BLASTX nr result

ID: Panax21_contig00017345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017345
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped co...   305   1e-80
ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...   292   1e-76
ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_004134780.1| PREDICTED: ATPase family AAA domain-containi...   280   3e-73
ref|XP_004166040.1| PREDICTED: ATPase family AAA domain-containi...   265   2e-68

>ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped complexes-like [Vitis
            vinifera] gi|297741773|emb|CBI33002.3| unnamed protein
            product [Vitis vinifera]
          Length = 596

 Score =  305 bits (782), Expect = 1e-80
 Identities = 175/335 (52%), Positives = 219/335 (65%), Gaps = 12/335 (3%)
 Frame = -2

Query: 1042 MASIRRLARTIRTCCTVASRKTLTLPIAASPLSLRRFYHSSCEHQIRTYVPEGWPRLVHE 863
            MAS+ RL +  ++   + S KTLT P    P    RF H   E QI   + E     V  
Sbjct: 1    MASVWRLLKAAQSWRPIVSPKTLTPPPLRFP---PRFCHRPFEQQINPRISEAQLPPVSV 57

Query: 862  ILGSYFIPAIFAGLLGVGLLEIAHADANEADGKTP-------TPTESPPSYADXXXXXXX 704
             +    +P++  GL G GLLEIAHA+++    KTP       +P+ESPPSY +       
Sbjct: 58   SI----VPSVLVGLFGFGLLEIAHAESDPGADKTPLPSQSSPSPSESPPSYTNLEENARK 113

Query: 703  XXXXXXXXXXXKGMKYGSYPRFIVAVKGQKVTIKFQIPPSCEMALLISNLVSQLGVKVDK 524
                       KGMKYGSYPRF VA+KGQKVTIKFQIPP+CE+  LI+ LV+QLG+KV++
Sbjct: 114  LRDRLEELIRTKGMKYGSYPRFTVALKGQKVTIKFQIPPTCEVPCLIAKLVAQLGMKVEE 173

Query: 523  SSAGSDMMLRAWDSGVAWQLTLARPKTQKEVGVIDGDSS-IKAQEEDLCILMFRSLISSD 347
             S GSDM++RAWDSG+AWQL L+R   Q + G     S    A E DLCIL+F+SLIS+D
Sbjct: 174  RSGGSDMIMRAWDSGIAWQLMLSRLGKQNKTGAEQVHSQYTNANEGDLCILIFQSLISAD 233

Query: 346  RAEIEFIKRGSFSREELDALVSVLQLAG----QIKTLEQRPRGNTTQMPSTGKSVSSLEA 179
            +AEIEFIK+GSFS EELDALVSVLQ AG    Q KTLE+RPRG+  QM S  KS++SLEA
Sbjct: 234  KAEIEFIKQGSFSSEELDALVSVLQFAGGRVEQNKTLERRPRGDAPQMHSAQKSIASLEA 293

Query: 178  MGVKIYGLNEPNMGNSKAEISWDNIAGYSQQKRNV 74
            MGV+++G +EP  G SK E+ WDNIAGY QQKR +
Sbjct: 294  MGVRVFGADEPQGGLSKNEVLWDNIAGYDQQKRQI 328


>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223542263|gb|EEF43805.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 587

 Score =  292 bits (747), Expect = 1e-76
 Identities = 151/265 (56%), Positives = 195/265 (73%), Gaps = 4/265 (1%)
 Frame = -2

Query: 856 GSYF--IPAIFAGLLGVGLLEIAHADANEADGKTPTPTESPPSYADXXXXXXXXXXXXXX 683
           G Y+  +PA+FAG LG+G+ ++A+AD+++A  K   P+ESP SY D              
Sbjct: 53  GPYYSILPAVFAGFLGLGMFQVAYADSDQAAAKPSLPSESPSSYKDLEEIATKERQRIEG 112

Query: 682 XXXXKGMKYGSYPRFIVAVKGQKVTIKFQIPPSCEMALLISNLVSQLGVKVDKSSAGSDM 503
               +G+K GSYPRF+VAVKGQKVTIKFQIPP+C+   LI+NLVS LG+KVD+ + GSDM
Sbjct: 113 LLKLRGIKNGSYPRFMVAVKGQKVTIKFQIPPACDALHLIANLVSNLGLKVDERAGGSDM 172

