BLASTX nr result
ID: Panax21_contig00017387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00017387 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ... 122 3e-32 gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ... 122 8e-32 ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t... 121 2e-31 ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ... 119 2e-29 ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R... 120 4e-29 >ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus] gi|449519543|ref|XP_004166794.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Cucumis sativus] Length = 528 Score = 122 bits (307), Expect(2) = 3e-32 Identities = 58/74 (78%), Positives = 66/74 (89%) Frame = +3 Query: 3 NKNSVPGDKSAIVPGGIRIGTPAMTTRGFTEKEFTSVADFIHEGVKITQEAKKLVSSPKL 182 NKNSVPGDKSA+VPGGIRIG+PAMTTRGFTEKEF +VADFIHEGVKIT +AK L KL Sbjct: 432 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKL 491 Query: 183 QDFLQFITSPDFPL 224 Q+FL+F+T+ DFPL Sbjct: 492 QEFLKFVTTSDFPL 505 Score = 40.8 bits (94), Expect(2) = 3e-32 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = +2 Query: 305 PLKDQVLDLKSRVEGLATQFPLPGL 379 PL D++ DL+SRVE L TQFP+PGL Sbjct: 504 PLTDRISDLRSRVEALTTQFPIPGL 528 >gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides] Length = 529 Score = 122 bits (307), Expect(2) = 8e-32 Identities = 58/74 (78%), Positives = 66/74 (89%) Frame = +3 Query: 3 NKNSVPGDKSAIVPGGIRIGTPAMTTRGFTEKEFTSVADFIHEGVKITQEAKKLVSSPKL 182 NKNSVPGDKSA+VPGGIRIG+PAMTTRGFTE+EF + AD IHEGV+I+ EAKK VS KL Sbjct: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQISLEAKKSVSGSKL 492 Query: 183 QDFLQFITSPDFPL 224 QDFL+F+ SPDFPL Sbjct: 493 QDFLKFVKSPDFPL 506 Score = 39.3 bits (90), Expect(2) = 8e-32 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 305 PLKDQVLDLKSRVEGLATQFPLPGL 379 PL D+V DL+ RVE L TQFP+PGL Sbjct: 505 PLTDKVSDLRRRVEALTTQFPIPGL 529 >ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa] gi|222855489|gb|EEE93036.1| serine hydroxymethyltransferase 8 [Populus trichocarpa] Length = 529 Score = 121 bits (304), Expect(2) = 2e-31 Identities = 58/74 (78%), Positives = 65/74 (87%) Frame = +3 Query: 3 NKNSVPGDKSAIVPGGIRIGTPAMTTRGFTEKEFTSVADFIHEGVKITQEAKKLVSSPKL 182 NKNSVPGDKSA+VPGGIRIG+PAMTTRGFTE EF + AD IHEGV+I+ EAKK VS KL Sbjct: 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQISLEAKKSVSGSKL 492 Query: 183 QDFLQFITSPDFPL 224 QDFL+F+ SPDFPL Sbjct: 493 QDFLKFVKSPDFPL 506 Score = 38.9 bits (89), Expect(2) = 2e-31 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 305 PLKDQVLDLKSRVEGLATQFPLPGL 379 PL D+V DL+ RVE L TQFP+PGL Sbjct: 505 PLTDKVSDLQRRVEALTTQFPIPGL 529 >ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis vinifera] gi|296081614|emb|CBI20619.3| unnamed protein product [Vitis vinifera] Length = 528 Score = 119 bits (298), Expect(2) = 2e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 3 NKNSVPGDKSAIVPGGIRIGTPAMTTRGFTEKEFTSVADFIHEGVKITQEAKKLVSSPKL 182 NKNSVPGDKSA+VPGGIRIG+PAMTTRGF+EKEF + ADFIHEGV+++ EAKK VS KL Sbjct: 432 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLSLEAKKSVSGSKL 491 Query: 183 QDFLQFITSPDFPL 224 DF++F+TSPDF L Sbjct: 492 LDFMKFVTSPDFSL 505 Score = 34.7 bits (78), Expect(2) = 2e-29 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 308 LKDQVLDLKSRVEGLATQFPLPGL 379 L D+V DL+ RVE L TQFP+PGL Sbjct: 505 LIDRVSDLQRRVETLTTQFPMPGL 528 >ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis] gi|223541045|gb|EEF42602.1| serine hydroxymethyltransferase, putative [Ricinus communis] Length = 527 Score = 120 bits (302), Expect(2) = 4e-29 Identities = 57/74 (77%), Positives = 65/74 (87%) Frame = +3 Query: 3 NKNSVPGDKSAIVPGGIRIGTPAMTTRGFTEKEFTSVADFIHEGVKITQEAKKLVSSPKL 182 NKNSVPGDKSA+VPGGIRIG+PAMTTRGFTE+EF + ADFIHEGV+IT EAKK VS KL Sbjct: 431 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQITTEAKKSVSGSKL 490 Query: 183 QDFLQFITSPDFPL 224 QDF++ + SPDF L Sbjct: 491 QDFMKLVASPDFSL 504 Score = 32.3 bits (72), Expect(2) = 4e-29 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +2 Query: 308 LKDQVLDLKSRVEGLATQFPLPGL 379 L +V DL++RVE LATQF +PG+ Sbjct: 504 LASEVSDLQTRVEALATQFSIPGV 527