BLASTX nr result

ID: Panax21_contig00017396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017396
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517858.1| 26S proteasome regulatory subunit rpn1, puta...    68   9e-10
ref|XP_002327906.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|NP_194576.5| 26S proteasome regulatory subunit S2 1B [Arabid...    68   9e-10
emb|CAA16886.1| putative protein [Arabidopsis thaliana] gi|72697...    68   9e-10
ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulat...    67   1e-09

>ref|XP_002517858.1| 26S proteasome regulatory subunit rpn1, putative [Ricinus communis]
           gi|223542840|gb|EEF44376.1| 26S proteasome regulatory
           subunit rpn1, putative [Ricinus communis]
          Length = 895

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = -1

Query: 400 AGIITLLHACLDMKAIILGKYHYVLYFLVLAMQ 302
           AG+IT+LHACLDMKAIILGKYHYVLYFLVLAMQ
Sbjct: 779 AGLITMLHACLDMKAIILGKYHYVLYFLVLAMQ 811


>ref|XP_002327906.1| predicted protein [Populus trichocarpa] gi|222837315|gb|EEE75694.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = -1

Query: 400 AGIITLLHACLDMKAIILGKYHYVLYFLVLAMQ 302
           AG+IT+LHACLDMKAIILGKYHYVLYFLVLAMQ
Sbjct: 774 AGLITMLHACLDMKAIILGKYHYVLYFLVLAMQ 806


>ref|NP_194576.5| 26S proteasome regulatory subunit S2 1B [Arabidopsis thaliana]
           gi|75130218|sp|Q6XJG8.1|RPN1B_ARATH RecName: Full=26S
           proteasome non-ATPase regulatory subunit 2 1B; AltName:
           Full=26S proteasome regulatory subunit RPN1 B;
           Short=AtRPN1b; AltName: Full=26S proteasome regulatory
           subunit S2 1B gi|32700012|gb|AAP86656.1| 26S proteasome
           subunit RPN1b [Arabidopsis thaliana]
           gi|332660090|gb|AEE85490.1| 26S proteasome regulatory
           subunit S2 1B [Arabidopsis thaliana]
          Length = 891

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = -1

Query: 400 AGIITLLHACLDMKAIILGKYHYVLYFLVLAMQ 302
           AGI+TLLHACLDMK+IILGKYHYVLYFLVLAMQ
Sbjct: 776 AGIVTLLHACLDMKSIILGKYHYVLYFLVLAMQ 808


>emb|CAA16886.1| putative protein [Arabidopsis thaliana] gi|7269701|emb|CAB79649.1|
           putative protein [Arabidopsis thaliana]
          Length = 1103

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = -1

Query: 400 AGIITLLHACLDMKAIILGKYHYVLYFLVLAMQ 302
           AGI+TLLHACLDMK+IILGKYHYVLYFLVLAMQ
Sbjct: 879 AGIVTLLHACLDMKSIILGKYHYVLYFLVLAMQ 911


>ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like
           [Glycine max]
          Length = 885

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = -1

Query: 400 AGIITLLHACLDMKAIILGKYHYVLYFLVLAMQ 302
           AG+IT+LHACLDMKAI+LGKYHYVLYFLVLAMQ
Sbjct: 770 AGLITMLHACLDMKAIVLGKYHYVLYFLVLAMQ 802


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