BLASTX nr result

ID: Panax21_contig00017226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017226
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteo...   288   1e-86
ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteo...   286   2e-86
ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteo...   284   1e-85
ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteo...   271   3e-80
ref|XP_002329885.1| predicted protein [Populus trichocarpa] gi|2...   282   7e-80

>ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Glycine max]
          Length = 312

 Score =  288 bits (736), Expect(2) = 1e-86
 Identities = 138/155 (89%), Positives = 149/155 (96%)
 Frame = -1

Query: 822 YRTPGEGTWQWVDLWNALYRERVIFIGEEINEEFSNQILATMLYLDSIESSKRMYMYINS 643
           YRTPGEGTWQWVD+WNALYRERVIFIG+EI+EEFSNQILATMLYLDSIE+SK++YMYIN 
Sbjct: 110 YRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENSKKLYMYING 169

Query: 642 PGGDLTPTMAIYDTMQSLQSPVGTNCVGYAYNLAGFLLAAGEKGNRFAMPLSRIALQSPA 463
           PGGDLTP+MAIYDTMQSLQSPV T+CVGYAY+LA FLLAAGEKGNR AMPLSR+AL SPA
Sbjct: 170 PGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKGNRSAMPLSRVALTSPA 229

Query: 462 GAARGQADDIQNEANELLRIRDYLFKELSQKTGQP 358
           GAARGQADDIQNEANELLRIRDYLF EL+QKTGQP
Sbjct: 230 GAARGQADDIQNEANELLRIRDYLFNELAQKTGQP 264



 Score = 59.3 bits (142), Expect(2) = 1e-86
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 247 EYGLIDRIVRPPRIKADAPRKDAGTGLG 164
           EYGLIDRIVRPPRIKADAPRK+AGTGLG
Sbjct: 285 EYGLIDRIVRPPRIKADAPRKEAGTGLG 312


>ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic [Vitis vinifera]
           gi|147794105|emb|CAN62361.1| hypothetical protein
           VITISV_031921 [Vitis vinifera]
           gi|297742668|emb|CBI34817.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  286 bits (733), Expect(2) = 2e-86
 Identities = 137/155 (88%), Positives = 149/155 (96%)
 Frame = -1

Query: 822 YRTPGEGTWQWVDLWNALYRERVIFIGEEINEEFSNQILATMLYLDSIESSKRMYMYINS 643
           YRTPGEGTWQWVDLWNALYRERVI+IG+ I+EEFSNQ+LATMLYLDSIESSKRM+ YINS
Sbjct: 89  YRTPGEGTWQWVDLWNALYRERVIYIGQHIDEEFSNQLLATMLYLDSIESSKRMFFYINS 148

Query: 642 PGGDLTPTMAIYDTMQSLQSPVGTNCVGYAYNLAGFLLAAGEKGNRFAMPLSRIALQSPA 463
           PGGDLTP++AIYDTMQSL+SPVGTNC+G+AYNLA FLLAAGEKGNR AMPLSRIALQSPA
Sbjct: 149 PGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYNLATFLLAAGEKGNRLAMPLSRIALQSPA 208

Query: 462 GAARGQADDIQNEANELLRIRDYLFKELSQKTGQP 358
           GAARGQADDI+NEANELLRIRDYLF EL+ KTGQP
Sbjct: 209 GAARGQADDIRNEANELLRIRDYLFSELANKTGQP 243



 Score = 59.3 bits (142), Expect(2) = 2e-86
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 247 EYGLIDRIVRPPRIKADAPRKDAGTGLG 164
           EYGLIDRI+RPPR+KADAPRKDAGTGLG
Sbjct: 264 EYGLIDRILRPPRVKADAPRKDAGTGLG 291


>ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Glycine max]
          Length = 285

 Score =  284 bits (726), Expect(2) = 1e-85
 Identities = 136/155 (87%), Positives = 148/155 (95%)
 Frame = -1

Query: 822 YRTPGEGTWQWVDLWNALYRERVIFIGEEINEEFSNQILATMLYLDSIESSKRMYMYINS 643
           YRTPGEGTWQWVD+WNALYRERVIFIG+EI+EEFSNQILATMLYLDSI++SK++YMYIN 
Sbjct: 83  YRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIDNSKKLYMYING 142

