BLASTX nr result
ID: Panax21_contig00017229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017229
(1684 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi... 771 0.0
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,... 769 0.0
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi... 740 0.0
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2... 738 0.0
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi... 735 0.0
>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 771 bits (1992), Expect = 0.0
Identities = 387/511 (75%), Positives = 438/511 (85%), Gaps = 1/511 (0%)
Frame = +2
Query: 2 IRRTLSIHWTTHPIQSNFN-FCTQAADNXXXXXXXXXXXXXPKSLCLRIEGLPKGESVGS 178
IRRT+ + I +FN F T+ A KSL RIE LP+GE VG
Sbjct: 40 IRRTVVFSSPVNQIAYSFNPFGTETAALSFEESSKPNQEEESKSLSWRIEKLPRGEPVGL 99
Query: 179 AFQSWMGDGFPIHRGDIFHTINRLRKRKSNKIALEVMEWVIRERPYRPKQLDYSYLLEFT 358
AFQSWMG+G PIHRG IFH INRLRK K NK ALEVMEWV+RERPYRPK+LDYSYLLEFT
Sbjct: 100 AFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFT 159
Query: 359 TKLHGVSQGERLFSRVPSEFQTELLYNNLVIACLDKGKITLSLAYMRKMRELGHPISHLI 538
TKLHG+SQGE+LFS VP EFQ ELLYNNLVIACLDKG I LSLAYM+KMRELGHPIS+L+
Sbjct: 160 TKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLV 219
Query: 539 FNRLIILHSSPKRKKAIPKILMQMKADKVAPHVSTYNILLKIEANQHNIEGLVKVYGDMK 718
FNRLIILHSSP R+K IP+IL QMKADKVA HVSTYNIL+KIEAN+HNIEGLVKV+G+MK
Sbjct: 220 FNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMK 279
Query: 719 RAKVEPNEISYCILATAHAVARLYTVCEAYVEAVEKSMTGNNWSTLDILVILYGYLGKRK 898
+ +VEPNE+SYC+LATAHAVA+LYTV EAYVEAVEKS+TGNNWSTLD+L+ILYGYLGK
Sbjct: 280 QQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKPT 339
Query: 899 ELERIWGAVQKLPHVTSKSFVLAIEAFGKIGELSRSEELWLEMKSHKGLKSTEQFNSLIS 1078
+LER WG VQ+LPHV SKS++LAIEAFG+IG+L+R+EELWLE+KS K LKSTEQFNS+IS
Sbjct: 340 DLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQFNSMIS 399
Query: 1079 VYCKHGFISKATGLYREIEKIGCKPNAITYRHLALGCLKAGLVKEALKTLELGMDLTTST 1258
VY KHGFI KA+GL+RE+E GCK NAITYR+LALGCLKAGL++EALKTLELG LT ST
Sbjct: 400 VYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKGLTIST 459
Query: 1259 TIRRSTPWLETTYSMIEIFAEKGDVENAEKLFEELKNANYTRYTFVYNTLIKAYVKAKIY 1438
IR+S PWLETT S++EIF+E GDVENAEKLFEELK ANYTRYTFVYNTLIKAYVKAK+Y
Sbjct: 460 RIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVY 519
Query: 1439 DKNLLRRTILGGARPDSETYSLLKLIEQFRT 1531
D NLLRR ILGGARPD+ETYSL+KL EQF+T
Sbjct: 520 DPNLLRRMILGGARPDAETYSLMKLAEQFQT 550
>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 521
Score = 770 bits (1987), Expect = 0.0
Identities = 381/511 (74%), Positives = 435/511 (85%), Gaps = 1/511 (0%)
Frame = +2
