BLASTX nr result

ID: Panax21_contig00017338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017338
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Viti...   488   e-135
ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like ...   448   e-123
emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]   436   e-120
ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycin...   434   e-119
ref|XP_002309063.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117

>ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 388

 Score =  488 bits (1256), Expect = e-135
 Identities = 253/390 (64%), Positives = 281/390 (72%)
 Frame = -2

Query: 1417 MAGNEPSEIQIRVNSKQGGNIIHPVEVGDTPPLLSSAPTPIQNQIVYREIKHFKKWVPWL 1238
            MA +  S I+IRV SK+G N+IHPVEV DTPPLL S P+P    +VYREIKHFKKWVPWL
Sbjct: 1    MARDPSSSIEIRVLSKRGSNVIHPVEV-DTPPLLPS-PSPGPVPVVYREIKHFKKWVPWL 58

Query: 1237 IPSFVVANIIMFVITMYVNNCPKNSVSCVAGFLGRLSFQPFKENPLLGPSSSALEKVGAL 1058
            IPSFVVANIIMF ITMYVNNCPKNS+SC+A FLGR SFQPFKENPLLGPSSS L+K+GAL
Sbjct: 59   IPSFVVANIIMFGITMYVNNCPKNSISCIADFLGRFSFQPFKENPLLGPSSSTLQKMGAL 118

Query: 1057 DVSKVVDKHQGWRLITCMWLHGGVFHLLANMLSLVVIGIRLEQEFGFVRIGLLYVISGFG 878
            DVS+VVD+HQGWRLITC+WLHGGVFHLLANMLSL+VIGIRLEQEFGFV++GLLYVISGFG
Sbjct: 119  DVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFG 178

Query: 877  GSLLSALFIQSNISVXXXXXXXXXXXXXXSELITNWTIYANKXXXXXXXXXXXXXXXXXX 698
            GSLLS LFIQ NISV              SELITNW+IYANK                  
Sbjct: 179  GSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVG 238

Query: 697  XLPNVDNFAHXXXXXXXXXXXXXXLIRPQFGWVNQRYAPPGYSATVAKPKFMMYQRIXXX 518
             LP+VDNFAH              LIRPQFGWV+Q YA P +S T  KPKF  YQ I   
Sbjct: 239  ILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHS-TSPKPKFKTYQCILWV 297

Query: 517  XXXXXXXXXXXXXXXXXLRGVDLNDHCSWCHYMSCVPTSRWSCNTRPVSCMSEQTGNQLS 338
                             LRGVD ND CSWCHY+SCVPTS+WSC T P  C+S Q GNQL+
Sbjct: 298  ASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSCKTEPAYCLSNQIGNQLN 357

Query: 337  LTCSNNNKTRTYTLMNASSSQIQGLCSQLC 248
            LTCS+N K+  Y L + +SSQIQGLCSQLC
Sbjct: 358  LTCSSNGKSSIYLLADPTSSQIQGLCSQLC 387


>ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 385

 Score =  448 bits (1153), Expect = e-123
 Identities = 228/385 (59%), Positives = 260/385 (67%)
 Frame = -2

Query: 1402 PSEIQIRVNSKQGGNIIHPVEVGDTPPLLSSAPTPIQNQIVYREIKHFKKWVPWLIPSFV 1223
            P EI +RVNSK+G  ++HPV   +T  +    P          E+KH++KW  WLIP FV
Sbjct: 7    PLEIHLRVNSKRGTTMVHPVAAAETVEVPIQYPRE-------EEVKHYRKWFSWLIPLFV 59

Query: 1222 VANIIMFVITMYVNNCPKNSVSCVAGFLGRLSFQPFKENPLLGPSSSALEKVGALDVSKV 1043
            VANI+MFVITMYVNNCP+NSVSC+A FLGR SFQPFKENPLLGPSS  L+K+GALDVS+V
Sbjct: 60   VANIVMFVITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRV 119

Query: 1042 VDKHQGWRLITCMWLHGGVFHLLANMLSLVVIGIRLEQEFGFVRIGLLYVISGFGGSLLS 863
            V +HQGWRLITCMWLH GVFHLLANML ++VIGIRLEQEFGFV IGLL+VISGFGGSLLS
Sbjct: 120  VHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLS 179

Query: 862  ALFIQSNISVXXXXXXXXXXXXXXSELITNWTIYANKXXXXXXXXXXXXXXXXXXXLPNV 683
            ALFIQSNISV              SELITNW+IY NK                   LP+V
Sbjct: 180  ALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAVGILPHV 239

