BLASTX nr result
ID: Panax21_contig00017175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017175
(751 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFC89654.1| RBP42 [Elaeis guineensis] 157 3e-36
ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik... 155 7e-36
ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816... 155 7e-36
tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-... 154 2e-35
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2... 154 2e-35
>gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 157 bits (396), Expect = 3e-36
Identities = 80/118 (67%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 TVTQLAATGNTGPAG-GVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQT 177
TVTQLAA G T A +DVS+RKIYVGN+P ++ S+RLL HFS+YGEIEEGPLGFDKQT
Sbjct: 139 TVTQLAAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDKQT 198
Query: 178 GKAKGFAFFVYKTEEGARASLVDPIKNIDGHQVNCKFATDGKKGRPG-NVQNAGEPAG 348
GK +GFA FVYKT EGA ASLVDP KNIDGH + CK A DGKK +PG A P G
Sbjct: 199 GKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAIDGKKVKPGAPAAGAAAPVG 256
Score = 65.5 bits (158), Expect = 1e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 52 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAR 231
D + RK+++ + +E ++E L FS+YGE+EE + DK TGK+KG+ F ++ +GA
Sbjct: 65 DPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGAL 124
Query: 232 ASLVDPIKNIDGHQVNCKFATDG 300
+L +P K IDG + A G
Sbjct: 125 LALKEPSKKIDGRMTVTQLAAAG 147
>ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
Length = 384
Score = 155 bits (393), Expect = 7e-36
Identities = 76/105 (72%), Positives = 89/105 (84%)
Frame = +1
Query: 1 TVTQLAATGNTGPAGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTG 180
TVTQLAA G GP GG DVS+RK++VGN+PFEISSERLL F +GE+EEGPLGFDK +G
Sbjct: 153 TVTQLAAAG--GPGGG-DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSG 209
Query: 181 KAKGFAFFVYKTEEGARASLVDPIKNIDGHQVNCKFATDGKKGRP 315
K++GFAFFVYKTEEGARASLV+P+K I+GHQV CK A D KK +P
Sbjct: 210 KSRGFAFFVYKTEEGARASLVEPLKTIEGHQVICKLAVDNKKTKP 254
Score = 67.0 bits (162), Expect = 4e-09
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = +1
Query: 49 VDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGA 228
+D ++RK++V + E ++E L G FSA+GE++E + DK TG++KG+ F V+ +GA
Sbjct: 78 LDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKATGRSKGYGFVVFSHVDGA 137
Query: 229 RASLVDPIKNIDGHQVNCKFATDGKKG 309
+L +P K IDG + A G G
Sbjct: 138 ILALKEPSKKIDGRMTVTQLAAAGGPG 164
>ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
Length = 384
Score = 155 bits (393), Expect = 7e-36
Identities = 76/105 (72%), Positives = 89/105 (84%)
Frame = +1
Query: 1 TVTQLAATGNTGPAGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTG 180
TVTQLAA G GP GG DVS+RK++VGN+PFEISSERLL F +GE+EEGPLGFDK +G
Sbjct: 157 TVTQLAAAG--GPGGG-DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSG 213
Query: 181 KAKGFAFFVYKTEEGARASLVDPIKNIDGHQVNCKFATDGKKGRP 315
K++GFAFFVYKTEEGARASLV+P+K I+GHQV CK A D KK +P
Sbjct: 214 KSRGFAFFVYKTEEGARASLVEPLKTIEGHQVICKLAVDNKKTKP 258
Score = 65.1 bits (157), Expect = 2e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 52 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAR 231
D ++RK++V + E ++E L FS +GE++E + DK TG++KG+ F V++ +GA
Sbjct: 83 DSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIMDKATGRSKGYGFVVFRHVDGAI 142
Query: 232 ASLVDPIKNIDGHQVNCKFATDGKKG 309
+L DP K IDG + A G G
Sbjct: 143 LALKDPSKKIDGRMTVTQLAAAGGPG 168
>tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 1 [Zea mays] gi|414881836|tpg|DAA58967.1| TPA:
heterogeneous nuclear ribonucleoprotein A3-like protein
2 isoform 2 [Zea mays]
Length = 447
Score = 154 bits (388), Expect = 2e-35
Identities = 79/122 (64%), Positives = 93/122 (76%), Gaps = 10/122 (8%)
Frame = +1
Query: 1 TVTQLAATGNTG-PAGGV---------DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEE 150
TVTQLAA G+ G PAGG DVS+RKI+VGN+P +++SERLL HF++YGEIEE
Sbjct: 145 TVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFVGNVPADMASERLLAHFASYGEIEE 204
Query: 151 GPLGFDKQTGKAKGFAFFVYKTEEGARASLVDPIKNIDGHQVNCKFATDGKKGRPGNVQN 330
GPLGFDKQTGK +GFA FVYKT EGA+ASLVD +K IDGHQ+ CK A DGKK + G Q
Sbjct: 205 GPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALDGKKEKQGQSQQ 264
Query: 331 AG 336
G
Sbjct: 265 PG 266
Score = 70.1 bits (170), Expect = 5e-10
Identities = 37/99 (37%), Positives = 57/99 (57%)
Frame = +1
Query: 52 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAR 231
D ++RK++V + +E +S+ L FSAYG++EE + DK TG++KG+ F ++ + A
Sbjct: 71 DPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGFVTFRHADSAV 130
Query: 232 ASLVDPIKNIDGHQVNCKFATDGKKGRPGNVQNAGEPAG 348
+L +P K IDG + A G G P AG PAG
Sbjct: 131 LALKEPSKKIDGRMTVTQLAAAGSAGGP-----AGGPAG 164
>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
predicted protein [Populus trichocarpa]
Length = 310
Score = 154 bits (388), Expect = 2e-35
Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 10/123 (8%)
Frame = +1
Query: 1 TVTQLAATGNTGP---------AGGVDVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEG 153
TVTQLA GN+G G VDV+MRKIYV N+P+E+ S++LL HF+ YGEIEEG
Sbjct: 143 TVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEG 202
Query: 154 PLGFDKQTGKAKGFAFFVYKTEEGARASLVDPIKNIDGHQVNCKFATDGKKGR-PGNVQN 330
PLGFDKQTGK+KGFA FVYKT EGA+A+L++P+K I+G Q+NCK A DGK+GR PG Q
Sbjct: 203 PLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLAIDGKRGRQPGGGQG 262
Query: 331 AGE 339
G+
Sbjct: 263 PGQ 265
Score = 75.5 bits (184), Expect = 1e-11
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +1
Query: 52 DVSMRKIYVGNIPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAR 231
D + RK+++ + +E ++E L FS YGE+EE + DK TGK+KG+ F +YK +GA
Sbjct: 69 DATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGAL 128
Query: 232 ASLVDPIKNIDGHQVNCKFATDGKKGRPGNVQNAGEP 342
+L +P K IDG + A G G N ++ P
Sbjct: 129 LALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANP 165