Query: 642 PGGDLTPTMAIYDTMQSLQSPVGTNCVGYAYNLAGFLLAAGEKGNRFAMPLSRIALQSPA 463
           PGGDLTP+MAIYDTMQSLQSPV T+CVGYAY+LA FLLAAGEK NR AMPLSR+AL SPA
Sbjct: 143 PGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKSNRSAMPLSRVALTSPA 202

Query: 462 GAARGQADDIQNEANELLRIRDYLFKELSQKTGQP 358
           GAARGQADDIQNEANELLRIRDYLF ELS+KTGQP
Sbjct: 203 GAARGQADDIQNEANELLRIRDYLFNELSKKTGQP 237



 Score = 59.3 bits (142), Expect(2) = 1e-85
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 247 EYGLIDRIVRPPRIKADAPRKDAGTGLG 164
           EYGLIDRIVRPPRIKADAPRK+AGTGLG
Sbjct: 258 EYGLIDRIVRPPRIKADAPRKEAGTGLG 285


>ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Cucumis sativus]
           gi|449523577|ref|XP_004168800.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Cucumis sativus]
          Length = 285

 Score =  271 bits (694), Expect(2) = 3e-80
 Identities = 126/155 (81%), Positives = 147/155 (94%)
 Frame = -1

Query: 822 YRTPGEGTWQWVDLWNALYRERVIFIGEEINEEFSNQILATMLYLDSIESSKRMYMYINS 643
           Y+TPGEG WQWVDLWNALYRERVIFIG+ ++EEFSNQILATMLYLDS+E+SK++Y+YIN 
Sbjct: 83  YKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKLYIYING 142

Query: 642 PGGDLTPTMAIYDTMQSLQSPVGTNCVGYAYNLAGFLLAAGEKGNRFAMPLSRIALQSPA 463
           PGGDLTPT+A+YDTMQSL+SP+ T+C+G AYN+A FLLAAGEKGNR AMPLSRIALQSPA
Sbjct: 143 PGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRIALQSPA 202

Query: 462 GAARGQADDIQNEANELLRIRDYLFKELSQKTGQP 358
           G+ARG+ADDIQNEAN+LL+IRDYLF ELS+KTGQP
Sbjct: 203 GSARGRADDIQNEANQLLKIRDYLFDELSKKTGQP 237



 Score = 53.9 bits (128), Expect(2) = 3e-80
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -3

Query: 247 EYGLIDRIVRPPRIKADAPRKDAGTGLG 164
           EYGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 258 EYGLIDRIARPARIKADAPRKDDGTGLG 285


>ref|XP_002329885.1| predicted protein [Populus trichocarpa] gi|222871122|gb|EEF08253.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  282 bits (722), Expect(2) = 7e-80
 Identities = 133/155 (85%), Positives = 148/155 (95%)
 Frame = -1

Query: 822 YRTPGEGTWQWVDLWNALYRERVIFIGEEINEEFSNQILATMLYLDSIESSKRMYMYINS 643
           YRTPGEGTWQWVD+WNALYRER++FIG+ I+EEFSNQILATMLYLD+I+ SKRMY+YIN 
Sbjct: 77  YRTPGEGTWQWVDIWNALYRERILFIGQNIDEEFSNQILATMLYLDTIDDSKRMYLYING 136

Query: 642 PGGDLTPTMAIYDTMQSLQSPVGTNCVGYAYNLAGFLLAAGEKGNRFAMPLSRIALQSPA 463
           PGGDLTP++AIYDTMQSL+SPVGT+CVG+AYNLAGFLL AGEKGNR AMPLSRIALQSPA
Sbjct: 137 PGGDLTPSLAIYDTMQSLKSPVGTHCVGFAYNLAGFLLTAGEKGNRSAMPLSRIALQSPA 196

Query: 462 GAARGQADDIQNEANELLRIRDYLFKELSQKTGQP 358
           GAARGQADDI NEANELLRIRDYL+ ELS+KTGQP
Sbjct: 197 GAARGQADDICNEANELLRIRDYLYNELSKKTGQP 231



 Score = 42.0 bits (97), Expect(2) = 7e-80
 Identities = 19/28 (67%), Positives = 20/28 (71%)
 Frame = -3

Query: 247 EYGLIDRIVRPPRIKADAPRKDAGTGLG 164
           EYGLIDRI+RPPRI  D    DA  GLG
Sbjct: 252 EYGLIDRIIRPPRIDDDVGPSDASAGLG 279


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