Query: 502 MLRAWDSGVAWQLTLARPKTQKEVGVIDGD-SSIKAQEEDLCILMFRSLISSDRAEIEFI 326
           +LRAWDS VAWQLTL+ P+  KE GV  G    +   E DLCI +FRSLIS+D+AEIEFI
Sbjct: 173 LLRAWDSAVAWQLTLSSPEKHKEAGVDKGQFVDMNTAEGDLCIFLFRSLISTDKAEIEFI 232

Query: 325 KRGSFSREELDALVSVLQLAG-QIKTLEQRPRGNTTQMPSTGKSVSSLEAMGVKIYGLNE 149
           K GS S  ELDALVSVLQLAG ++K+L++ P     +MPS  KSV++LE+MGV+IYGLNE
Sbjct: 233 KGGSLSTTELDALVSVLQLAGDRLKSLQRIPGEGAARMPSADKSVATLESMGVRIYGLNE 292

Query: 148 PNMGNSKAEISWDNIAGYSQQKRNV 74
           P++ +SK EISW+NIAGY QQK+ +
Sbjct: 293 PHINSSKGEISWNNIAGYDQQKQEI 317


>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  288 bits (737), Expect = 2e-75
 Identities = 158/290 (54%), Positives = 200/290 (68%), Gaps = 7/290 (2%)
 Frame = -2

Query: 922 SCEHQIRTYVPE----GWPRLVHEILGSYFIPAIFAGLLGVGLLEIAHADANEADGKTPT 755
           S  HQI +   E     W    +E+  S F PA+ A  +GVG+L++AHAD++E   K P 
Sbjct: 6   SFNHQIHSSSSEILRPRWASNANELPNSLF-PALLASFIGVGMLQVAHADSDENASKPPL 64

Query: 754 PTESPPS-YADXXXXXXXXXXXXXXXXXXKGMKYGSYPRFIVAVKGQKVTIKFQIPPSCE 578
           P+ES PS Y D                  KG+KYGS+PRF +AVKGQKVTIKFQIPP+C+
Sbjct: 65  PSESSPSSYGDLEEIAKKERQRIEELLKSKGIKYGSFPRFTIAVKGQKVTIKFQIPPACD 124

Query: 577 MALLISNLVSQLGVKVDKSSAGSDMMLRAWDSGVAWQLTLARPKTQKEVGVIDGDS-SIK 401
              LI+NLVS LGVKVD+  AGSDM LRAWDS VAWQLTL  P+ QKE+    G S  +K
Sbjct: 125 TPQLIANLVSNLGVKVDERGAGSDMSLRAWDSAVAWQLTLNYPEKQKEISGERGHSGDMK 184

Query: 400 AQEEDLCILMFRSLISSDRAEIEFIKRGSFSREELDALVSVLQLAG-QIKTLEQRPRGNT 224
             E DLCIL+FRSLISSD+ E+EFIK GS S  ELDA VSVLQLAG +++ L+++P   +
Sbjct: 185 VPEGDLCILLFRSLISSDKPEVEFIKSGSLSTTELDAFVSVLQLAGSKLRPLDRKPAEGS 244

Query: 223 TQMPSTGKSVSSLEAMGVKIYGLNEPNMGNSKAEISWDNIAGYSQQKRNV 74
            ++PS  KSV+SLE+MGV+IYGL+EP + +S  +ISW+NIAGY QQKR +
Sbjct: 245 ARVPSADKSVASLESMGVRIYGLDEPLVNSSSNDISWENIAGYDQQKREI 294


>ref|XP_004134780.1| PREDICTED: ATPase family AAA domain-containing protein 1-B-like
            [Cucumis sativus]
          Length = 585

 Score =  280 bits (717), Expect = 3e-73
 Identities = 161/329 (48%), Positives = 217/329 (65%), Gaps = 6/329 (1%)
 Frame = -2

Query: 1042 MASIRRLARTIRTCCTVASRKTLTLPIAASPLSLRRFYHSSCEHQIRTYVPEGWPRLVHE 863
            M+ + R++RT R    +AS K      A+    LR F H   EH     +  G       
Sbjct: 1    MSVLNRISRTARAWRILASFKLKESSSASQSFYLRHFGHQP-EHFKPGSLSNGREPC--- 56