Query: 2 IRRTLSIHWTTHPIQSNFNF-CTQAADNXXXXXXXXXXXXXPKSLCLRIEGLPKGESVGS 178
I RTLSI + H NFNF CTQ D PKSL LRIE LP+GE +G
Sbjct: 16 IHRTLSIAYQNH---YNFNFLCTQTTD--VKILEPEEQEENPKSLSLRIEKLPRGEPIGL 70
Query: 179 AFQSWMGDGFPIHRGDIFHTINRLRKRKSNKIALEVMEWVIRERPYRPKQLDYSYLLEFT 358
AFQSWM +GFPIHRGD+FH INRLRK K NK ALEVMEWVIRERPYRPK+LDYSYLLEFT
Sbjct: 71 AFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPKELDYSYLLEFT 130
Query: 359 TKLHGVSQGERLFSRVPSEFQTELLYNNLVIACLDKGKITLSLAYMRKMRELGHPISHLI 538
TKLHG+S GE+LF+R+P+EFQ ELLYNNLVIACL+KG I LSL YM+KMRELGHPISHLI
Sbjct: 131 TKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLI 190
Query: 539 FNRLIILHSSPKRKKAIPKILMQMKADKVAPHVSTYNILLKIEANQHNIEGLVKVYGDMK 718
FNRLIILHSSP R+K IPKIL QMKADKV HVSTYNIL+KIEAN+HN+EGL+KV+G+MK
Sbjct: 191 FNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEMK 250
Query: 719 RAKVEPNEISYCILATAHAVARLYTVCEAYVEAVEKSMTGNNWSTLDILVILYGYLGKRK 898
R +VEPNE+S+CILA AHAVARLYTV EAYVEAVEKS TG+NWSTLD+L+ILYGYL K K
Sbjct: 251 RLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWSTLDVLIILYGYLRKGK 310
Query: 899 ELERIWGAVQKLPHVTSKSFVLAIEAFGKIGELSRSEELWLEMKSHKGLKSTEQFNSLIS 1078
+L+RIWG V++LPHV SKS++LAIEAFG+IG+L R+EELWLEMKS KGLKSTEQFNS++S
Sbjct: 311 KLDRIWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQFNSMLS 370
Query: 1079 VYCKHGFISKATGLYREIEKIGCKPNAITYRHLALGCLKAGLVKEALKTLELGMDLTTST 1258
+YCK G + KAT ++RE+++ GCKPNAIT+RHLALGCLKA LV+EALKTLE+GMD TTS
Sbjct: 371 IYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVEEALKTLEMGMDFTTSN 430
Query: 1259 TIRRSTPWLETTYSMIEIFAEKGDVENAEKLFEELKNANYTRYTFVYNTLIKAYVKAKIY 1438
I+ S PWLETT+S++EIFAEKGDV NAEK FEEL A Y RYTFVYNTLIKAYVKAK+Y
Sbjct: 431 KIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTFVYNTLIKAYVKAKVY 490
Query: 1439 DKNLLRRTILGGARPDSETYSLLKLIEQFRT 1531
LLRR ILGGARPD+ETYSL+KLIEQF T
Sbjct: 491 VPYLLRRMILGGARPDAETYSLIKLIEQFNT 521
>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 740 bits (1911), Expect = 0.0
Identities = 367/502 (73%), Positives = 426/502 (84%), Gaps = 1/502 (0%)
Frame = +2
Query: 29 TTHPIQSNFNFCTQAADNXXXXXXXXXXXXXPKSLCLRIEGLPKGESVGSAFQSWMGDGF 208
+T P + NF CTQ N PK L LRIE +PKGE VG AF+SWMGDGF
Sbjct: 28 STIPFRFNF-LCTQIPGNLSPNVLESELEE-PKCLSLRIERIPKGELVGYAFRSWMGDGF 85
Query: 209 PIHRGDIFHTINRLRKRKSNKIALEVMEWVIRERPYRPKQLDYSYLLEFTTKLHGVSQGE 388
PIHRGDIFH INRLRK + NK ALEVMEWVIRE+PYR +LDYSYLLEFT K HG+SQGE
Sbjct: 86 PIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGE 145
Query: 389 RLFSRVPSEFQTELLYNNLVIACLDKGKITLSLAYMRKMRELGHPISHLIFNRLIILHSS 568
+LFS +P EFQ ELL+NNLVIACLDKG I LSLAYMRKMRE+GH ISHL+FNRLIILHSS
