BLASTX nr result

ID: Panax21_contig00017255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017255
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...   124   6e-27
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   120   9e-26
ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vi...   116   2e-24
ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, pa...   115   3e-24
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...   115   3e-24

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223541425|gb|EEF42975.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/104 (57%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 LQKLQAILNVDILKILKISYDLLQDDQDRNLFLDIACFFVGEDKSYIVTRLDKCGYFTEV 132
           LQKL+A+ +  I KIL++SYD L+DD D+NLFLDIACFF G +K+Y+++ L  C ++  V
Sbjct: 416 LQKLEAVPDSKIQKILRVSYDSLEDDHDKNLFLDIACFFTGMEKNYVISILQGCKFYAVV 475

Query: 131 GMQNLIEKSLLITGRG-KLEMHQLIQEMGREIVRQESPKDPGKR 3
           G+ NLI + LL    G KL +HQL+++MGREIVRQESP+DPGKR
Sbjct: 476 GINNLIGRCLLTINEGNKLIIHQLLRDMGREIVRQESPEDPGKR 519


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223543328|gb|EEF44860.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 1186

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 LQKLQAILNVDILKILKISYDLLQDDQDRNLFLDIACFFVGEDKSYIVTRLDKCGYFTEV 132
           L+KL+ + +  I  IL+IS+D LQDD D+ LFLDIACFF G D  Y+   LD CG++  +
Sbjct: 414 LEKLEKVADSKIQHILRISFDSLQDDHDKRLFLDIACFFTGMDIGYVFRILDGCGFYAVI 473

Query: 131 GMQNLIEKSLL-ITGRGKLEMHQLIQEMGREIVRQESPKDPGKR 3
           G+QNLI++ L+ I+ + KL MHQL+ +MGREIVRQESP DPGKR
Sbjct: 474 GIQNLIDRCLITISDKYKLMMHQLLGDMGREIVRQESPDDPGKR 517


>ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/103 (56%), Positives = 77/103 (74%)
 Frame = -3

Query: 311 LQKLQAILNVDILKILKISYDLLQDDQDRNLFLDIACFFVGEDKSYIVTRLDKCGYFTEV 132
           L+KL+ I N +I  +L+IS+D L D+Q +++F DIACFF G+DK Y++  L  C +F E+
Sbjct: 411 LEKLRRIPNKEIQDVLRISFDGLDDNQ-KDIFFDIACFFKGQDKDYVIKLLKSCDFFPEI 469

Query: 131 GMQNLIEKSLLITGRGKLEMHQLIQEMGREIVRQESPKDPGKR 3
           G++NLI+KSL+     KL MH LIQEMG EIVRQES KDPGKR
Sbjct: 470 GIRNLIDKSLVTISYNKLCMHDLIQEMGWEIVRQESMKDPGKR 512


>ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/103 (56%), Positives = 78/103 (75%)
 Frame = -3

Query: 311 LQKLQAILNVDILKILKISYDLLQDDQDRNLFLDIACFFVGEDKSYIVTRLDKCGYFTEV 132
           L+KL+ I N +I  +L+IS+D L D+Q +++FLDIACFF G+DK Y++  L  C +F E+
Sbjct: 416 LEKLRRIPNNEIQDVLRISFDGLDDNQ-KDIFLDIACFFKGQDKDYVIKLLKSCDFFPEI 474

Query: 131 GMQNLIEKSLLITGRGKLEMHQLIQEMGREIVRQESPKDPGKR 3
           G++NLI+KSL+     KL MH LIQ+MG EIVRQES KDPGKR
Sbjct: 475 GIRNLIDKSLVTISYNKLCMHDLIQKMGWEIVRQESIKDPGKR 517


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548234|gb|EEF49725.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/104 (57%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 LQKLQAILNVDILKILKISYDLLQDDQDRNLFLDIACFFVGEDKSYIVTRLDKCGYFTEV 132
           L+KL+AI +  I K L+ISYD LQDD+ +NLFL IACFF G DK Y+V  LD C  + +V
Sbjct: 404 LEKLKAIPHPKIQKSLQISYDSLQDDKYKNLFLHIACFFTGRDKDYVVKVLDGCELYAKV 463

Query: 131 GMQNLIEKSLL-ITGRGKLEMHQLIQEMGREIVRQESPKDPGKR 3
           G+QNLI++ L+ I    KL MH L+++MGREIVRQESP+ PG R
Sbjct: 464 GIQNLIDRHLVTINKDNKLMMHPLLRDMGREIVRQESPEHPGSR 507


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