Query: 682  DNFAHXXXXXXXXXXXXXXLIRPQFGWVNQRYAPPGYSATVAKPKFMMYQRIXXXXXXXX 503
            DNFAH              LIRPQFGWVNQRYAP  YS    KPKF  YQ I        
Sbjct: 240  DNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILWVFSLII 299

Query: 502  XXXXXXXXXXXXLRGVDLNDHCSWCHYMSCVPTSRWSCNTRPVSCMSEQTGNQLSLTCSN 323
                        L+GVD NDHCSWCHY+SCVPTS+WSC+T    C S Q GNQL++TCS+
Sbjct: 300  LVVGLSVGLVALLQGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCQSNQLGNQLNVTCSS 359

Query: 322  NNKTRTYTLMNASSSQIQGLCSQLC 248
            N K+ TY + N +SSQIQ LC+QLC
Sbjct: 360  NGKSSTYFMQNPTSSQIQQLCTQLC 384


>emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
          Length = 754

 Score =  436 bits (1122), Expect = e-120
 Identities = 230/364 (63%), Positives = 255/364 (70%)
 Frame = -2

Query: 1417 MAGNEPSEIQIRVNSKQGGNIIHPVEVGDTPPLLSSAPTPIQNQIVYREIKHFKKWVPWL 1238
            MA +  S I+IRV SK+G N+IHPVEV DTPPLL S P+P    +VYREIKHFKKWVPWL
Sbjct: 1    MARDPSSSIEIRVLSKRGSNVIHPVEV-DTPPLLPS-PSPGPVPVVYREIKHFKKWVPWL 58

Query: 1237 IPSFVVANIIMFVITMYVNNCPKNSVSCVAGFLGRLSFQPFKENPLLGPSSSALEKVGAL 1058
            IPSFVVANIIMF ITMYVNNCPKNS+SC+A FLGR SFQPFKENPLLGPSSS L+K+GAL
Sbjct: 59   IPSFVVANIIMFGITMYVNNCPKNSISCIADFLGRFSFQPFKENPLLGPSSSTLQKMGAL 118

Query: 1057 DVSKVVDKHQGWRLITCMWLHGGVFHLLANMLSLVVIGIRLEQEFGFVRIGLLYVISGFG 878
            DVS+VVD+HQGWRLITC+WLHGGVFHLLANMLSL+VIGIRLEQEFGFV++GLLYVISGFG
Sbjct: 119  DVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFG 178

Query: 877  GSLLSALFIQSNISVXXXXXXXXXXXXXXSELITNWTIYANKXXXXXXXXXXXXXXXXXX 698
            GSLLS LFIQ NISV              SELITNW+IYANK                  
Sbjct: 179  GSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVG 238

Query: 697  XLPNVDNFAHXXXXXXXXXXXXXXLIRPQFGWVNQRYAPPGYSATVAKPKFMMYQRIXXX 518
             LP+VDNFAH              LIRPQFGWV+Q YA P +S T  KPKF  YQ I   
Sbjct: 239  ILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHS-TSPKPKFKTYQCILWV 297

Query: 517  XXXXXXXXXXXXXXXXXLRGVDLNDHCSWCHYMSCVPTSRWSCNTRPVSCMSEQTGNQLS 338
                             LRGVD ND CSWCHY+SCVPTS+WSC T P  C+       ++
Sbjct: 298  ASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSCKTEPAYCLMAMAVRAVN 357

Query: 337  LTCS 326
             TCS
Sbjct: 358  -TCS 360


>ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycine max]
            gi|255644920|gb|ACU22960.1| unknown [Glycine max]
          Length = 384

 Score =  434 bits (1117), Expect = e-119
 Identities = 225/386 (58%), Positives = 255/386 (66%), Gaps = 1/386 (0%)
 Frame = -2

Query: 1402 PSEIQIRVNSKQGGN-IIHPVEVGDTPPLLSSAPTPIQNQIVYREIKHFKKWVPWLIPSF 1226
            P EI +RVNSK+GG  ++HPV          +   P+Q       +KH++KW  WLIP F
Sbjct: 8    PLEIHLRVNSKRGGTTMVHPV----------ATAVPVQYPREEEGVKHYRKWFAWLIPLF 57

Query: 1225 VVANIIMFVITMYVNNCPKNSVSCVAGFLGRLSFQPFKENPLLGPSSSALEKVGALDVSK 1046
            VVAN+ MF ITMYVNNCP+NSVSC+A FLGR SFQPFKENPLLGPSS  L+K+GALDVS+
Sbjct: 58   VVANVAMFAITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSR 117

