BLASTX nr result

ID: Panax21_contig00017235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017235
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283773.1| PREDICTED: uncharacterized protein LOC100247...   322   5e-86
emb|CAN66716.1| hypothetical protein VITISV_041185 [Vitis vinifera]   322   5e-86
ref|XP_002528431.1| conserved hypothetical protein [Ricinus comm...   311   7e-83
ref|XP_002284056.1| PREDICTED: uncharacterized protein LOC100243...   302   5e-80
ref|XP_002312087.1| predicted protein [Populus trichocarpa] gi|2...   299   3e-79

>ref|XP_002283773.1| PREDICTED: uncharacterized protein LOC100247953 isoform 1 [Vitis
           vinifera] gi|359486813|ref|XP_003633477.1| PREDICTED:
           uncharacterized protein LOC100247953 isoform 2 [Vitis
           vinifera] gi|296086249|emb|CBI31690.3| unnamed protein
           product [Vitis vinifera]
          Length = 493

 Score =  322 bits (825), Expect = 5e-86
 Identities = 154/215 (71%), Positives = 174/215 (80%)
 Frame = +1

Query: 4   LKNIVNLQPKKLLNGSGLNLSTQQPNQANGEGIDLLAACTKRRKNYFTHGSDYDSCLPNI 183
           LKN  N  P+KLLNG+ LNLSTQ  N  NG+ +DL   C KRRK++F HG+D D CLPN 
Sbjct: 274 LKNHTNPHPRKLLNGTSLNLSTQPSNHVNGDVLDLSPVCNKRRKDFFPHGNDDDCCLPN- 332

Query: 184 SQSDRALDTHPIEPHWVNEFTGVMRSSYGPVTAAKTIYEDEKGFLIIVSLPCADLQLAKV 363
                A++ HPIEPHW  EF+GVMR+ YGPVTAAKTIYED++GFLII+SLP ADL+  KV
Sbjct: 333 ----NAMEIHPIEPHWSKEFSGVMRNVYGPVTAAKTIYEDDEGFLIIISLPFADLERVKV 388

Query: 364 TWRNTLSHGIVKISCVSTGCVPIIKRQNRTYKLTDATPEHCPPGEFVREIPLPTRIPEDA 543
           TWRNT SHGIVKISCVST C+P IKR NRT+KLTD TPEHCPPG+F+REIPLPTRIPEDA
Sbjct: 389 TWRNTPSHGIVKISCVSTVCMPFIKRHNRTFKLTDPTPEHCPPGDFIREIPLPTRIPEDA 448

Query: 544 LLEAFGDATGTMLEINVPKHHVGPEEHEVRVCLRP 648
            LEA+ D TGTMLEI VPK  VGPEEHEVRVCLRP
Sbjct: 449 KLEAYRDETGTMLEIVVPKQRVGPEEHEVRVCLRP 483


>emb|CAN66716.1| hypothetical protein VITISV_041185 [Vitis vinifera]
          Length = 493

 Score =  322 bits (825), Expect = 5e-86
 Identities = 154/215 (71%), Positives = 174/215 (80%)
 Frame = +1

Query: 4   LKNIVNLQPKKLLNGSGLNLSTQQPNQANGEGIDLLAACTKRRKNYFTHGSDYDSCLPNI 183
           LKN  N  P+KLLNG+ LNLSTQ  N  NG+ +DL   C KRRK++F HG+D D CLPN 
Sbjct: 274 LKNHTNPHPRKLLNGTSLNLSTQPSNHVNGDVLDLSPVCNKRRKDFFPHGNDDDCCLPN- 332

Query: 184 SQSDRALDTHPIEPHWVNEFTGVMRSSYGPVTAAKTIYEDEKGFLIIVSLPCADLQLAKV 363
                A++ HPIEPHW  EF+GVMR+ YGPVTAAKTIYED++GFLII+SLP ADL+  KV
Sbjct: 333 ----NAMEIHPIEPHWSKEFSGVMRNVYGPVTAAKTIYEDDEGFLIIISLPFADLERVKV 388

Query: 364 TWRNTLSHGIVKISCVSTGCVPIIKRQNRTYKLTDATPEHCPPGEFVREIPLPTRIPEDA 543
           TWRNT SHGIVKISCVST C+P IKR NRT+KLTD TPEHCPPG+F+REIPLPTRIPEDA
Sbjct: 389 TWRNTPSHGIVKISCVSTVCMPFIKRHNRTFKLTDPTPEHCPPGDFIREIPLPTRIPEDA 448

Query: 544 LLEAFGDATGTMLEINVPKHHVGPEEHEVRVCLRP 648
            LEA+ D TGTMLEI VPK  VGPEEHEVRVCLRP
Sbjct: 449 KLEAYRDETGTMLEIVVPKQRVGPEEHEVRVCLRP 483


>ref|XP_002528431.1| conserved hypothetical protein [Ricinus communis]
           gi|223532107|gb|EEF33914.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 500

 Score =  311 bits (798), Expect = 7e-83
 Identities = 149/216 (68%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
 Frame = +1

Query: 4   LKNIVNLQPKKLLNGSGLNLSTQQPNQANGEGIDLLAACTKRRKNYFTHGSDYDSCLPNI 183
           LK+  N  P+KLLNG+GLNLSTQ  +  NGE +DL   C KR+K+Y  HG+D D CL N 
Sbjct: 276 LKSNGNSHPRKLLNGTGLNLSTQSSDHGNGETMDLSPVCHKRKKDYLPHGND-DECLANN 334

