BLASTX nr result

ID: Panax21_contig00017391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017391
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149142.1| GATA zinc finger family protein [Zea mays] g...   151   6e-35
tpg|DAA47614.1| TPA: putative GATA transcription factor family p...   150   8e-35
gb|ACN31108.1| unknown [Zea mays]                                     150   8e-35
ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like ...   148   5e-34
emb|CAC28528.1| GATA-1 zinc finger protein [Nicotiana tabacum]        144   1e-32

>ref|NP_001149142.1| GATA zinc finger family protein [Zea mays]
           gi|195625042|gb|ACG34351.1| GATA zinc finger family
           protein [Zea mays]
          Length = 299

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/153 (49%), Positives = 92/153 (60%), Gaps = 25/153 (16%)
 Frame = -1

Query: 481 KTCTHCQVTETPQWRDGPMGPRTLCKACGVRYWLERKKPSQLPKDSEV---KENHPHMHR 311
           K C++C  ++TP+WRDGP G + +C ACG+R   E +  ++     E    KE  P   R
Sbjct: 146 KMCSNCLSSQTPRWRDGPSGRQMMCSACGMRLKPETRLSAEQQYGQEEPTRKEQEPDRKR 205

Query: 310 KT----------------------CTHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLL 197
           K                       C HC  +KTPQWR GP+GPKTLCNACGVR++SGRLL
Sbjct: 206 KKAAKKTCYESSDAPPSSDQQEKRCAHCLSSKTPQWRAGPLGPKTLCNACGVRFKSGRLL 265

Query: 196 PEYRPVASPTFVPSLHSNSHKKVIQMRNKVIQE 98
           PEYRP  SPTFV  LHSNSHKKV+QMR  V Q+
Sbjct: 266 PEYRPANSPTFVSCLHSNSHKKVMQMRQAVAQQ 298


>tpg|DAA47614.1| TPA: putative GATA transcription factor family protein [Zea mays]
          Length = 281

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/153 (49%), Positives = 92/153 (60%), Gaps = 25/153 (16%)
 Frame = -1

Query: 481 KTCTHCQVTETPQWRDGPMGPRTLCKACGVRYWLERKKPSQLPKDSEV---KENHPHMHR 311
           K C++C  ++TP+WRDGP G + +C ACG+R   E +  ++     E    KE  P   R
Sbjct: 128 KMCSNCLSSQTPRWRDGPSGRQMMCSACGMRLKPETRLSAEQQCGQEEPTRKEQEPDRKR 187

Query: 310 KT----------------------CTHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLL 197
           K                       C HC  +KTPQWR GP+GPKTLCNACGVR++SGRLL
Sbjct: 188 KKAAKKTCYESSDAPPSSDQQEKRCAHCLSSKTPQWRAGPLGPKTLCNACGVRFKSGRLL 247

Query: 196 PEYRPVASPTFVPSLHSNSHKKVIQMRNKVIQE 98
           PEYRP  SPTFV  LHSNSHKKV+QMR  V Q+
Sbjct: 248 PEYRPANSPTFVSCLHSNSHKKVMQMRQAVAQQ 280


>gb|ACN31108.1| unknown [Zea mays]
          Length = 299

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/153 (49%), Positives = 92/153 (60%), Gaps = 25/153 (16%)
 Frame = -1

Query: 481 KTCTHCQVTETPQWRDGPMGPRTLCKACGVRYWLERKKPSQLPKDSEV---KENHPHMHR 311
           K C++C  ++TP+WRDGP G + +C ACG+R   E +  ++     E    KE  P   R
Sbjct: 146 KMCSNCLSSQTPRWRDGPSGRQMMCSACGMRLKPETRLSAEQQCGQEEPTRKEQEPDRKR 205

Query: 310 KT----------------------CTHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLL 197
           K                       C HC  +KTPQWR GP+GPKTLCNACGVR++SGRLL
Sbjct: 206 KKAAKKTCYESSDAPPSSDQQEKRCAHCLSSKTPQWRAGPLGPKTLCNACGVRFKSGRLL 265

Query: 196 PEYRPVASPTFVPSLHSNSHKKVIQMRNKVIQE 98
           PEYRP  SPTFV  LHSNSHKKV+QMR  V Q+
Sbjct: 266 PEYRPANSPTFVSCLHSNSHKKVMQMRQAVAQQ 298


>ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 340

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
 Frame = -1

Query: 343 EVKENHPHMHRKTCTHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLLPEYRPVASPTF 164
           E+ +N P    + C HC++TKTPQWR GPMGPKTLCNACGVRY+SGRL PEYRP ASPTF
Sbjct: 231 EMNQNPPAQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTF 290

Query: 163 VPSLHSNSHKKVIQMRNKVIQESSMPEMNP-AMLSPPEIFP 44
           VP+LHSNSHKKVI+MRNK  + ++M    P    SPPE+ P
Sbjct: 291 VPALHSNSHKKVIEMRNKACENTAMTASPPTGTTSPPELIP 331



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
 Frame = -1

Query: 481 KTCTHCQVTETPQWRDGPMGPRTLCKACGVRYWLERKKPSQLPKDSE--VKENHPHMHR- 311
           + C HC++T+TPQWR GPMGP+TLC ACGVRY   R  P   P  S   V   H + H+ 
Sbjct: 242 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPALHSNSHKK 301

Query: 310 ------KTCTHCQVTKTP 275
                 K C +  +T +P
Sbjct: 302 VIEMRNKACENTAMTASP 319


>emb|CAC28528.1| GATA-1 zinc finger protein [Nicotiana tabacum]
          Length = 305

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/137 (54%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
 Frame = -1

Query: 406 KACGVRYWLERKKPSQL---PKDSEVKENHPHMHR----KTCTHCQVTKTPQWREGPMGP 248
           K C  R   E+K+   L   P+ ++V +      +    K CTHCQVTKTPQWREGP+GP
Sbjct: 161 KTCDARKGKEKKRKMSLLSVPQIADVTKKKTTSGQQFSFKKCTHCQVTKTPQWREGPLGP 220

Query: 247 KTLCNACGVRYRSGRLLPEYRPVASPTFVPSLHSNSHKKVIQMRNKVI--QESSMPEMN- 77
           KTLCNACGVRYRSGRL PEYRP ASPTFVP+LHSNSH+KV++MR K I  + S++ E + 
Sbjct: 221 KTLCNACGVRYRSGRLFPEYRPAASPTFVPTLHSNSHRKVVEMRKKAIYGETSALEEPHN 280

Query: 76  -----PAMLSPPEIFPM 41
                P M   PE  PM
Sbjct: 281 VIVEGPPMSPAPEFVPM 297



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = -1

Query: 481 KTCTHCQVTETPQWRDGPMGPRTLCKACGVRYWLERKKPSQLPKDSE--VKENHPHMHRK 308
           K CTHCQVT+TPQWR+GP+GP+TLC ACGVRY   R  P   P  S   V   H + HRK
Sbjct: 200 KKCTHCQVTKTPQWREGPLGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPTLHSNSHRK 259


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