BLASTX nr result

ID: Panax21_contig00017281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017281
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   736   0.0  
emb|CBI35690.3| unnamed protein product [Vitis vinifera]              736   0.0  
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   733   0.0  
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   699   0.0  
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   692   0.0  

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
            [Vitis vinifera]
          Length = 860

 Score =  736 bits (1899), Expect = 0.0
 Identities = 365/464 (78%), Positives = 402/464 (86%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1393 QRVSGMLAEVKRYQDDKIILKQYAENDQIVENGKVIKSQPEVVPALSDNHQTIVRPLIRL 1214
            QR+SGM AEV+RYQDD+ ILKQYAENDQ+VENGK+ K+QPE+VPALSDNHQ IVRPLIRL
Sbjct: 172  QRISGMAAEVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRL 231

Query: 1213 QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR 1034
            Q+KNIILTRINPLIRDTSVLVRLRPAWEDLRSYL ARGRKRFEVYVCTMAERDYALEMWR
Sbjct: 232  QEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 291

Query: 1033 LLDPESKLINMKELLDRIVCVKSGLKKSLFSVFQDGNCHPKMVLVIDDRLKVWDEKDQSR 854
            LLDPES LIN KELLDRIVCVKSG +KSLF+VFQDG CHPKM LVIDDRLKVWDEKDQ R
Sbjct: 292  LLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPR 351

Query: 853  VHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRIPEVKYEDDVK 674
            VHVVPAFAPYYAPQAEANNAI VLCVARNVACNVRGGFFKEFDEGLLQRIPE+ YEDD+K
Sbjct: 352  VHVVPAFAPYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIK 411

Query: 673  DIPFPPDVSNYLISEDDASALNGNKDSLSFDGMADVEVERRLKDATSASSTVPAVVTHVD 494
            DI   PDVSNYL+SEDDAS  NGN+D   FDGMADVEVER+LKDA SA    P+ VT +D
Sbjct: 412  DIRSAPDVSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDAISA----PSTVTSLD 467

Query: 493  PRLVSPLQYIVTPSISI-PVPAMQGPVTPFPSKTLPQVTSVLKPLNQVGLPEVSLQNSPA 317
            PRL  PLQ+ V  S  + P PA QG + PF +K  PQ  S++KPL     PE ++Q+SPA
Sbjct: 468  PRLSPPLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPL----APEPTMQSSPA 523

Query: 316  REEGEVPESELDPDTRRRLLILQHGQDVRDHSLSETQFPIRPPLQVSAPQVQGRGSWFPV 137
            REEGEVPESELDPDTRRRLLILQHGQD R+H+ S+  FP+RPP+QVS P+VQ RGSWFP 
Sbjct: 524  REEGEVPESELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPA 583

Query: 136  EEEMSPRQLNRAVPPKEFPLQSESLHIEKHRPHHPPFLHKLESS 5
            +EEMSPRQLNRAV PKEFPL S+++HIEKHRPHHP F HK+ESS
Sbjct: 584  DEEMSPRQLNRAV-PKEFPLDSDTMHIEKHRPHHPSFFHKVESS 626


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  736 bits (1899), Expect = 0.0
 Identities = 365/464 (78%), Positives = 402/464 (86%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1393 QRVSGMLAEVKRYQDDKIILKQYAENDQIVENGKVIKSQPEVVPALSDNHQTIVRPLIRL 1214
            QR+SGM AEV+RYQDD+ ILKQYAENDQ+VENGK+ K+QPE+VPALSDNHQ IVRPLIRL
Sbjct: 172  QRISGMAAEVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRL 231

Query: 1213 QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR 1034
            Q+KNIILTRINPLIRDTSVLVRLRPAWEDLRSYL ARGRKRFEVYVCTMAERDYALEMWR
Sbjct: 232  QEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 291

Query: 1033 LLDPESKLINMKELLDRIVCVKSGLKKSLFSVFQDGNCHPKMVLVIDDRLKVWDEKDQSR 854
            LLDPES LIN KELLDRIVCVKSG +KSLF+VFQDG CHPKM LVIDDRLKVWDEKDQ R
Sbjct: 292  LLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPR 351

Query: 853  VHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRIPEVKYEDDVK 674
            VHVVPAFAPYYAPQAEANNAI VLCVARNVACNVRGGFFKEFDEGLLQRIPE+ YEDD+K
Sbjct: 352  VHVVPAFAPYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIK 411

Query: 673  DIPFPPDVSNYLISEDDASALNGNKDSLSFDGMADVEVERRLKDATSASSTVPAVVTHVD 494
            DI   PDVSNYL+SEDDAS  NGN+D   FDGMADVEVER+LKDA SA    P+ VT +D
Sbjct: 412  DIRSAPDVSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDAISA----PSTVTSLD 467

Query: 493  PRLVSPLQYIVTPSISI-PVPAMQGPVTPFPSKTLPQVTSVLKPLNQVGLPEVSLQNSPA 317
            PRL  PLQ+ V  S  + P PA QG + PF +K  PQ  S++KPL     PE ++Q+SPA
Sbjct: 468  PRLSPPLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPL----APEPTMQSSPA 523

