BLASTX nr result

ID: Panax21_contig00017313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017313
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    95   5e-18
ref|XP_003524251.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    94   9e-18
ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    94   9e-18
ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...    94   9e-18

>ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|222845815|gb|EEE83362.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/62 (79%), Positives = 50/62 (80%), Gaps = 6/62 (9%)
 Frame = +2

Query: 128 VTRSVDTEHGQLSPQERKTVE*I------PFVNHLVGVGDGPWDMMREFDDNIPARAFDN 289
           VTRSVDTEHGQLSPQE+KTVE I      P    LVGVGDGPWDMMREFDDNIPAR FDN
Sbjct: 166 VTRSVDTEHGQLSPQEQKTVEAIVQASKLPLSIILVGVGDGPWDMMREFDDNIPARDFDN 225

Query: 290 FQ 295
           FQ
Sbjct: 226 FQ 227


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|296087586|emb|CBI34842.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/62 (79%), Positives = 50/62 (80%), Gaps = 6/62 (9%)
 Frame = +2

Query: 128 VTRSVDTEHGQLSPQERKTVE*I------PFVNHLVGVGDGPWDMMREFDDNIPARAFDN 289
           VTRSVDT HGQLSPQE+KTVE I      P    LVGVGDGPWDMMREFDDNIPARAFDN
Sbjct: 249 VTRSVDTAHGQLSPQEQKTVEAIVEASKLPLSIILVGVGDGPWDMMREFDDNIPARAFDN 308

Query: 290 FQ 295
           FQ
Sbjct: 309 FQ 310


>ref|XP_003524251.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 460

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 6/62 (9%)
 Frame = +2

Query: 128 VTRSVDTEHGQLSPQERKTVE*I------PFVNHLVGVGDGPWDMMREFDDNIPARAFDN 289
           VTRSVDT+HGQLSPQE KT++ I      P    LVGVGDGPWDMMREFDDNIPARAFDN
Sbjct: 254 VTRSVDTQHGQLSPQEEKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDN 313

Query: 290 FQ 295
           FQ
Sbjct: 314 FQ 315


>ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|297733667|emb|CBI14914.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/62 (75%), Positives = 51/62 (82%), Gaps = 6/62 (9%)
 Frame = +2

Query: 128 VTRSVDTEHGQLSPQERKTVE*I------PFVNHLVGVGDGPWDMMREFDDNIPARAFDN 289
           VTRSVDTEHGQLSPQE++TVE I      P    LVGVGDGPWDMM+EFDDN+PARAFDN
Sbjct: 224 VTRSVDTEHGQLSPQEKRTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNMPARAFDN 283

Query: 290 FQ 295
           FQ
Sbjct: 284 FQ 285


>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
           copine, putative [Ricinus communis]
          Length = 433

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/62 (75%), Positives = 51/62 (82%), Gaps = 6/62 (9%)
 Frame = +2

Query: 128 VTRSVDTEHGQLSPQERKTVE*I------PFVNHLVGVGDGPWDMMREFDDNIPARAFDN 289
           VTRSVDT+HGQLSPQE++TVE I      P    LVGVGDGPWDMM+EFDDNIPARAFDN
Sbjct: 221 VTRSVDTQHGQLSPQEKRTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDN 280

Query: 290 FQ 295
           FQ
Sbjct: 281 FQ 282


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