BLASTX nr result

ID: Panax21_contig00017270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017270
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]   114   1e-23
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    93   4e-17
emb|CBI16005.3| unnamed protein product [Vitis vinifera]               90   3e-16
ref|XP_002520430.1| conserved hypothetical protein [Ricinus comm...    87   3e-15
ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]
          Length = 603

 Score =  114 bits (285), Expect = 1e-23
 Identities = 76/177 (42%), Positives = 97/177 (54%), Gaps = 14/177 (7%)
 Frame = -2

Query: 495 MTTESHPKPRPRTRSRCNSACYRHSSEPFTGFCALCLRERLAXXXXXXXXXXXXXTYAFV 316
           MT E HP  R        S C+RH +EPFTG CA CLR+RLA               +  
Sbjct: 1   MTLEPHPHHRRL------STCHRHPAEPFTGVCASCLRDRLA-----GFDPATRLEISVS 49

Query: 315 PSVDNIGGA-------GSNIRLELRRSKSVSVGKCDA--SSSEPRRFSCDVRGKNTLSHL 163
           P V++ GG         ++  LE RR KS+S GKC+    SSE RR SCDV  ++TL  L
Sbjct: 50  PRVNDSGGVPLQRVANRASCPLEFRRCKSLSAGKCEVLPGSSEQRRKSCDVGVRSTLCDL 109

Query: 162 FNIDDESKGLNRE-IKVESKSLGFSRIK----ELRSENDNGEEVRVSDDVLVQNVTV 7
           F +DDE  G NRE  +VES++LGF RI     E R E +N EE+R  ++VL  +V V
Sbjct: 110 FTLDDERNGSNREKFQVESRNLGFQRITAPVLESREEEENEEEIRGFEEVLASDVNV 166


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 60/143 (41%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
 Frame = -2

Query: 441 SACYRHSSEPFTGFCALCLRERLAXXXXXXXXXXXXXTYAFVPSVDNIGGAGSNIRLELR 262
           S C+RH S+P TGFCA CLRERLA                  P  +N   A      ELR
Sbjct: 13  STCHRHPSKPVTGFCASCLRERLAGIDPDTQHES--------PVQNNHSSA------ELR 58

Query: 261 RSKSVSVGKCDAS----SSEPRRFSCDVRGKNTLSHLFNIDDESKGLNREIKVESKSLGF 94
           RSKS S  KC+A     S    R SCDVR  N+LS LF  +D+ +  NRE+++ES++LGF
Sbjct: 59  RSKSHSAAKCEAGGIGQSEVQHRKSCDVRSGNSLSDLFCREDKPRCTNREVEIESENLGF 118

Query: 93  SRIKELRSENDNGEEVRVSDDVL 25
               ELR    NG + R S+ ++
Sbjct: 119 ----ELREVVGNGRQFRASEGII 137


>emb|CBI16005.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 58/133 (43%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
 Frame = -2

Query: 495 MTTESHPKPRPRTRSRCNSACYRHSSEPFTGFCALCLRERLAXXXXXXXXXXXXXTYAFV 316
           MT E HP  R        S C+RH +EPFTG CA CLR+RLA               +  
Sbjct: 1   MTLEPHPHHRRL------STCHRHPAEPFTGVCASCLRDRLA-----GFDPATRLEISVS 49

Query: 315 PSVDNIGGA-------GSNIRLELRRSKSVSVGKCDA--SSSEPRRFSCDVRGKNTLSHL 163
           P V++ GG         ++  LE RR KS+S GKC+A   SSE RR SCDV  ++TL  L
Sbjct: 50  PRVNDSGGVPLQRVANRASCPLEFRRCKSLSAGKCEALPGSSEQRRKSCDVGVRSTLCDL 109

Query: 162 FNIDDESKGLNRE 124
           F +DDE  G NRE
Sbjct: 110 FTLDDERNGSNRE 122


>ref|XP_002520430.1| conserved hypothetical protein [Ricinus communis]
           gi|223540272|gb|EEF41843.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 58/158 (36%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
 Frame = -2

Query: 471 PRPRTRSRCNSACYRHSSEPFTGFCALCLRERLAXXXXXXXXXXXXXTYAFVPSVDNIGG 292
           P+P    R +S C+RH + P TGFCA CLRERLA                          
Sbjct: 5   PKPLHHHR-HSTCHRHPTRPITGFCASCLRERLAGIDPDTHQETPI-------------- 49

Query: 291 AGSNIRLELRRSKS--------------VSVGKCDASSSEPRRFSCDVRGKNTLSHLFNI 154
             +++  ELRRSKS               S    + +S +PRR SCDVR +NTLS LFN+
Sbjct: 50  --THLAAELRRSKSYSCSSNPNNNASSTTSTSTTNTASDQPRRKSCDVRARNTLSDLFNL 107

Query: 153 DDESK-GLNREIKVESKSLGFSRIKELRSENDNGEEVR 43
           DD+ +  LN ++KVE+  L      EL+ E +N  E+R
Sbjct: 108 DDKKRFSLNHKLKVENLGL------ELKEEEENEVEIR 139


>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 57/157 (36%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
 Frame = -2

Query: 471 PRPRTRSRCNSACYRHSSEPFTGFCALCLRERLAXXXXXXXXXXXXXTYAFVPSVDNIGG 292
           P+P      + +C+RH S+P TGFCA CLRERLA                          
Sbjct: 5   PQPHLPKHRHPSCHRHPSKPITGFCASCLRERLAGIDPDTHQETPV-------------- 50

Query: 291 AGSNIRLELRRSKSVSV-----------GKCDASSSEPRRFSCDVRG-KNTLSHLFNIDD 148
             +++  ELRRSKS S                A++SEPRR SCDV   +NTLS LF++DD
Sbjct: 51  --THLAAELRRSKSYSSTTTRNNPNNNNASTTATTSEPRRKSCDVGPFRNTLSDLFHVDD 108

Query: 147 ESKGLNREIKVESKSLGFSRIKELRSENDNGEEVRVS 37
           + +  + E     K+ GF    EL+ E + G E+RVS
Sbjct: 109 KRRSSSIE-----KTKGFDSGLELKEEENLG-EIRVS 139


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