BLASTX nr result

ID: Panax21_contig00017341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017341
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001783343.1| SWI/SNF class chromatin remodeling complex p...    60   2e-07
gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana]           59   3e-07
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...    59   3e-07
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551...    59   3e-07
ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arab...    59   3e-07

>ref|XP_001783343.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
            patens subsp. patens] gi|162665144|gb|EDQ51838.1| SWI/SNF
            class chromatin remodeling complex protein
            [Physcomitrella patens subsp. patens]
          Length = 2174

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 360  NPQVDLQAQARAHRIGQKREVLVLRFETVSS 268
            NPQVDLQAQARAHRIGQKR+VLVLRFETV S
Sbjct: 1903 NPQVDLQAQARAHRIGQKRDVLVLRFETVKS 1933


>gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana]
          Length = 3543

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -2

Query: 360  NPQVDLQAQARAHRIGQKREVLVLRFETVSS 268
            NPQVDLQAQARAHRIGQK++VLVLRFETV+S
Sbjct: 1172 NPQVDLQAQARAHRIGQKKDVLVLRFETVNS 1202


>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -2

Query: 360  NPQVDLQAQARAHRIGQKREVLVLRFETVSS 268
            NPQVDLQAQARAHRIGQK++VLVLRFETVS+
Sbjct: 1423 NPQVDLQAQARAHRIGQKKDVLVLRFETVSN 1453


>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3312

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -2

Query: 360  NPQVDLQAQARAHRIGQKREVLVLRFETVSS 268
            NPQVDLQAQARAHRIGQK++VLVLRFETVS+
Sbjct: 1423 NPQVDLQAQARAHRIGQKKDVLVLRFETVSN 1453


>ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp.
            lyrata] gi|297326777|gb|EFH57197.1| hypothetical protein
            ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata]
          Length = 3451

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -2

Query: 360  NPQVDLQAQARAHRIGQKREVLVLRFETVSS 268
            NPQVDLQAQARAHRIGQK++VLVLRFETV+S
Sbjct: 1168 NPQVDLQAQARAHRIGQKKDVLVLRFETVNS 1198


Top