BLASTX nr result

ID: Panax21_contig00017254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017254
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           112   3e-23
ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...   109   3e-22
ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...   109   3e-22
ref|XP_002517485.1| tyrosyl-tRNA synthetase, putative [Ricinus c...   109   3e-22
ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621...   106   2e-21

>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 141 LSSSRMNSEEKFSTLRSIWEECTTEDELRSVLTVKPQPIAVDRFEPSGRMHIAQGVVKAI 320
           +S+S+M+ EEKF  +RSI EEC  EDEL ++L  KPQP+  D FEPSGRMHIAQGV+KA+
Sbjct: 53  ISTSQMSLEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKAL 112

Query: 321 NVKRMISAGYKVKFWIADLFAQL 389
           NV ++ SAG KVK WIAD FAQL
Sbjct: 113 NVNKLTSAGCKVKIWIADWFAQL 135


>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
           sativus]
          Length = 387

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +3

Query: 144 SSSRMNSEEKFSTLRSIWEECTTEDELRSVLTVKPQPIAVDRFEPSGRMHIAQGVVKAIN 323
           SS++++ EEK+  +RS+ EEC  EDELR++L  KP+P+  D FEPSGRMHIAQGV+KAIN
Sbjct: 33  SSNQLSLEEKYQIVRSVGEECIQEDELRNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAIN 92

Query: 324 VKRMISAGYKVKFWIADLFAQL 389
           V ++ SAG +VK WIAD FAQL
Sbjct: 93  VNKLTSAGCRVKIWIADWFAQL 114


>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +3

Query: 144 SSSRMNSEEKFSTLRSIWEECTTEDELRSVLTVKPQPIAVDRFEPSGRMHIAQGVVKAIN 323
           SS++++ EEK+  +RS+ EEC  EDELR++L  KP+P+  D FEPSGRMHIAQGV+KAIN
Sbjct: 33  SSNQLSLEEKYQIVRSVGEECIQEDELRNLLDKKPEPVCYDGFEPSGRMHIAQGVMKAIN 92

Query: 324 VKRMISAGYKVKFWIADLFAQL 389
           V ++ SAG +VK WIAD FAQL
Sbjct: 93  VNKLTSAGCRVKIWIADWFAQL 114


>ref|XP_002517485.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
           gi|223543496|gb|EEF45027.1| tyrosyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 413

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/82 (65%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 SSSRMNSEEKFSTLRSIWEECTTEDELRSVLTVKPQPIAVDRFEPSGRMHIAQGVVKAIN 323
           SS  M+ EE+F  +R I EEC  EDEL ++LT KPQPI  D FEPSGRMHIAQGV+K IN
Sbjct: 27  SSQTMSPEERFQIVRGIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKTIN 86

Query: 324 VKRMISAGYKVKFWIADLFAQL 389
           V ++ SAG KVK WIAD FAQL
Sbjct: 87  VNKLTSAGCKVKIWIADWFAQL 108


>ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621482|gb|ACG32571.1|
           tyrosyl-tRNA synthetase [Zea mays]
          Length = 380

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/78 (67%), Positives = 58/78 (74%)
 Frame = +3

Query: 156 MNSEEKFSTLRSIWEECTTEDELRSVLTVKPQPIAVDRFEPSGRMHIAQGVVKAINVKRM 335
           M  +E+F  LR I EEC  EDELR +L  KP PI  D FEPSGRMHIAQGVVK INV +M
Sbjct: 32  MTLDERFEMLRGIGEECIQEDELRRLLENKPVPICYDGFEPSGRMHIAQGVVKTINVNKM 91

Query: 336 ISAGYKVKFWIADLFAQL 389
           +SAG KVK WIAD FAQL
Sbjct: 92  VSAGCKVKIWIADWFAQL 109


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