BLASTX nr result

ID: Panax21_contig00017187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017187
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...   194   1e-47
emb|CBI35393.3| unnamed protein product [Vitis vinifera]              191   9e-47
ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis v...   191   9e-47
ref|XP_004168904.1| PREDICTED: transmembrane protein 53-like, pa...   186   2e-45
ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cu...   186   2e-45

>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  194 bits (492), Expect = 1e-47
 Identities = 96/155 (61%), Positives = 113/155 (72%)
 Frame = +3

Query: 3   VWASGFSAAFLKKQSVATKGHMITNERGLEVSGGTKGFVEAKPAFTXXXXXXXXXXXXXX 182
           VWASGFSAAFLKK SVA+K H+ + E  +EVS G K FVE KPA T              
Sbjct: 284 VWASGFSAAFLKKNSVASKVHLNSRESSVEVSVGRKTFVEPKPAATEAALLVILEKFFGV 343

Query: 183 XXXXPAVNRRLTTVMGQLKSGQPSCPQLYIYSSAVKVIPTASVESFIAEQQRSGREVRAC 362
               P VNRRL+ V+  L SGQP+CPQLYIYSSA +VIP  SVE+FI EQ++ G EVRAC
Sbjct: 344 VLNLPTVNRRLSDVLSLLSSGQPTCPQLYIYSSADRVIPARSVETFIEEQRKVGHEVRAC 403

Query: 363 NFISTPHVDHFRNEPYLYTSQLTQFMEDCVLTCCK 467
           NF+STPHVDHFRN+P LY +QL+QF++DCVLTCCK
Sbjct: 404 NFVSTPHVDHFRNDPKLYGTQLSQFLDDCVLTCCK 438


>emb|CBI35393.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  191 bits (484), Expect = 9e-47
 Identities = 96/155 (61%), Positives = 112/155 (72%)
 Frame = +3

Query: 3   VWASGFSAAFLKKQSVATKGHMITNERGLEVSGGTKGFVEAKPAFTXXXXXXXXXXXXXX 182
           VWASGFSAAFLK +SVATKG +  +E G+E     K   E KPA T              
Sbjct: 219 VWASGFSAAFLKTRSVATKGTIRYDESGMEEFVDRKAVAEPKPAITEAALLVVLEKFFQV 278

Query: 183 XXXXPAVNRRLTTVMGQLKSGQPSCPQLYIYSSAVKVIPTASVESFIAEQQRSGREVRAC 362
               P+VNRRL+ V+GQL  GQP+CPQLYIYSSA +VIP  SVE+FI EQ+++GREVRAC
Sbjct: 279 VLNLPSVNRRLSDVLGQLSLGQPNCPQLYIYSSADRVIPAGSVETFIEEQRKAGREVRAC 338

Query: 363 NFISTPHVDHFRNEPYLYTSQLTQFMEDCVLTCCK 467
           NFISTPHVDHFRN+P LYTSQLTQF++D VL CCK
Sbjct: 339 NFISTPHVDHFRNDPKLYTSQLTQFLDDYVLNCCK 373


>ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis vinifera]
          Length = 442

 Score =  191 bits (484), Expect = 9e-47
 Identities = 96/155 (61%), Positives = 112/155 (72%)
 Frame = +3

Query: 3   VWASGFSAAFLKKQSVATKGHMITNERGLEVSGGTKGFVEAKPAFTXXXXXXXXXXXXXX 182
           VWASGFSAAFLK +SVATKG +  +E G+E     K   E KPA T              
Sbjct: 285 VWASGFSAAFLKTRSVATKGTIRYDESGMEEFVDRKAVAEPKPAITEAALLVVLEKFFQV 344

Query: 183 XXXXPAVNRRLTTVMGQLKSGQPSCPQLYIYSSAVKVIPTASVESFIAEQQRSGREVRAC 362
               P+VNRRL+ V+GQL  GQP+CPQLYIYSSA +VIP  SVE+FI EQ+++GREVRAC
Sbjct: 345 VLNLPSVNRRLSDVLGQLSLGQPNCPQLYIYSSADRVIPAGSVETFIEEQRKAGREVRAC 404

Query: 363 NFISTPHVDHFRNEPYLYTSQLTQFMEDCVLTCCK 467
           NFISTPHVDHFRN+P LYTSQLTQF++D VL CCK
Sbjct: 405 NFISTPHVDHFRNDPKLYTSQLTQFLDDYVLNCCK 439


>ref|XP_004168904.1| PREDICTED: transmembrane protein 53-like, partial [Cucumis sativus]
          Length = 194

 Score =  186 bits (473), Expect = 2e-45
 Identities = 95/154 (61%), Positives = 109/154 (70%)
 Frame = +3

Query: 3   VWASGFSAAFLKKQSVATKGHMITNERGLEVSGGTKGFVEAKPAFTXXXXXXXXXXXXXX 182
           VWASGFSAAFLKK SVATKG    +  G+EVS   K  ++ KPA T              
Sbjct: 36  VWASGFSAAFLKKNSVATKGLTTWDNTGMEVSISDKENIKPKPAVTEAALLLVLEKIFGV 95

Query: 183 XXXXPAVNRRLTTVMGQLKSGQPSCPQLYIYSSAVKVIPTASVESFIAEQQRSGREVRAC 362
               P VNRRL+ V+  L S QPSCPQLYIYSSA +VIP  SVESFI EQ+R+GREVRAC
Sbjct: 96  VLNLPTVNRRLSDVLDTLSSSQPSCPQLYIYSSADQVIPAGSVESFIEEQRRAGREVRAC 155

Query: 363 NFISTPHVDHFRNEPYLYTSQLTQFMEDCVLTCC 464
           NF+STPHVDHFRN+P LYT+QL+QF+ DCVLT C
Sbjct: 156 NFVSTPHVDHFRNDPKLYTTQLSQFLADCVLTSC 189


>ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cucumis sativus]
          Length = 442

 Score =  186 bits (473), Expect = 2e-45
 Identities = 95/154 (61%), Positives = 109/154 (70%)
 Frame = +3

Query: 3   VWASGFSAAFLKKQSVATKGHMITNERGLEVSGGTKGFVEAKPAFTXXXXXXXXXXXXXX 182
           VWASGFSAAFLKK SVATKG    +  G+EVS   K  ++ KPA T              
Sbjct: 284 VWASGFSAAFLKKNSVATKGLTTWDNTGMEVSISDKENIKPKPAVTEAALLLVLEKIFGV 343

Query: 183 XXXXPAVNRRLTTVMGQLKSGQPSCPQLYIYSSAVKVIPTASVESFIAEQQRSGREVRAC 362
               P VNRRL+ V+  L S QPSCPQLYIYSSA +VIP  SVESFI EQ+R+GREVRAC
Sbjct: 344 VLNLPTVNRRLSDVLDTLSSSQPSCPQLYIYSSADQVIPAGSVESFIEEQRRAGREVRAC 403

Query: 363 NFISTPHVDHFRNEPYLYTSQLTQFMEDCVLTCC 464
           NF+STPHVDHFRN+P LYT+QL+QF+ DCVLT C
Sbjct: 404 NFVSTPHVDHFRNDPKLYTTQLSQFLADCVLTSC 437


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