BLASTX nr result

ID: Panax21_contig00017176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017176
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC89654.1| RBP42 [Elaeis guineensis]                              206   1e-51
ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816...   204   5e-51
ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik...   204   8e-51
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   203   1e-50

>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/137 (73%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   QSIFSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAA 182
           +++FSS GE+ EA+VI DK TGKSKGYGF+TF+HIDGA+LALKEP+KKIDGR+TVTQLAA
Sbjct: 86  RNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGALLALKEPSKKIDGRMTVTQLAA 145

Query: 183 TGNTGPAG-GVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFA 359
            G T  A   +DVS+RKIYVGN+P ++ S+RLL HFS+YGEIEEGPLGFDKQTGK +GFA
Sbjct: 146 AGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFA 205

Query: 360 FFVYKTEEGAMASLVDP 410
            FVYKT EGA ASLVDP
Sbjct: 206 LFVYKTAEGAGASLVDP 222



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/66 (37%), Positives = 44/66 (66%)
 Frame = +3

Query: 213 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAM 392
           D + RK+++  + +E ++E L   FS+YGE+EE  +  DK TGK+KG+ F  ++  +GA+
Sbjct: 65  DPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGAL 124

Query: 393 ASLVDP 410
            +L +P
Sbjct: 125 LALKEP 130


>ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
          Length = 384

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/137 (72%), Positives = 120/137 (87%)
 Frame = +3

Query: 3   QSIFSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAA 182
           +S+FS  GE+ EAIVI DK TG+SKGYGFV F+H+DGA+LALK+P+KKIDGR+TVTQLAA
Sbjct: 104 RSVFSGFGELDEAIVIMDKATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAA 163

Query: 183 TGNTGPAGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAF 362
            G  GP GG DVS+RK++VGN+PFEISSERLL  F  +GE+EEGPLGFDK +GK++GFAF
Sbjct: 164 AG--GPGGG-DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAF 220

Query: 363 FVYKTEEGAMASLVDPI 413
           FVYKTEEGA ASLV+P+
Sbjct: 221 FVYKTEEGARASLVEPL 237



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/66 (37%), Positives = 44/66 (66%)
 Frame = +3

Query: 213 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAM 392
           D ++RK++V  +  E ++E L   FS +GE++E  +  DK TG++KG+ F V++  +GA+
Sbjct: 83  DSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIMDKATGRSKGYGFVVFRHVDGAI 142

Query: 393 ASLVDP 410
            +L DP
Sbjct: 143 LALKDP 148


>ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
          Length = 384

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/137 (72%), Positives = 119/137 (86%)
 Frame = +3

Query: 3   QSIFSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAA 182
           + +FS+ GE+ EAIVI DK TG+SKGYGFV F H+DGA+LALKEP+KKIDGR+TVTQLAA
Sbjct: 100 RGVFSAFGELDEAIVIIDKATGRSKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAA 159

Query: 183 TGNTGPAGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAF 362
            G  GP GG DVS+RK++VGN+PFEISSERLL  F  +GE+EEGPLGFDK +GK++GFAF
Sbjct: 160 AG--GPGGG-DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAF 216

Query: 363 FVYKTEEGAMASLVDPI 413
           FVYKTEEGA ASLV+P+
Sbjct: 217 FVYKTEEGARASLVEPL 233



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/67 (38%), Positives = 46/67 (68%)
 Frame = +3

Query: 210 VDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGA 389
           +D ++RK++V  +  E ++E L G FSA+GE++E  +  DK TG++KG+ F V+   +GA
Sbjct: 78  LDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKATGRSKGYGFVVFSHVDGA 137

Query: 390 MASLVDP 410
           + +L +P
Sbjct: 138 ILALKEP 144


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/146 (66%), Positives = 121/146 (82%), Gaps = 9/146 (6%)
 Frame = +3

Query: 3   QSIFSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAA 182
           +++FS+ GE+ EA+VI DKNTGKSKGYGFV +KH+DGA+LALKEP+KKIDGR+TVTQLA 
Sbjct: 90  RNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGALLALKEPSKKIDGRVTVTQLAI 149

Query: 183 TGNTGP---------AGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQ 335
            GN+G           G VDV+MRKIYV N+P+E+ S++LL HF+ YGEIEEGPLGFDKQ
Sbjct: 150 AGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQ 209

Query: 336 TGKAKGFAFFVYKTEEGAMASLVDPI 413
           TGK+KGFA FVYKT EGA A+L++P+
Sbjct: 210 TGKSKGFALFVYKTAEGAQAALLEPV 235



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/66 (40%), Positives = 44/66 (66%)
 Frame = +3

Query: 213 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAM 392
           D + RK+++  + +E ++E L   FS YGE+EE  +  DK TGK+KG+ F +YK  +GA+
Sbjct: 69  DATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGAL 128

Query: 393 ASLVDP 410
            +L +P
Sbjct: 129 LALKEP 134


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  203 bits (517), Expect = 1e-50
 Identities = 99/139 (71%), Positives = 119/139 (85%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   QSIFSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAA 182
           + +FS+ GE+ EA+VI DK T KSKGYGFVTFKH+DGA+LALKEP+KKIDGR+TVTQLAA
Sbjct: 88  RQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRMTVTQLAA 147

Query: 183 TGNTGPAGG---VDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKG 353
           +G +GPA     VDVSMRKIYV N+P ++ ++RLL HFS+YGEIEEGPLGFDKQTGK++G
Sbjct: 148 SGLSGPASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRG 207

Query: 354 FAFFVYKTEEGAMASLVDP 410
           FA FVYKT E A A+LVDP
Sbjct: 208 FALFVYKTAEAAQAALVDP 226



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/66 (45%), Positives = 38/66 (57%)
 Frame = +3

Query: 12  FSSLGEVAEAIVITDKNTGKSKGYGFVTFKHIDGAVLALKEPNKKIDGRITVTQLAATGN 191
           FSS GE+ E  +  DK TGKS+G+    +K  + A  AL +P K IDGR  V +LA  G 
Sbjct: 185 FSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIEGK 244

Query: 192 TGPAGG 209
            G  GG
Sbjct: 245 KGKTGG 250



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/66 (37%), Positives = 44/66 (66%)
 Frame = +3

Query: 213 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAM 392
           D++ RK+++  + ++ ++E L   FSAYGE+EE  +  DK T K+KG+ F  +K  +GA+
Sbjct: 67  DLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGAL 126

Query: 393 ASLVDP 410
            +L +P
Sbjct: 127 LALKEP 132


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