BLASTX nr result

ID: Panax21_contig00017188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017188
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517855.1| DNA binding protein, putative [Ricinus commu...   170   2e-40
ref|XP_002310413.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40
ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like...   169   5e-40
emb|CBI21901.3| unnamed protein product [Vitis vinifera]              169   5e-40
ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like...   169   5e-40

>ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
           gi|223542837|gb|EEF44373.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 424

 Score =  170 bits (431), Expect = 2e-40
 Identities = 92/112 (82%), Positives = 96/112 (85%), Gaps = 8/112 (7%)
 Frame = +2

Query: 413 LNNQGEEIVSKRDESVAPP--KKAADHKGRKSSK------NHQGKRKVKVDWTPELHRRF 568
           L+ +GEEIVSKRDESV      K +D KGRKSS       NHQGKRKVKVDWTP+LHRRF
Sbjct: 104 LSTRGEEIVSKRDESVVVNLVSKESD-KGRKSSSTQAKNSNHQGKRKVKVDWTPDLHRRF 162

Query: 569 VQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 724
           VQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA
Sbjct: 163 VQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 214


>ref|XP_002310413.1| predicted protein [Populus trichocarpa] gi|222853316|gb|EEE90863.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  170 bits (430), Expect = 3e-40
 Identities = 90/111 (81%), Positives = 94/111 (84%), Gaps = 7/111 (6%)
 Frame = +2

Query: 413 LNNQGEEIVSKRDESVA--PPKKAADHKGRKSS-----KNHQGKRKVKVDWTPELHRRFV 571
           L+ +GEEIVSKRDESV   P       KGRKS+      N+QGKRKVKVDWTPELHRRFV
Sbjct: 113 LSTRGEEIVSKRDESVVVNPVPNKDGEKGRKSAAHAKNNNNQGKRKVKVDWTPELHRRFV 172

Query: 572 QAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 724
           QAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA
Sbjct: 173 QAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 223


>ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
          Length = 436

 Score =  169 bits (428), Expect = 5e-40
 Identities = 89/110 (80%), Positives = 93/110 (84%), Gaps = 7/110 (6%)
 Frame = +2

Query: 416 NNQGEEIVSKRDES--VAPPKKAADHKGRKSSK-----NHQGKRKVKVDWTPELHRRFVQ 574
           ++QGEEIVSK DES  V  P      KGRKSS      N+QGKRKVKVDWTPELHRRFVQ
Sbjct: 121 SSQGEEIVSKSDESEVVVNPSPKESEKGRKSSNHASRNNNQGKRKVKVDWTPELHRRFVQ 180

Query: 575 AVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 724
           AVEQLGVDKAVPSRILE+MGIDCLTRHNIASHLQKYRSHRKHLLAREAEA
Sbjct: 181 AVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 230


>emb|CBI21901.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  169 bits (428), Expect = 5e-40
 Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 6/109 (5%)
 Frame = +2

Query: 416 NNQGEEIVSKRDESVAP---PKKAADHKGRKSS---KNHQGKRKVKVDWTPELHRRFVQA 577
           +++GEEIVSKR ESVA    PK+    KGRKSS   KN QGKRKVKVDWTPELHRRFVQA
Sbjct: 53  SSRGEEIVSKRSESVATNASPKEV--EKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQA 110

Query: 578 VEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 724
           VEQLGVDKAVPSRILE+MGIDCLTRHNIASHLQKYRSHRKHLLAREAEA
Sbjct: 111 VEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 159


>ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
          Length = 432

 Score =  169 bits (428), Expect = 5e-40
 Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 6/109 (5%)
 Frame = +2

Query: 416 NNQGEEIVSKRDESVAP---PKKAADHKGRKSS---KNHQGKRKVKVDWTPELHRRFVQA 577
           +++GEEIVSKR ESVA    PK+    KGRKSS   KN QGKRKVKVDWTPELHRRFVQA
Sbjct: 114 SSRGEEIVSKRSESVATNASPKEV--EKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQA 171

Query: 578 VEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 724
           VEQLGVDKAVPSRILE+MGIDCLTRHNIASHLQKYRSHRKHLLAREAEA
Sbjct: 172 VEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEA 220


Top