BLASTX nr result

ID: Panax21_contig00017263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017263
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   243   2e-62
ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   237   8e-61
emb|CBI28264.3| unnamed protein product [Vitis vinifera]              237   8e-61
ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [S...   226   1e-57
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   226   2e-57

>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 993

 Score =  243 bits (619), Expect = 2e-62
 Identities = 119/159 (74%), Positives = 137/159 (86%)
 Frame = +3

Query: 3   GVAPRAKMNQQRARRFRTAKDAEIAEKQEEKLRRLFLMEGKQVLPKQESELSDSNIITPG 182
           GVAPRAKMNQQR+RRFR AKD EIAE +EE+LR+ + ++GKQVLPKQ SE+SDSNIITPG
Sbjct: 85  GVAPRAKMNQQRSRRFRNAKDTEIAEAEEERLRKEYEIQGKQVLPKQYSEVSDSNIITPG 144

Query: 183 TDFMYKLSKKLQGYIRLRINNNPGWKDIKVILSDANVPGEGEHKIMSFIRHQRTFPAYNP 362
           T+FM+ LS KLQ Y+   IN++P WK IKVILSDA+VPGEGEHKIMSFIR QR  P YNP
Sbjct: 145 TEFMFTLSIKLQEYMISNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNP 204

Query: 363 NTRHCVYGLDADLIMLVLATHEIHFSILREDVLAQEPNS 479
           NTRHC+YGLDADLIML LA+HE+HFSILRE VL Q+P S
Sbjct: 205 NTRHCLYGLDADLIMLALASHEVHFSILREVVLLQQPQS 243


>ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1072

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/156 (74%), Positives = 134/156 (85%)
 Frame = +3

Query: 3   GVAPRAKMNQQRARRFRTAKDAEIAEKQEEKLRRLFLMEGKQVLPKQESELSDSNIITPG 182
           GVAPRAKMNQQR RRF+TAKD EIAE +E++LRR F MEGK ++PKQES++SD NIITPG
Sbjct: 95  GVAPRAKMNQQRRRRFQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPG 154

Query: 183 TDFMYKLSKKLQGYIRLRINNNPGWKDIKVILSDANVPGEGEHKIMSFIRHQRTFPAYNP 362
           T FM+++SK LQ YI  R+ +  GWKD+KVILSD+NVPGEGEHKIMSFIR QR+ P YNP
Sbjct: 155 TVFMHEVSKALQQYICSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNP 214

Query: 363 NTRHCVYGLDADLIMLVLATHEIHFSILREDVLAQE 470
           NT HC+YGLDADLIML LATHE+HFSILREDVL  E
Sbjct: 215 NTLHCLYGLDADLIMLALATHEVHFSILREDVLTLE 250


>emb|CBI28264.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/156 (74%), Positives = 134/156 (85%)
 Frame = +3

Query: 3   GVAPRAKMNQQRARRFRTAKDAEIAEKQEEKLRRLFLMEGKQVLPKQESELSDSNIITPG 182
           GVAPRAKMNQQR RRF+TAKD EIAE +E++LRR F MEGK ++PKQES++SD NIITPG
Sbjct: 95  GVAPRAKMNQQRRRRFQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPG 154

Query: 183 TDFMYKLSKKLQGYIRLRINNNPGWKDIKVILSDANVPGEGEHKIMSFIRHQRTFPAYNP 362
           T FM+++SK LQ YI  R+ +  GWKD+KVILSD+NVPGEGEHKIMSFIR QR+ P YNP
Sbjct: 155 TVFMHEVSKALQQYICSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNP 214

Query: 363 NTRHCVYGLDADLIMLVLATHEIHFSILREDVLAQE 470
           NT HC+YGLDADLIML LATHE+HFSILREDVL  E
Sbjct: 215 NTLHCLYGLDADLIMLALATHEVHFSILREDVLTLE 250


>ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
           gi|241936155|gb|EES09300.1| hypothetical protein
           SORBIDRAFT_05g003580 [Sorghum bicolor]
          Length = 696

 Score =  226 bits (577), Expect = 1e-57
 Identities = 108/153 (70%), Positives = 132/153 (86%)
 Frame = +3

Query: 3   GVAPRAKMNQQRARRFRTAKDAEIAEKQEEKLRRLFLMEGKQVLPKQESELSDSNIITPG 182
           GVAPRAKMNQQR+RRF+ AKDA+ AE +E+ LR  F  EG++V P++ +E+SD N+ITPG
Sbjct: 114 GVAPRAKMNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGREVQPRETNEVSDPNVITPG 173

Query: 183 TDFMYKLSKKLQGYIRLRINNNPGWKDIKVILSDANVPGEGEHKIMSFIRHQRTFPAYNP 362
           T+FM KLSK L+ YIR R+N++PGWK IK ILSD+NVPGEGEHKIMSFIR QR+  +Y+P
Sbjct: 174 TEFMEKLSKALEYYIRSRLNSDPGWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDP 233

Query: 363 NTRHCVYGLDADLIMLVLATHEIHFSILREDVL 461
           NTRHC+YGLDADLIML LA+HE+HFSILREDVL
Sbjct: 234 NTRHCLYGLDADLIMLALASHELHFSILREDVL 266


>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/152 (72%), Positives = 128/152 (84%)
 Frame = +3

Query: 3   GVAPRAKMNQQRARRFRTAKDAEIAEKQEEKLRRLFLMEGKQVLPKQESELSDSNIITPG 182
           GVAPRAKMNQQR+RRFR AKDA  A  +EE+LR  F  EG+++ PKQ+S++ DSN+ITPG
Sbjct: 104 GVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPG 163

Query: 183 TDFMYKLSKKLQGYIRLRINNNPGWKDIKVILSDANVPGEGEHKIMSFIRHQRTFPAYNP 362
           T+FM  LS  LQ YI LR+NN+PGWK IKVILSDANVPGEGEHKIMS+IR QR  P ++P
Sbjct: 164 TEFMGVLSVALQYYIHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDP 223

Query: 363 NTRHCVYGLDADLIMLVLATHEIHFSILREDV 458
           NTRHC+YGLDADLIML LATHE+HFSILRE V
Sbjct: 224 NTRHCLYGLDADLIMLALATHEVHFSILREIV 255


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