BLASTX nr result

ID: Panax21_contig00017242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017242
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530649.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266...    73   2e-11
emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]    73   2e-11
emb|CAN74652.1| hypothetical protein VITISV_022991 [Vitis vinifera]    59   4e-07

>ref|XP_002530649.1| conserved hypothetical protein [Ricinus communis]
            gi|223529782|gb|EEF31718.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2104

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = +2

Query: 71   AGKD-SSFAFEVSPFGGLYDGQTSKDWQSFPSVQVHKISTDVEGSPFTSGLTQKDLKTVP 247
            A KD SSF FEV P   L   + + +WQ+F +V+V K S +V+GS   SGL   D K   
Sbjct: 782  ASKDESSFTFEVIPLADL-PRKDANNWQTFSTVEVSKASLNVDGSTSNSGLGHLDPKISQ 840

Query: 248  EISHGSPQPPVQGITHAGAKGTPERKTRRGSGKSTARES 364
            + SHGSP+        +G+KG  ERK RRGSGK+TA+ES
Sbjct: 841  DPSHGSPKISDVATPRSGSKGNSERKPRRGSGKATAKES 879


>ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|222841713|gb|EEE79260.1|
            predicted protein [Populus trichocarpa]
          Length = 2105

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/121 (38%), Positives = 61/121 (50%)
 Frame = +2

Query: 2    VDNVQHSRGTCDADGKVKSVSLHAGKDSSFAFEVSPFGGLYDGQTSKDWQSFPSVQVHKI 181
            VD+      +C  D K    S     + SF FEVSP   +        WQSF ++   K+
Sbjct: 770  VDSNASKALSCSQDPKQNDASKD---ERSFTFEVSPLANMPLKSADNKWQSFFNIPATKV 826

Query: 182  STDVEGSPFTSGLTQKDLKTVPEISHGSPQPPVQGITHAGAKGTPERKTRRGSGKSTARE 361
            S  V  SP  SG+ Q D K   + SHGSP+         G+KGT ERKTRR SGK++ +E
Sbjct: 827  SPIVNASPSASGVVQIDPKIAQDPSHGSPKVSDVATVRTGSKGTSERKTRRSSGKASGKE 886

Query: 362  S 364
            S
Sbjct: 887  S 887


>ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266068 [Vitis vinifera]
          Length = 2292

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/95 (48%), Positives = 56/95 (58%)
 Frame = +2

Query: 80   DSSFAFEVSPFGGLYDGQTSKDWQSFPSVQVHKISTDVEGSPFTSGLTQKDLKTVPEISH 259
            + SF+FEV     L + +  K WQ F S Q  K S  VEGSP TS L Q D K   EIS 
Sbjct: 956  ERSFSFEVGALADLSEREAGKCWQPF-STQACKTSVIVEGSPSTSVLGQMDPKMAQEISR 1014

Query: 260  GSPQPPVQGITHAGAKGTPERKTRRGSGKSTARES 364
            GSP+    GI    +KGT ERKT+R SGK+T +E+
Sbjct: 1015 GSPRAS-GGIASGSSKGT-ERKTKRASGKATGKET 1047


>emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]
          Length = 2321

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/95 (48%), Positives = 56/95 (58%)
 Frame = +2

Query: 80   DSSFAFEVSPFGGLYDGQTSKDWQSFPSVQVHKISTDVEGSPFTSGLTQKDLKTVPEISH 259
            + SF+FEV     L + +  K WQ F S Q  K S  VEGSP TS L Q D K   EIS 
Sbjct: 956  ERSFSFEVGALADLSEREAGKCWQPF-STQACKTSVIVEGSPSTSVLGQMDPKMAQEISR 1014

Query: 260  GSPQPPVQGITHAGAKGTPERKTRRGSGKSTARES 364
            GSP+    GI    +KGT ERKT+R SGK+T +E+
Sbjct: 1015 GSPRAS-GGIASGSSKGT-ERKTKRASGKATGKET 1047


>emb|CAN74652.1| hypothetical protein VITISV_022991 [Vitis vinifera]
          Length = 1771

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/95 (43%), Positives = 52/95 (54%)
 Frame = +2

Query: 80  DSSFAFEVSPFGGLYDGQTSKDWQSFPSVQVHKISTDVEGSPFTSGLTQKDLKTVPEISH 259
           + SF+FEV     L + +      SF  +        VEGSP TS L Q D K   EIS 
Sbjct: 252 ERSFSFEVGALADLPEREAEFFGLSFLKI--------VEGSPSTSVLGQMDPKMAQEISR 303

Query: 260 GSPQPPVQGITHAGAKGTPERKTRRGSGKSTARES 364
           GSP+    GIT   +KGT ERKT+R SGK+T +E+
Sbjct: 304 GSPRAS-GGITSGSSKGT-ERKTKRASGKATGKET 336


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