Query: 184 SQSDRA-LDTHPIEPHWVNEFTGVMRSSYGPVTAAKTIYEDEKGFLIIVSLPCADLQLAK 360
           S  +R  ++ HP+EP W+NEF+GVM++ YGPVTAAKTIYED++ FLII+SLP ADLQ  K
Sbjct: 335 SHGERVDMNIHPVEPAWINEFSGVMKNVYGPVTAAKTIYEDDESFLIIISLPFADLQRVK 394

Query: 361 VTWRNTLSHGIVKISCVSTGCVPIIKRQNRTYKLTDATPEHCPPGEFVREIPLPTRIPED 540
           VTWRNT  HGIVKISC+ST C+P IKR +RT+KLTD TPEHCPPGEF+REIPLP RIPED
Sbjct: 395 VTWRNTNLHGIVKISCISTACMPFIKRHDRTFKLTDPTPEHCPPGEFIREIPLPNRIPED 454

Query: 541 ALLEAFGDATGTMLEINVPKHHVGPEEHEVRVCLRP 648
           A LEA+ D TGTMLEI VPKH VGPEEHEVRVCLRP
Sbjct: 455 AKLEAYRDETGTMLEIIVPKHRVGPEEHEVRVCLRP 490


>ref|XP_002284056.1| PREDICTED: uncharacterized protein LOC100243332 [Vitis vinifera]
          Length = 500

 Score =  302 bits (773), Expect = 5e-80
 Identities = 149/218 (68%), Positives = 175/218 (80%), Gaps = 2/218 (0%)
 Frame = +1

Query: 1   ALKNIVNLQPKKLLNGSGLNLSTQQPNQANGEGIDLLAACTKRRKNYFTHGSDYDSCLPN 180
           +LKN  + QPKKLLNGSGLNLST+  N  NG GIDL+  C KR+K++F HG+D D  L  
Sbjct: 273 SLKNNPHPQPKKLLNGSGLNLSTRLSNHVNGGGIDLVTICNKRKKDFFPHGNDEDCYLLI 332

Query: 181 ISQSDRALDT--HPIEPHWVNEFTGVMRSSYGPVTAAKTIYEDEKGFLIIVSLPCADLQL 354
              S+R  DT  H IE  W+N+F+GVMR+  GPVTAAKTIYEDE+G+LII+SLP ADL+ 
Sbjct: 333 NQHSNRVQDTDIHSIELPWLNKFSGVMRNVSGPVTAAKTIYEDEEGYLIIISLPFADLKR 392

Query: 355 AKVTWRNTLSHGIVKISCVSTGCVPIIKRQNRTYKLTDATPEHCPPGEFVREIPLPTRIP 534
            KVTW NTL+HG+VKIS VST C+PIIKR +RT+KLTD  PEHCPPGEF+REIPL TRIP
Sbjct: 393 VKVTWWNTLTHGVVKISSVSTSCMPIIKRNDRTFKLTDPMPEHCPPGEFIREIPLATRIP 452

Query: 535 EDALLEAFGDATGTMLEINVPKHHVGPEEHEVRVCLRP 648
           +DA LEA+GD TGT+LEI VPKH VGPEEHEVRVCLRP
Sbjct: 453 DDAKLEAYGDETGTVLEILVPKHRVGPEEHEVRVCLRP 490


>ref|XP_002312087.1| predicted protein [Populus trichocarpa] gi|222851907|gb|EEE89454.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  299 bits (766), Expect = 3e-79
 Identities = 149/221 (67%), Positives = 173/221 (78%)
 Frame = +1

Query: 1   ALKNIVNLQPKKLLNGSGLNLSTQQPNQANGEGIDLLAACTKRRKNYFTHGSDYDSCLPN 180
           ALK+  N  P+KLLNG+GLNLSTQ  + +NGEGIDL     KR+     HGSD D  L +
Sbjct: 275 ALKSNGNAHPRKLLNGTGLNLSTQSSDHSNGEGIDLSPMSNKRK-----HGSD-DEFLHS 328

Query: 181 ISQSDRALDTHPIEPHWVNEFTGVMRSSYGPVTAAKTIYEDEKGFLIIVSLPCADLQLAK 360
           +      ++ HP+E  W+NEF+GVM++  GPVTAAKTIYED+K FL+IVSLP ADLQ  K
Sbjct: 329 VD-----MNIHPVERTWLNEFSGVMKNVNGPVTAAKTIYEDDKAFLVIVSLPFADLQRVK 383

Query: 361 VTWRNTLSHGIVKISCVSTGCVPIIKRQNRTYKLTDATPEHCPPGEFVREIPLPTRIPED 540
           VTWRNT SHGIVKISC+ST C+P IKR +RT+KLTD TPEHCPPGEF+REIPLP  IPED
Sbjct: 384 VTWRNTKSHGIVKISCISTACMPFIKRHDRTFKLTDPTPEHCPPGEFIREIPLPNLIPED 443

Query: 541 ALLEAFGDATGTMLEINVPKHHVGPEEHEVRVCLRPSPWSE 663
           A LEA+ D TGT+LEI VPKH VGPEEHEVRVCLRPSPWSE
Sbjct: 444 AKLEAYRDETGTVLEIIVPKHRVGPEEHEVRVCLRPSPWSE 484


Top