BLASTX nr result

ID: Panax21_contig00017292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017292
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001120721.1| filamentation temperature-sensitive H 2B [Ze...   317   9e-85
gb|AFW87710.1| filamentation temperature-sensitive H 2A isoform ...   315   3e-84
ref|NP_001120720.1| LOC100147734 [Zea mays] gi|166093207|gb|ABY8...   315   3e-84
sp|Q655S1.1|FTSH2_ORYSJ RecName: Full=ATP-dependent zinc metallo...   315   4e-84
dbj|BAD45447.1| putative chloroplast protease [Oryza sativa Japo...   315   4e-84

>ref|NP_001120721.1| filamentation temperature-sensitive H 2B [Zea mays]
           gi|166093209|gb|ABY82590.1| filamentation
           temperature-sensitive H 2B [Zea mays]
           gi|166093213|gb|ABY82592.1| filamentation
           temperature-sensitive H 2B [Zea mays]
           gi|413943403|gb|AFW76052.1| filamentation
           temperature-sensitive H 2B isoform 1 [Zea mays]
           gi|413943404|gb|AFW76053.1| filamentation
           temperature-sensitive H 2B isoform 2 [Zea mays]
          Length = 677

 Score =  317 bits (812), Expect = 9e-85
 Identities = 166/194 (85%), Positives = 169/194 (87%)
 Frame = +1

Query: 1   GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 180
           GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID
Sbjct: 257 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 316

Query: 181 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 360
           AV           NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD
Sbjct: 317 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 376

Query: 361 RQVSVDVPDVRGRTEILKVHGSNKKFDADVSLDVVAMRTPGFSGXXXXXXXXXXXXXXGR 540
           RQVSVDVPDVRGRTEILKVHGSNKKFD+DVSLDV+AMRTPGFSG              GR
Sbjct: 377 RQVSVDVPDVRGRTEILKVHGSNKKFDSDVSLDVIAMRTPGFSGADLANLLNEAAILAGR 436

Query: 541 RGKTAISSKEIDDS 582
           RG+TAISSKEIDDS
Sbjct: 437 RGRTAISSKEIDDS 450


>gb|AFW87710.1| filamentation temperature-sensitive H 2A isoform 1 [Zea mays]
           gi|413955062|gb|AFW87711.1| filamentation
           temperature-sensitive H 2A isoform 2 [Zea mays]
           gi|413955063|gb|AFW87712.1| filamentation
           temperature-sensitive H 2A isoform 3 [Zea mays]
          Length = 677

 Score =  315 bits (808), Expect = 3e-84
 Identities = 165/194 (85%), Positives = 168/194 (86%)
 Frame = +1

Query: 1   GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 180
           GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID
Sbjct: 257 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 316

Query: 181 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 360
           AV           NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD
Sbjct: 317 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 376

Query: 361 RQVSVDVPDVRGRTEILKVHGSNKKFDADVSLDVVAMRTPGFSGXXXXXXXXXXXXXXGR 540
           RQVSVDVPDVRGRTEILKVHG NKKFD+DVSLDV+AMRTPGFSG              GR
Sbjct: 377 RQVSVDVPDVRGRTEILKVHGGNKKFDSDVSLDVIAMRTPGFSGADLANLLNEAAILAGR 436

Query: 541 RGKTAISSKEIDDS 582
           RG+TAISSKEIDDS
Sbjct: 437 RGRTAISSKEIDDS 450


>ref|NP_001120720.1| LOC100147734 [Zea mays] gi|166093207|gb|ABY82589.1| filamentation
           temperature-sensitive H 2A [Zea mays]
           gi|166093211|gb|ABY82591.1| filamentation
           temperature-sensitive H 2A [Zea mays]
          Length = 677

 Score =  315 bits (808), Expect = 3e-84
 Identities = 165/194 (85%), Positives = 168/194 (86%)
 Frame = +1

Query: 1   GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 180
           GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID
Sbjct: 257 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 316

Query: 181 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 360
           AV           NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD
Sbjct: 317 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 376

Query: 361 RQVSVDVPDVRGRTEILKVHGSNKKFDADVSLDVVAMRTPGFSGXXXXXXXXXXXXXXGR 540
           RQVSVDVPDVRGRTEILKVHG NKKFD+DVSLDV+AMRTPGFSG              GR
Sbjct: 377 RQVSVDVPDVRGRTEILKVHGGNKKFDSDVSLDVIAMRTPGFSGADLANLLNEAAILAGR 436

Query: 541 RGKTAISSKEIDDS 582
           RG+TAISSKEIDDS
Sbjct: 437 RGRTAISSKEIDDS 450


>sp|Q655S1.1|FTSH2_ORYSJ RecName: Full=ATP-dependent zinc metalloprotease FTSH 2,
           chloroplastic; Short=OsFTSH2; Flags: Precursor
           gi|52075838|dbj|BAD45446.1| putative FtsH-like protein
           Pftf precursor [Oryza sativa Japonica Group]
           gi|125556417|gb|EAZ02023.1| hypothetical protein
           OsI_24055 [Oryza sativa Indica Group]
           gi|125598182|gb|EAZ37962.1| hypothetical protein
           OsJ_22309 [Oryza sativa Japonica Group]
          Length = 676

 Score =  315 bits (807), Expect = 4e-84
 Identities = 165/194 (85%), Positives = 168/194 (86%)
 Frame = +1

Query: 1   GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 180
           GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID
Sbjct: 257 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 316

Query: 181 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 360
           AV           NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD
Sbjct: 317 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 376

Query: 361 RQVSVDVPDVRGRTEILKVHGSNKKFDADVSLDVVAMRTPGFSGXXXXXXXXXXXXXXGR 540
           RQVSVDVPDVRGRTEILKVHGSNKKFD DVSL+V+AMRTPGFSG              GR
Sbjct: 377 RQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGR 436

Query: 541 RGKTAISSKEIDDS 582
           RG+TAISSKEIDDS
Sbjct: 437 RGRTAISSKEIDDS 450


>dbj|BAD45447.1| putative chloroplast protease [Oryza sativa Japonica Group]
          Length = 472

 Score =  315 bits (807), Expect = 4e-84
 Identities = 165/194 (85%), Positives = 168/194 (86%)
 Frame = +1

Query: 1   GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 180
           GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID
Sbjct: 53  GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 112

Query: 181 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 360
           AV           NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD
Sbjct: 113 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 172

Query: 361 RQVSVDVPDVRGRTEILKVHGSNKKFDADVSLDVVAMRTPGFSGXXXXXXXXXXXXXXGR 540
           RQVSVDVPDVRGRTEILKVHGSNKKFD DVSL+V+AMRTPGFSG              GR
Sbjct: 173 RQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGR 232

Query: 541 RGKTAISSKEIDDS 582
           RG+TAISSKEIDDS
Sbjct: 233 RGRTAISSKEIDDS 246


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