Sbjct: 146 KLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHSS 205
Query: 569 PKRKKAIPKILMQMKADKVAPHVSTYNILLKIEANQHNIEGLVKVYGDMKRAKVEPNEIS 748
+R+K IPKIL QMKADKV HVSTYNIL+KIEAN+HNIEGL++V+ DM+RAKVEPNE+S
Sbjct: 206 FRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRRAKVEPNEVS 265
Query: 749 YCILATAHAVARLYTVCEAYVEAVEKSMTGNNWSTLDILVILYGYLGKRKELERIWGAVQ 928
YCI+ATAHAVA+LYTV EAYVEA+EKS+ GNNWST D+L+ILYGYL K KELER WG +Q
Sbjct: 266 YCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGYLNKEKELERTWGIIQ 325
Query: 929 KLPHVTSKSFVLAIEAFGKIGELSRSEELWLEMKSHKGLKSTEQFNSLISVYCKHGFISK 1108
PH+ SKSF+LAIEAFG+IG LSR+EELWLEMK+ +G+K+T+QFNS++SVYC+HG I K
Sbjct: 326 GFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLIKK 385
Query: 1109 ATGLYREIEKIGCKPNAITYRHLALGCLKAGLVKEALKTLELGMDLTTSTTI-RRSTPWL 1285
AT ++R+IE GCKPNAIT+RHLA GCLKAGLV+EALKTL+LG + T+ST I R+STPWL
Sbjct: 386 ATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSNTTSSTKIVRKSTPWL 445
Query: 1286 ETTYSMIEIFAEKGDVENAEKLFEELKNANYTRYTFVYNTLIKAYVKAKIYDKNLLRRTI 1465
ETT SMIEI AE+GD+EN EKLF+ELK A YTRYTFVYNTLIKAYVKAKI++ NLLRR I
Sbjct: 446 ETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKIHNPNLLRRMI 505
Query: 1466 LGGARPDSETYSLLKLIEQFRT 1531
+GGARPDSETYSL+KL EQF++
Sbjct: 506 VGGARPDSETYSLIKLSEQFQS 527
>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
predicted protein [Populus trichocarpa]
Length = 525
Score = 738 bits (1906), Expect = 0.0
Identities = 362/469 (77%), Positives = 411/469 (87%)
Frame = +2
Query: 122 PKSLCLRIEGLPKGESVGSAFQSWMGDGFPIHRGDIFHTINRLRKRKSNKIALEVMEWVI 301
PK L RIE LP+GESVG AFQSWMG+GFPIHRGD+FHTINRLRK + NK ALEVMEWV+
Sbjct: 56 PKCLSSRIEKLPRGESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVV 115
Query: 302 RERPYRPKQLDYSYLLEFTTKLHGVSQGERLFSRVPSEFQTELLYNNLVIACLDKGKITL 481
RERPYR K+LDYSYLLEFTTK HG+S GE+LF VPSEFQ ELLYNNLVI+CL+KG I L
Sbjct: 116 RERPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRL 175
Query: 482 SLAYMRKMRELGHPISHLIFNRLIILHSSPKRKKAIPKILMQMKADKVAPHVSTYNILLK 661
SL YM+KMRE GHPIS+LIFNRLIILHSSP +K IPKIL QM+ADKV PHVSTYNIL+K
Sbjct: 176 SLDYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMK 235
Query: 662 IEANQHNIEGLVKVYGDMKRAKVEPNEISYCILATAHAVARLYTVCEAYVEAVEKSMTGN 841
IEAN+HNI+GLVKV+ DMKR KVEPNE+S+CILATAHA ARLYTV EAYVEAVEKS +G+
Sbjct: 236 IEANEHNIDGLVKVFNDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGD 295
Query: 842 NWSTLDILVILYGYLGKRKELERIWGAVQKLPHVTSKSFVLAIEAFGKIGELSRSEELWL 1021
NWSTLD+L+ILYG+LGK KELER WG V +LPHV SKS++LAIEA+GKIG+LSR+EELWL
Sbjct: 296 NWSTLDVLIILYGHLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWL 355