Query: 316  REEGEVPESELDPDTRRRLLILQHGQDVRDHSLSETQFPIRPPLQVSAPQVQGRGSWFPV 137
            REEGEVPESELDPDTRRRLLILQHGQD R+H+ S+  FP+RPP+QVS P+VQ RGSWFP 
Sbjct: 524  REEGEVPESELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPA 583

Query: 136  EEEMSPRQLNRAVPPKEFPLQSESLHIEKHRPHHPPFLHKLESS 5
            +EEMSPRQLNRAV PKEFPL S+++HIEKHRPHHP F HK+ESS
Sbjct: 584  DEEMSPRQLNRAV-PKEFPLDSDTMHIEKHRPHHPSFFHKVESS 626


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  733 bits (1891), Expect = 0.0
 Identities = 364/466 (78%), Positives = 403/466 (86%), Gaps = 2/466 (0%)
 Frame = -1

Query: 1393 QRVSGMLAEVKRYQDDKIILKQYAENDQIVENGKVIKSQPEVVPALSDNHQTIVRPLIRL 1214
            QR+SGML+EVKRYQDDK ILKQY +NDQ+VENG+VIK+Q EVVPALSDNHQTIVRPLIRL
Sbjct: 194  QRISGMLSEVKRYQDDKTILKQYVDNDQVVENGRVIKTQFEVVPALSDNHQTIVRPLIRL 253

Query: 1213 QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR 1034
            Q++NIILTRINP IRDTSVLVRLRPAWE+LRSYL ARGRKRFEVYVCTMAERDYALEMWR
Sbjct: 254  QERNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWR 313

Query: 1033 LLDPESKLINMKELLDRIVCVKSGLKKSLFSVFQDGNCHPKMVLVIDDRLKVWDEKDQSR 854
            LLDPES LIN KELLDRIVCVKSGL+KSLF+VFQDG CHPKM LVIDDRLKVWDEKDQ R
Sbjct: 314  LLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPR 373

Query: 853  VHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRIPEVKYEDDVK 674
            VHVVPAFAPYYAPQAEANNA+PVLCVARNVACNVRGGFFKEFDEGLLQRIPE+ +EDD+ 
Sbjct: 374  VHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQRIPEISFEDDMN 433

Query: 673  DIPFPPDVSNYLISEDDASALNGNKDSLSFDGMADVEVERRLKDATSASSTVPAVVTHVD 494
            DIP PPDVSNYL+ EDDA   NGN+D LSFDGMAD EVE+RLK+A S SS  P+ V ++D
Sbjct: 434  DIPSPPDVSNYLVPEDDAFTSNGNRDPLSFDGMADAEVEKRLKEAISISSAFPSTVANLD 493

Query: 493  PRLVSPLQYIVTPSISIPVPAMQGPVTPFPSKTLPQVTSVLKPLNQVGLPEVSLQNSPAR 314
             RLV PLQY +  S SIPVP  Q  V  FPS  LPQ   ++KPL QV   E SLQ+SPAR
Sbjct: 494  ARLVPPLQYTMASSSSIPVPTSQPAVVTFPSMQLPQAAPLVKPLGQVVPSEPSLQSSPAR 553

Query: 313  EEGEVPESELDPDTRRRLLILQHGQDVRDHSLSETQFPIRP--PLQVSAPQVQGRGSWFP 140
            EEGEVPESELDPDTRRRLLILQHGQD+RD + SE+ FP+RP   +QVS P+VQ RG+W P
Sbjct: 554  EEGEVPESELDPDTRRRLLILQHGQDLRDPAPSESPFPVRPSNSMQVSVPRVQSRGNWVP 613

Query: 139  VEEEMSPRQLNRAVPPKEFPLQSESLHIEKHRPHHPPFLHKLESSI 2
            VEEEMSPRQLNRAV  +EFP+ +E +HI+KHRPHHP F  K+ESSI
Sbjct: 614  VEEEMSPRQLNRAV-TREFPMDTEPMHIDKHRPHHPSFFPKVESSI 658


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  699 bits (1804), Expect = 0.0
 Identities = 348/465 (74%), Positives = 387/465 (83%), Gaps = 1/465 (0%)
 Frame = -1

Query: 1393 QRVSGMLAEVKRYQDDKIILKQYAENDQIVENGKVIKSQPEVVPALSDNHQTIVRPLIRL 1214
            QR+SGM AEVKRYQDDK ILKQYAENDQ+V+NG+VIK Q E+VPALSD+HQ IVRPLIRL
Sbjct: 171  QRISGMQAEVKRYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRL 230

Query: 1213 QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR 1034
            QDKNIILTRINP IRDTSVLVRLRPAWEDLRSYL ARGRKRFEVYVCTMAERDYALEMWR
Sbjct: 231  QDKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 290

