXRPRTITQPNEPEPNELIVLGIEEGVINQAQGSSNPSHNIXX 442
            LF GV                  T         +I  G EE   +    +S PS     
Sbjct: 157 ALFGGV----------------LATGSKNWSSGGVIASGAEE---SSTHSTSMPSETSIS 197

Query: 441 XXXXXXXXXXSFDLEERRPTKRARQSLNQSNNTRLEEEMSNALKLMVHKDSGPSVQECKD 262
                     + D  E    K+ +    Q+     +EEM+  + ++ + + GPSV+EC  
Sbjct: 198 LEEDENLPRNTNDEAEGSKKKQKKGKKEQN-----QEEMNRIINVLENFE-GPSVKECMK 251

Query: 261 KLRDLGWGAQNSLHKMALGIFCESASYREAWMILEEDE 148
            L+ L    ++ L+ +A+  FC+   YRE W+ +E DE
Sbjct: 252 ILKKL-LTYEDPLYYVAINGFCKKKEYREVWVEMESDE 288


>ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine max]
          Length = 167

 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = -3

Query: 1224 QVTLEVKGEPQIRSLSEKLTAGGIAHKLWIEQPENIPSCLATKPYP 1087
            +VTLEVKGEPQI++LSEKLTAGGI HKLWIEQPENIP+CLATKPYP
Sbjct: 107  KVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYP 152


>ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine max]
          Length = 143

 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = -3

Query: 1224 QVTLEVKGEPQIRSLSEKLTAGGIAHKLWIEQPENIPSCLATKPYP 1087
            +VTLEVKGEPQI++LSEKLTAGGI HKLWIEQPENIP+CLATKPYP
Sbjct: 83   KVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYP 128


>ref|XP_002333769.1| predicted protein [Populus trichocarpa]
            gi|224142079|ref|XP_002324386.1| predicted protein
            [Populus trichocarpa] gi|222838441|gb|EEE76806.1|
            predicted protein [Populus trichocarpa]
            gi|222865820|gb|EEF02951.1| predicted protein [Populus
            trichocarpa]
          Length = 140

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = -3

Query: 1224 QVTLEVKGEPQIRSLSEKLTAGGIAHKLWIEQPENIPSCLATKPYP 1087
            +VTLEVKGEPQI +LSEKL AGGIAHKLWIEQPENIP+CLATKPYP
Sbjct: 80   KVTLEVKGEPQILNLSEKLKAGGIAHKLWIEQPENIPTCLATKPYP 125


>ref|XP_003603541.1| hypothetical protein MTR_3g108900 [Medicago truncatula]
            gi|355492589|gb|AES73792.1| hypothetical protein
            MTR_3g108900 [Medicago truncatula]
          Length = 206

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = -3

Query: 1224 QVTLEVKGEPQIRSLSEKLTAGGIAHKLWIEQPENIPSCLATKPYP 1087
            +VTLEVKGE QI++LSEKLT+GGI HKLWIEQPENIP+CLATKPYP
Sbjct: 146  KVTLEVKGELQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYP 191


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