Query: 862  ILGSYFIPAIFAGLLGVGLLEIAHADANEADGKTPTPTESPPSYADXXXXXXXXXXXXXX 683
                +  PAI AG++GVG +EIA+A+A E+   TP P     ++AD              
Sbjct: 57   ----FLYPAIVAGMVGVGAMEIAYAEAEESTS-TPPPPRDLSTHADMEDIAKKERLRITE 111

Query: 682  XXXXK-GMKYGSYPRFIVAVKGQKVTIKFQIPPSCEMALLISNLVSQLGVKVDKSSAGSD 506
                  G KYG+ PRF V VKGQKV+IKFQ+PPSCE++ LI+NLVS LG+KV++++ GSD
Sbjct: 112  QLKRNKGTKYGACPRFTVGVKGQKVSIKFQVPPSCEVSHLIANLVSNLGLKVEETAGGSD 171

Query: 505  MMLRAWDSGVAWQLTLARPKTQKEVGVIDGDS-SIKAQEEDLCILMFRSLISSDRAEIEF 329
            M+LRAWDS VAWQLTL+RPK+QKE G   G+S  + A + DL +L+F SLI+SD+ EIEF
Sbjct: 172  MLLRAWDSPVAWQLTLSRPKSQKEAGENKGNSIEMDADDGDLTVLIFHSLITSDKTEIEF 231

Query: 328  IKRGSFSREELDALVSVLQLA----GQIKTLEQRPRGNTTQMPSTGKSVSSLEAMGVKIY 161
            IK+GS S +ELD+LVSVLQLA    G+ ++ E++ +  +TQMPS+ KS+SSLEAMGVK+Y
Sbjct: 232  IKQGSLSTKELDSLVSVLQLAGGRLGESRSFERKSKEESTQMPSSEKSISSLEAMGVKVY 291

Query: 160  GLNEPNMGNSKAEISWDNIAGYSQQKRNV 74
            GL+ P++ ++K EISWDNIAGY QQKR +
Sbjct: 292  GLDGPHLNSTKNEISWDNIAGYDQQKREI 320


>ref|XP_004166040.1| PREDICTED: ATPase family AAA domain-containing protein 1-B-like
           [Cucumis sativus]
          Length = 521

 Score =  265 bits (676), Expect = 2e-68
 Identities = 140/256 (54%), Positives = 188/256 (73%), Gaps = 6/256 (2%)
 Frame = -2

Query: 823 LLGVGLLEIAHADANEADGKTPTPTESPPSYADXXXXXXXXXXXXXXXXXXK-GMKYGSY 647
           ++GVG +EIA+A+A E+   TP P     ++AD                    G KYG+ 
Sbjct: 1   MVGVGAMEIAYAEAEESTS-TPPPPRDLSTHADMEDIAKKERLRITEQLKRNKGTKYGAC 59

Query: 646 PRFIVAVKGQKVTIKFQIPPSCEMALLISNLVSQLGVKVDKSSAGSDMMLRAWDSGVAWQ 467
           PRF V VKGQKV+IKFQ+PPSCE++ LI+NLVS LG+KV++++ GSDM+LRAWDS VAWQ
Sbjct: 60  PRFTVGVKGQKVSIKFQVPPSCEVSHLIANLVSNLGLKVEETAGGSDMLLRAWDSPVAWQ 119

Query: 466 LTLARPKTQKEVGVIDGDS-SIKAQEEDLCILMFRSLISSDRAEIEFIKRGSFSREELDA 290
           LTL+RPK+QKE G   G+S  + A + DL +L+F SLI+SD+ EIEFIK+GS S +ELD+
Sbjct: 120 LTLSRPKSQKEAGENKGNSIEMDADDGDLTVLIFHSLITSDKTEIEFIKQGSLSTKELDS 179

Query: 289 LVSVLQLA----GQIKTLEQRPRGNTTQMPSTGKSVSSLEAMGVKIYGLNEPNMGNSKAE 122
           LVSVLQLA    G+ ++ E++ +  +TQMPS+ KS+SSLEAMGVK+YGL+ P++ ++K E
Sbjct: 180 LVSVLQLAGGRLGESRSFERKSKEESTQMPSSEKSISSLEAMGVKVYGLDGPHLNSTKNE 239

Query: 121 ISWDNIAGYSQQKRNV 74
           ISWDNIAGY QQKR +
Sbjct: 240 ISWDNIAGYDQQKREI 255


Top