Query: 1033 LLDPESKLINMKELLDRIVCVKSGLKKSLFSVFQDGNCHPKMVLVIDDRLKVWDEKDQSR 854
            LLDP+S LIN KELL RIVCVKSGLKKSLF+VFQDG CHPKM LVIDDRLKVWDEKDQ R
Sbjct: 291  LLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPR 350

Query: 853  VHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRIPEVKYEDDVK 674
            VHVVPAFAPYYAPQAEA+N IPVLCVARNVACNVRGGFFK+FD+GLLQ+IP++ YEDD+K
Sbjct: 351  VHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIK 410

Query: 673  DIPFPPDVSNYLISEDDASALNGNKDSLSFDGMADVEVERRLKDATSASSTVPAVVTHVD 494
            DIP PPDVSNYL+SEDD S  NG++D   FDGMAD EVER+LKDA SA+ST+P    ++D
Sbjct: 411  DIPSPPDVSNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLD 470

Query: 493  PRLVSPLQYIVTPSISIPVPAMQGPVTPFPSKTLPQVTSVLKPLNQVGLPEVSLQNSPAR 314
            PRL S LQY + PS S+P P  Q  + PFP    PQ  +++KP+ Q    E SL +SPAR
Sbjct: 471  PRLTS-LQYTMVPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSEPSLHSSPAR 529

Query: 313  EEGEVPESELDPDTRRRLLILQHGQDVRDHSLSETQFPIRPPLQVSAPQV-QGRGSWFPV 137
            EEGEVPESELDPDTRRRLLILQHGQD RDH+ +E  FP+R P+Q SAP V   RG WFP 
Sbjct: 530  EEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPA 589

Query: 136  EEEMSPRQLNRAVPPKEFPLQSESLHIEKHRPHHPPFLHKLESSI 2
            EEE+  + LNR V PKEFP+ S  L I K RPHHP F  K+ESSI
Sbjct: 590  EEEIGSQPLNRVV-PKEFPVDSGPLGIAKPRPHHPSFFSKVESSI 633


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  692 bits (1786), Expect = 0.0
 Identities = 344/465 (73%), Positives = 388/465 (83%), Gaps = 1/465 (0%)
 Frame = -1

Query: 1393 QRVSGMLAEVKRYQDDKIILKQYAENDQIVENGKVIKSQPEVVPALSDNHQTIVRPLIRL 1214
            QR+SGM AEVKRY DDK ILKQYAENDQ+V+NG+VIK Q E+VPALSD+HQ IVRPLIRL
Sbjct: 177  QRISGMQAEVKRYLDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRL 236

Query: 1213 QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR 1034
            QDKNIILTRINP IRDTSVLVRLRPAWEDLRSYL ARGRKRFEVYVCTMAERDYALEMWR
Sbjct: 237  QDKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 296

Query: 1033 LLDPESKLINMKELLDRIVCVKSGLKKSLFSVFQDGNCHPKMVLVIDDRLKVWDEKDQSR 854
            LLDP+S LIN KELL RIVCVKSGLKKSLF+VFQDG+C PKM LVIDDRLKVWDE+DQ R
Sbjct: 297  LLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCDPKMALVIDDRLKVWDERDQPR 356

Query: 853  VHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKEFDEGLLQRIPEVKYEDDVK 674
            VHVVPAFAPYYAPQAEA+N IPVLCVARNVACNVRGGFFK+FD+GLLQ+IP++ YEDD+K
Sbjct: 357  VHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIK 416

Query: 673  DIPFPPDVSNYLISEDDASALNGNKDSLSFDGMADVEVERRLKDATSASSTVPAVVTHVD 494
            D+P PPDVSNYL+SEDD S  NGN+D   FDGMAD EVER+LKDA +A+ST P    ++D
Sbjct: 417  DVPSPPDVSNYLVSEDDGSISNGNRDPFLFDGMADAEVERKLKDALAAASTFPVTTANLD 476

Query: 493  PRLVSPLQYIVTPSISIPVPAMQGPVTPFPSKTLPQVTSVLKPLNQVGLPEVSLQNSPAR 314
            PRL S LQY + PS S+P P  Q  + PFP    PQ  +++KP+ Q    + SL +SPAR
Sbjct: 477  PRLTS-LQYTMVPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSDPSLHSSPAR 535

Query: 313  EEGEVPESELDPDTRRRLLILQHGQDVRDHSLSETQFPIRPPLQVSAPQV-QGRGSWFPV 137
            EEGEVPESELDPDTRRRLLILQHGQD RDH+ +E  FP+R P+Q SAP+V   RG WFPV
Sbjct: 536  EEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQASAPRVPSSRGVWFPV 595

Query: 136  EEEMSPRQLNRAVPPKEFPLQSESLHIEKHRPHHPPFLHKLESSI 2
            EEE+  + LNR V PKEFP+ S  L IEK R HHP F +K+ESSI
Sbjct: 596  EEEIGSQPLNRVV-PKEFPVDSGPLGIEKPRLHHPSFFNKVESSI 639


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