BLASTX nr result
ID: Panax21_contig00017266
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017266
(723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino... 65 1e-08
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c... 65 1e-08
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-08
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-08
dbj|BAK02783.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
>ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
subunit 1, mitochondrial-like [Cucumis sativus]
Length = 635
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/102 (43%), Positives = 50/102 (49%)
Frame = +2
Query: 416 RWHMYDTVKGSDWLGKMIV*ELWVTIFLE*RWKNISTCIWWSKFGL*KRYEVMLFK*ILI 595
RWHMYDTVKGSDWLG + + I +GL + I
Sbjct: 109 RWHMYDTVKGSDWLGDQDAIQYMCR-------EAPKAVIELENYGL--PFSRTEDGKIYQ 159
Query: 596 FDF*RELFDFNFLHVVSLGGQAYHCACAADRTGHALLHTLHG 721
F + DF GGQAY CACAADRTGHALLHTL+G
Sbjct: 160 RAFGGQSLDFG------KGGQAYRCACAADRTGHALLHTLYG 195
Score = 61.2 bits (147), Expect = 2e-07
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 20/88 (22%)
Frame = +3
Query: 360 ITVQCGINVALGNMT*D---------IEGGT-----------CMTQLREVIG*VK*LFEN 479
+ Q GIN ALGNMT D ++G C + VI EN
Sbjct: 90 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIE-----LEN 144
Query: 480 YGLPSSWNEDGKIYQRAFGGQSLDFRKG 563
YGLP S EDGKIYQRAFGGQSLDF KG
Sbjct: 145 YGLPFSRTEDGKIYQRAFGGQSLDFGKG 172
>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
putative [Ricinus communis]
Length = 622
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/102 (43%), Positives = 50/102 (49%)
Frame = +2
Query: 416 RWHMYDTVKGSDWLGKMIV*ELWVTIFLE*RWKNISTCIWWSKFGL*KRYEVMLFK*ILI 595
RWHMYDTVKGSDWLG + + I +GL + I
Sbjct: 96 RWHMYDTVKGSDWLGDQDAIQYMCR-------EAPKAVIELENYGL--PFSRTEDGRIYQ 146
Query: 596 FDF*RELFDFNFLHVVSLGGQAYHCACAADRTGHALLHTLHG 721
F + DF GGQAY CACAADRTGHALLHTL+G
Sbjct: 147 RAFGGQSLDFG------KGGQAYRCACAADRTGHALLHTLYG 182
Score = 60.1 bits (144), Expect = 5e-07
Identities = 40/88 (45%), Positives = 45/88 (51%), Gaps = 20/88 (22%)
Frame = +3
Query: 360 ITVQCGINVALGNMT*D---------IEGGT-----------CMTQLREVIG*VK*LFEN 479
+ Q GIN ALGNMT D ++G C + VI EN
Sbjct: 77 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIE-----LEN 131
Query: 480 YGLPSSWNEDGKIYQRAFGGQSLDFRKG 563
YGLP S EDG+IYQRAFGGQSLDF KG
Sbjct: 132 YGLPFSRTEDGRIYQRAFGGQSLDFGKG 159
>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
predicted protein [Populus trichocarpa]
Length = 633
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/102 (43%), Positives = 50/102 (49%)
Frame = +2
Query: 416 RWHMYDTVKGSDWLGKMIV*ELWVTIFLE*RWKNISTCIWWSKFGL*KRYEVMLFK*ILI 595
RWHMYDTVKGSDWLG + + I +GL + I
Sbjct: 107 RWHMYDTVKGSDWLGDQDAIQYMCR-------EAPKAVIELENYGL--PFSRTEDGKIYQ 157
Query: 596 FDF*RELFDFNFLHVVSLGGQAYHCACAADRTGHALLHTLHG 721
F + DF GGQAY CACAADRTGHALLHTL+G
Sbjct: 158 RAFGGQSLDFG------KGGQAYRCACAADRTGHALLHTLYG 193
Score = 61.2 bits (147), Expect = 2e-07
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 20/88 (22%)
Frame = +3
Query: 360 ITVQCGINVALGNMT*D---------IEGGT-----------CMTQLREVIG*VK*LFEN 479
+ Q GIN ALGNMT D ++G C + VI EN
Sbjct: 88 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIE-----LEN 142
Query: 480 YGLPSSWNEDGKIYQRAFGGQSLDFRKG 563
YGLP S EDGKIYQRAFGGQSLDF KG
Sbjct: 143 YGLPFSRTEDGKIYQRAFGGQSLDFGKG 170
>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
predicted protein [Populus trichocarpa]
Length = 638
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/102 (43%), Positives = 50/102 (49%)
Frame = +2
Query: 416 RWHMYDTVKGSDWLGKMIV*ELWVTIFLE*RWKNISTCIWWSKFGL*KRYEVMLFK*ILI 595
RWHMYDTVKGSDWLG + + I +GL + I
Sbjct: 110 RWHMYDTVKGSDWLGDQDAIQYMCR-------EAPKAVIELENYGL--PFSRTEDGKIYQ 160
Query: 596 FDF*RELFDFNFLHVVSLGGQAYHCACAADRTGHALLHTLHG 721
F + DF GGQAY CACAADRTGHALLHTL+G
Sbjct: 161 RAFGGQSLDFG------KGGQAYRCACAADRTGHALLHTLYG 196
Score = 61.2 bits (147), Expect = 2e-07
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 20/88 (22%)
Frame = +3
Query: 360 ITVQCGINVALGNMT*D---------IEGGT-----------CMTQLREVIG*VK*LFEN 479
+ Q GIN ALGNMT D ++G C + VI EN
Sbjct: 91 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIE-----LEN 145
Query: 480 YGLPSSWNEDGKIYQRAFGGQSLDFRKG 563
YGLP S EDGKIYQRAFGGQSLDF KG
Sbjct: 146 YGLPFSRTEDGKIYQRAFGGQSLDFGKG 173
>dbj|BAK02783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 621
Score = 64.3 bits (155), Expect = 2e-08
Identities = 43/102 (42%), Positives = 50/102 (49%)
Frame = +2
Query: 416 RWHMYDTVKGSDWLGKMIV*ELWVTIFLE*RWKNISTCIWWSKFGL*KRYEVMLFK*ILI 595
RWHMYDTVKGSDWLG + + I +GL + I
Sbjct: 95 RWHMYDTVKGSDWLGDQDAIQYMCR-------EAPKAVIELENYGL--PFSRTEDGKIYQ 145
Query: 596 FDF*RELFDFNFLHVVSLGGQAYHCACAADRTGHALLHTLHG 721
F + DF GGQAY CACAADRTGHA+LHTL+G
Sbjct: 146 RAFGGQSLDFG------KGGQAYRCACAADRTGHAMLHTLYG 181
Score = 59.7 bits (143), Expect = 6e-07
Identities = 40/88 (45%), Positives = 45/88 (51%), Gaps = 20/88 (22%)
Frame = +3
Query: 360 ITVQCGINVALGNMT*D---------IEGGT-----------CMTQLREVIG*VK*LFEN 479
+ Q GIN ALGNM+ D ++G C + VI EN
Sbjct: 76 VAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIE-----LEN 130
Query: 480 YGLPSSWNEDGKIYQRAFGGQSLDFRKG 563
YGLP S EDGKIYQRAFGGQSLDF KG
Sbjct: 131 YGLPFSRTEDGKIYQRAFGGQSLDFGKG 158