Query: 1022 EMKSHKGLKSTEQFNSLISVYCKHGFISKATGLYREIEKIGCKPNAITYRHLALGCLKAG 1201
EMKS GL+STEQFNS++SVYCKHG I KATG +RE+E GCK N+IT+RHLALGCLKA
Sbjct: 356 EMKSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKAN 415
Query: 1202 LVKEALKTLELGMDLTTSTTIRRSTPWLETTYSMIEIFAEKGDVENAEKLFEELKNANYT 1381
LV+EALKTLE+G +LTTS ++ STPWLETT S+IE+FAEKGDV N EKLFEEL A Y
Sbjct: 416 LVEEALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYI 475
Query: 1382 RYTFVYNTLIKAYVKAKIYDKNLLRRTILGGARPDSETYSLLKLIEQFR 1528
R+TFV+N LIKAYVKAKIY NLLRR ILGGARPD+ETYSL+KL EQFR
Sbjct: 476 RHTFVFNILIKAYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQFR 524
>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 735 bits (1898), Expect = 0.0
Identities = 359/491 (73%), Positives = 415/491 (84%)
Frame = +2
Query: 59 FCTQAADNXXXXXXXXXXXXXPKSLCLRIEGLPKGESVGSAFQSWMGDGFPIHRGDIFHT 238
FCTQA N SL RIE LPKGESVGSAF+SWM DG P+H GDIFH
Sbjct: 30 FCTQATQNHD-------------SLSRRIEKLPKGESVGSAFRSWMRDGLPVHGGDIFHA 76
Query: 239 INRLRKRKSNKIALEVMEWVIRERPYRPKQLDYSYLLEFTTKLHGVSQGERLFSRVPSEF 418
INRLRK NK AL+VMEWVIRERPYRP++LDYSYL+EFTTKLHG+S GE+LFSR+P EF
Sbjct: 77 INRLRKLNMNKRALQVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEF 136
Query: 419 QTELLYNNLVIACLDKGKITLSLAYMRKMRELGHPISHLIFNRLIILHSSPKRKKAIPKI 598
Q+ELLYNNLVIACLDKG I LSL YM+KMRELG PISHL+FNRLIILHSSP R+K IPK+
Sbjct: 137 QSELLYNNLVIACLDKGVIKLSLEYMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKL 196
Query: 599 LMQMKADKVAPHVSTYNILLKIEANQHNIEGLVKVYGDMKRAKVEPNEISYCILATAHAV 778
L QMKADKV PHVSTYNIL+KIEAN+HN+E LVKV+G MK A+VEPNEISYCILA AHAV
Sbjct: 197 LTQMKADKVTPHVSTYNILMKIEANEHNLENLVKVFGRMKVAQVEPNEISYCILAIAHAV 256
Query: 779 ARLYTVCEAYVEAVEKSMTGNNWSTLDILVILYGYLGKRKELERIWGAVQKLPHVTSKSF 958
ARLYT EAYVEAVEKS+TGNNWSTLD+L++LYGYLG +KELER+W +Q+LP + SKS+
Sbjct: 257 ARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIQELPSIRSKSY 316
Query: 959 VLAIEAFGKIGELSRSEELWLEMKSHKGLKSTEQFNSLISVYCKHGFISKATGLYREIEK 1138
+LAIEAFG+IG+L+R+EE+WLEMKS KGLKS EQFNS++SVYCKHGFI +A LY+ ++
Sbjct: 317 MLAIEAFGRIGQLNRAEEIWLEMKSTKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKA 376
Query: 1139 IGCKPNAITYRHLALGCLKAGLVKEALKTLELGMDLTTSTTIRRSTPWLETTYSMIEIFA 1318
GCKPNAITY LALGCLK+G+ ++ALKTL+LG+ LT S +R STPWLETT S++EIFA
Sbjct: 377 SGCKPNAITYHQLALGCLKSGMAEQALKTLDLGLRLTISKRVRNSTPWLETTLSIVEIFA 436
Query: 1319 EKGDVENAEKLFEELKNANYTRYTFVYNTLIKAYVKAKIYDKNLLRRTILGGARPDSETY 1498
EKGDV N E+LFEE A Y RYTFVYNTLIKAYVKAKIY+ NLL+R ILGGARPD+ETY
Sbjct: 437 EKGDVGNVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYNPNLLKRMILGGARPDAETY 496
Query: 1499 SLLKLIEQFRT 1531
SLLK+ EQF+T
Sbjct: 497 SLLKIAEQFQT 507