Query: 1045 VVDKHQGWRLITCMWLHGGVFHLLANMLSLVVIGIRLEQEFGFVRIGLLYVISGFGGSLL 866
            VV KHQGWRL+TCMWLH GVFHLLANML ++VIGIRLEQEFGFV IGLL+ ISGFGGSLL
Sbjct: 118  VVHKHQGWRLVTCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFFISGFGGSLL 177

Query: 865  SALFIQSNISVXXXXXXXXXXXXXXSELITNWTIYANKXXXXXXXXXXXXXXXXXXXLPN 686
            SALFIQSNISV              SELITNW+IY NK                   LP+
Sbjct: 178  SALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLAALLTLVIIIVINLAVGILPH 237

Query: 685  VDNFAHXXXXXXXXXXXXXXLIRPQFGWVNQRYAPPGYSATVAKPKFMMYQRIXXXXXXX 506
            VDNFAH              LIRPQFGWVNQRYAP  YS   +KPKF  YQ I       
Sbjct: 238  VDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRSKPKFKKYQCILWVLSLI 297

Query: 505  XXXXXXXXXXXXXLRGVDLNDHCSWCHYMSCVPTSRWSCNTRPVSCMSEQTGNQLSLTCS 326
                         LRGVD ND CSWCHY+SCVPTS+WSC+T    C S Q GNQL++TCS
Sbjct: 298  ILVVGLSVGLVALLRGVDANDRCSWCHYLSCVPTSKWSCHTEAAYCESNQLGNQLNVTCS 357

Query: 325  NNNKTRTYTLMNASSSQIQGLCSQLC 248
            +  K  TY + N +SSQIQ LCSQLC
Sbjct: 358  STGKFSTYFMENPTSSQIQQLCSQLC 383


>ref|XP_002309063.1| predicted protein [Populus trichocarpa] gi|222855039|gb|EEE92586.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  426 bits (1095), Expect = e-117
 Identities = 216/357 (60%), Positives = 246/357 (68%)
 Frame = -2

Query: 1315 SSAPTPIQNQIVYREIKHFKKWVPWLIPSFVVANIIMFVITMYVNNCPKNSVSCVAGFLG 1136
            SS+P+P+    V+ + + FKKW PWLIP+FV+AN++MF+ITMYVNNCPKN VSC+A FLG
Sbjct: 15   SSSPSPV----VHGKARPFKKWWPWLIPAFVIANVVMFIITMYVNNCPKNYVSCIARFLG 70

Query: 1135 RLSFQPFKENPLLGPSSSALEKVGALDVSKVVDKHQGWRLITCMWLHGGVFHLLANMLSL 956
            R SFQPFKENPLLGPSS +L+K+GALDV KVVD HQ WRLITC WLHGGVFHLLANMLSL
Sbjct: 71   RFSFQPFKENPLLGPSSISLQKMGALDVQKVVDGHQWWRLITCNWLHGGVFHLLANMLSL 130

Query: 955  VVIGIRLEQEFGFVRIGLLYVISGFGGSLLSALFIQSNISVXXXXXXXXXXXXXXSELIT 776
            +VIGIRLEQEFGFV++GLLYVISGFGGSLLSALFIQSNISV              SELIT
Sbjct: 131  LVIGIRLEQEFGFVKVGLLYVISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELIT 190

Query: 775  NWTIYANKXXXXXXXXXXXXXXXXXXXLPNVDNFAHXXXXXXXXXXXXXXLIRPQFGWVN 596
            NWTIYAN+                   LP+VDNFAH              LIRPQFGW +
Sbjct: 191  NWTIYANQVAAFITLVVIIAVNLALGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWFS 250

Query: 595  QRYAPPGYSATVAKPKFMMYQRIXXXXXXXXXXXXXXXXXXXXLRGVDLNDHCSWCHYMS 416
            QR AP GY     K KF  YQ                      LRGVD N+HCSWCHY+S
Sbjct: 251  QRRAPLGYIPASVKSKFKTYQCALWIISLILLIAGLTIGMVLLLRGVDANEHCSWCHYLS 310

Query: 415  CVPTSRWSCNTRPVSCMSEQTGNQLSLTCSNNNKTRTYTLMNASSSQIQGLCSQLCR 245
            CVPT +WSC T P  C+S Q GNQL+LTCS+N K+  Y L  A+SSQIQGLC+ LCR
Sbjct: 311  CVPTGKWSCKTEPAYCLSTQIGNQLNLTCSSNGKSSVYILPGATSSQIQGLCTGLCR 367


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